工藤俊章 (Toshiaki Kudo) - マイポータル

基本情報

所属: 特定国立研究開発法人理化学研究所名誉研究員

研究者番号: 80109793
J-GLOBAL ID: 202401012045546660
researchmap会員ID: R000063555

経歴

2009年 - 現在

特定国立研究開発法人理化学研究所, 名誉研究員
2014年 - 2020年6月

北里大学, 特任教授
2007年9月 - 2013年3月

長崎大学、大学院, 教授
1975年4月 - 2007年8月

特定国立研究開発法人理化学研究所, 主任研究員、副主任研究員、研究員等
1979年 - 1981年

UC Davis, researcher

学歴

委員歴

受賞

論文

269

Seasonal and annual changes in the microbial communities of Ofunato Bay, Japan, based on metagenomics

Atsushi Kobiyama, Jonaira Rashid, Md Shaheed Reza, Yuri Ikeda, Yuichiro Yamada, Toshiaki Kudo, Nanami Mizusawa, Saki Yanagisawa, Daisuke Ikeda, Shigeru Sato …

Scientific Reports 11(1) 17277-17277 2021年12月
Diversity and functions of bacterial communities in water and sediment from the watershed of the Tama River flowing a highly urbanized area

Nanami Mizusawa, Md Shaheed Reza, Chiharu Oikawa, Satomi Kuga, Mariko Iijima, Atsushi Kobiyama, Yuichiro Yamada, Yuri Ikeda, Daisuke Ikeda, Kazuho Ikeo …

Fisheries Science 87(5) 697-715 2021年9月
Marine Metagenomic Sequence Counts of Reads Assigned to Taxa Consistently Proportionate to Read Counts Obtained for per g of Seawater Sample

Toshiaki Kudo, Md Shaheed Reza, Atsushi Kobiyama, Jonaira Rashid, Yuichiro Yamada, Yuri Ikeda, Daisuke Ikeda, Nanami Mizusawa, Saki Yanagisawa, Kazuho Ikeo …

Marine Metagenomics: Technological Aspects and Applications 183-188 2019年1月1日
MetagenomicMethods: From Seawater to the Database

Md Shaheed Reza, Atsushi Kobiyama, Jonaira Rashid, Yuichiro Yamada, Yuri Ikeda, Daisuke Ikeda, Nanami Mizusawa, Saki Yanagisawa, Kazuho Ikeo, Shigeru Sato …

Marine Metagenomics: Technological Aspects and Applications 3-16 2019年1月1日
Seasonal changes in the communities of photosynthetic picoeukaryotes in Ofunato Bay as revealed by shotgun metagenomic sequencing

Jonaira Rashid, Atsushi Kobiyama, Md Shaheed Reza, Yuichiro Yamada, Yuri Ikeda, Daisuke Ikeda, Nanami Mizusawa, Kazuho Ikeo, Shigeru Sato, Takehiko Ogata …

Gene 665 127-132 2018年7月30日
Taxonomic profiles in metagenomic analyses of free-living microbial communities in the Ofunato Bay

Md Shaheed Reza, Atsushi Kobiyama, Yuichiro Yamada, Yuri Ikeda, Daisuke Ikeda, Nanami Mizusawa, Kazuho Ikeo, Shigeru Sato, Takehiko Ogata, Mitsuru Jimbo …

Gene 665 192-200 2018年7月30日
Basin-scale seasonal changes in marine free-living bacterioplankton community in the Ofunato Bay

Md Shaheed Reza, Atsushi Kobiyama, Yuichiro Yamada, Yuri Ikeda, Daisuke Ikeda, Nanami Mizusawa, Kazuho Ikeo, Shigeru Sato, Takehiko Ogata, Mitsuru Jimbo …

Gene 665 185-191 2018年7月30日
Seasonal changes in the abundance of bacterial genes related to dimethylsulfoniopropionate catabolism in seawater from Ofunato Bay revealed by metagenomic analysis

Toshiaki Kudo, Atsushi Kobiyama, Jonaira Rashid, Md Shaheed Reza, Yuichiro Yamada, Yuri Ikeda, Daisuke Ikeda, Nanami Mizusawa, Kazuho Ikeo, Shigeru Sato …

Gene 665 174-184 2018年7月30日
Metagenome-based diversity analyses suggest a strong locality signal for bacterial communities associated with oyster aquaculture farms in Ofunato Bay

Atsushi Kobiyama, Kazuho Ikeo, Md Shaheed Reza, Jonaira Rashid, Yuichiro Yamada, Yuri Ikeda, Daisuke Ikeda, Nanami Mizusawa, Shigeru Sato, Takehiko Ogata …

Gene 665 149-154 2018年7月30日
Metagenomic analysis using 16S ribosomal RNA genes of a bacterial community in an urban stream, the Tama River, Tokyo

Md Shaheed Reza, Nanami Mizusawa, Ayaka Kumano, Chiharu Oikawa, Daisuke Ouchi, Atsushi Kobiyama, Yuichiro Yamada, Yuri Ikeda, Daisuke Ikeda, Kazuho Ikeo …

Fisheries Science 84(3) 563-577 2018年5月1日
Rapid adaptation to near extinction in microbial experimental evolution

Michael Travisano, Michihisa Maeda, Fumie Fuji, Toshiaki Kudo

Journal of Bioeconomics 20(1) 141-152 2018年4月
In memoriam: Koki Horikoshi (1932-2016).

Toshiaki Kudo

Extremophiles : life under extreme conditions 20(4) 383-4 2016年7月
Identification of 9α-hydroxy-17-oxo-1,2,3,4,10,19-hexanorandrost-6- en-5-oic acid and β-oxidation products of the C-17 side chain in cholic acid degradation by Comamonas testosteroni TA441

Masae Horinouchi, Toshiaki Hayashi, Hiroyuki Koshino, Michal Malon, Hiroshi Hirota, Toshiaki Kudo

Journal of Steroid Biochemistry and Molecular Biology 143 306-322 2014年9月
Identification of 9α-hydroxy-17-oxo-1,2,3,4,10,19-hexanorandrostan- 5-oic acid in steroid degradation by Comamonas testosteroni TA441 and its conversion to the corresponding 6-en-5-oyl coenzyme A (CoA) involving open reading frame 28 (ORF28)- and ORF30-encoded acyl-CoA dehydrogenases

Masae Horinouchi, Toshiaki Hayashi, Hiroyuki Koshino, Michal Malon, Hiroshi Hirota, Toshiaki Kudo

Journal of Bacteriology 196(20) 3598-3608 2014年
Draft genome sequences of cyclodextrin-producing alkaliphilic Bacillus strains JCM 19045, JCM 19046, and JCM 19047

Toshiaki Kudo, Kazuaki Sakamoto, Masashi Akinaga, Ayumi Kawauchi, Tomomi Nakahara, Xiaochi Zhang, Akinori Yamada, Kenshiro Oshima, Wataru Suda, Hirokazu Kuwahara …

Genome Announcements 2(2) 2014年
Draft genome sequences of Psychrobacter strains JCM 18900, JCM 18901, JCM 18902, and JCM 18903, isolated preferentially from frozen aquatic organisms

Toshiaki Kudo, Akihiro Kidera, Muneaki Kida, Ayumi Kawauchi, Ryo Shimizu, Tomomi Nakahara, Xiaochi Zhang, Akinori Yamada, Masao Amano, Yuki Hamada …

Genome Announcements 2(2) 2014年
Draft genome sequences of Geomicrobium sp. strains JCM 19037, JCM 19038, JCM 19039, and JCM 19055, isolated from aquatic samples

Toshiaki Kudo, Tomomi Nakahara, Xiaochi Zhang, Shigeto Taniyama, Osamu Arakawa, Shinji Murase, Hideaki Nakata, Kenshiro Oshima, Wataru Suda, Keiko Kitamura …

Genome Announcements 2(3) 2014年
Draft genome sequences of Vibrio sp. strains isolated from tetrodotoxin-bearing scavenging gastropod

Toshiaki Kudo, Ayumi Kawauchi, Tomomi Nakahara, Xiaochi Zhang, Shigeto Taniyama, Tomohiro Takatani, Osamu Arakawa, Kenshiro Oshima, Wataru Suda, Keiko Kitamura …

Genome Announcements 2(3) 2014年
Physiological characterization of aerobic culturable bacteria in the intestine of the sea cucumber Apostichopus japonicus

Xiaochi Zhang, Tomomi Nakahara, Shinji Murase, Hideaki Nakata, Tetsushi Inoue, Toshiaki Kudo

Journal of General and Applied Microbiology 59(1) 1-10 2013年3月22日
Heterologous expression and characterization of a glycoside hydrolase family 45 endo-β-1,4-glucanase from a symbiotic protist of the lower termite, reticulitermes speratus

Masato Otagiri, Crisanto M. Lopez, Katsuhiko Kitamoto, Manabu Arioka, Toshiaki Kudo, Shigeharu Moriya

Applied Biochemistry and Biotechnology 169(6) 1910-1918 2013年3月

もっとみる

MISC

Involvement of putative response regulator genes of the rice blast fungus Magnaporthe oryzae in osmotic stress response, fungicide action, and pathogenicity

Takayuki Motoyama, Naoko Ochiai, Masumi Morita, Yuki Iida, Ron Usami, Toshiaki Kudo

Current Genetics 54(4) 185-195 2008年
Molecular biology and biotechnology for reduction of Fusarium mycotoxin contamination

Makoto Kimura, Naoko Takahashi-Ando, Takumi Nishiuchi, Shuichi Ohsato, Takeshi Tokai, Noriyuki Ochiai, Makoto Fujimura, Toshiaki Kudo, Hiroshi Hamamoto, Isamu Yamaguchi

Pesticide Biochemistry and Physiology 86(3) 117-123 2006年11月
Strategies for bioremediation of polychlorinated biphenyls

Yoshiyuki Ohtsubo, Toshiaki Kudo, Masataka Tsuda, Yuji Nagata

Applied Microbiology and Biotechnology 65(3) 250-258 2004年8月
Preface

Isao Endo, Isamu Yamaguchi, Toshiaki Kudo, Hiroyuki Osada, Takehiko Shibata

Progress in Biotechnology 22(C) 2002年
The Na⁺/H⁺ antiporter of alkaliphilic Bacillus sp.

Makio Kitada, Saori Kosono, Toshiaki Kudo

Extremophiles 4(5) 253-258 2000年
Molecular phylogenetic identification of the intestinal anaerobic microbial community in the hindgut of the termite, Reticulitermes speratus, without cultivation

Toshiaki Kudo, Moriya Ohkuma, Shigeharu Moriya, Satoko Noda, Kuniyo Ohtoko

Extremophiles 2(3) 155-161 1998年8月
Symbiotic system in termite gut

M. Ohkuma, S. Moriya, T. Kudo

Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 43(9) 1237-1245 1998年7月
Cloning, expression, and nucleotide sequence of the α-amylase gene from the haloalkaliphilic archaeon Natronococcus sp. strain Ah-36

T. Kobayashi, H. Kanai, R. Aono, K. Horikoshi, T. Kudo

Journal of Bacteriology 176(16) 5131-5134 1994年
Escherichia coli secretion vector using the kil gene.

T. Kudo

Bioprocess technology 19 291-299 1994年
Location of F<inf>1</inf>ATPase-like Genes on the Physical Map of the Bacillus subtilis 168 Chromosome

Katharine J. Sutherland, Tetsuo Kobayashi, Toshiaki Kudo, Koki Horikoshi

Bioscience, Biotechnology and Biochemistry 57(7) 1202-1203 1993年
Genes controlling extracellular secretion by Escherichia coli and pharmaceutical biotechnology

T. Kudo, K. Horikoshi

Nippon rinsho. Japanese journal of clinical medicine 42(9) 2153-2165 1984年9月
The environmental factors affecting sporulation of an alkalophilic bacillus species

Toshiaki Kudo, Koki Horikoshi

Agricultural and Biological Chemistry 43(12) 2613-2614 1979年12月
Genetic analysis of a cold-sensitive chromosome segregation mutant of escherichia coli kl2

Toshiaki Kudo, Kazuo Nagai, Gakuzo Tamura

Agricultural and Biological Chemistry 41(3) 607-608 1977年3月

共同研究・競争的資金等の研究課題

海藻類からの新規極限環境微生物の探索とその有用糖質分解能の開発

日本学術振興会科学研究費助成事業基盤研究(C) 2009年 - 2012年

工藤俊章
植物-微生物共生系の環境汚染物質浄化への利用

日本学術振興会科学研究費助成事業基盤研究(A) 1998年 - 2000年

山口勇, 本山高幸, 有江力, 工藤俊章, GOUTHU Satya