Papers

Peer-reviewed Lead author
Sep, 2014

A rapid and enhanced DNA detection method for crop cultivar discrimination

JOURNAL OF BIOTECHNOLOGY
  • Yuki Monden
  • ,
  • Kazuto Takasaki
  • ,
  • Satoshi Futo
  • ,
  • Kousuke Niwa
  • ,
  • Mitsuo Kawase
  • ,
  • Hiroto Akitake
  • ,
  • Makoto Tahara

Volume
185
Number
First page
57
Last page
62
Language
English
Publishing type
Research paper (scientific journal)
DOI
10.1016/j.jbiotec.2014.06.013
Publisher
ELSEVIER SCIENCE BV

In many crops species, the development of a rapid and precise cultivar discrimination system has been required for plant breeding and patent protection of plant cultivars and agricultural products. Here, we successfully evaluated strawberry cultivars via a novel method, namely, the single tag hybridization (STH) chromatographic printed array strip (PAS) using the PCR products of eight genomic regions. In a previous study, we showed that genotyping of eight genomic regions derived from FaRE1 retrotransposon insertion site enabled to discriminate 32 strawberry cultivars precisely, however, this method required agarose/acrylamide gel electrophoresis, thus has the difficulty for practical application. In contrast, novel DNA detection method in this study has some great advantages over standard DNA detection methods, including agarose/acrylamide gel electrophoresis, because it produces signals for DNA detection with dramatically higher sensitivity in a shorter time without any preparation or staining of a gel. Moreover, this method enables the visualization of multiplex signals simultaneously in a single reaction using several independent amplification products. We expect that this novel method will become a rapid and convenient cultivar screening assay for practical purposes, and will be widely applied to various situations, including laboratory research, and on-site inspection of plant cultivars and agricultural products. (C) 2014 The Authors. Published by Elsevier B.V.

Link information
DOI
https://doi.org/10.1016/j.jbiotec.2014.06.013
Web of Science
https://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=JSTA_CEL&SrcApp=J_Gate_JST&DestLinkType=FullRecord&KeyUT=WOS:000341046100009&DestApp=WOS_CPL
ID information
  • DOI : 10.1016/j.jbiotec.2014.06.013
  • ISSN : 0168-1656
  • eISSN : 1873-4863
  • Web of Science ID : WOS:000341046100009

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