Akie Kobayashi

Profile Information

Affiliation: Assistant Professor, Graduate School of Life SciencesDepartment of Environmental Life Sciences, Tohoku University

Degree: 生命科学(東北大学)

J-GLOBAL ID: 201201014843490489
researchmap Member ID: 7000003530

External link: http://db.tohoku.ac.jp/whois/e_detail/33b0ceabbe0e5f604c7f0a71b3f50528.html

Research Interests

Papers

MIZU-KUSSEI1 (MIZ1) and GNOM/MIZ2 control not only positive hydrotropism but also phototropism in Arabidopsis roots

Lei Pang, Akie Kobayashi, Yuka Atsumi, Yutaka Miyazawa, Nobuharu Fujii, Daniela Dietrich, Malcolm J Bennett, Hideyuki Takahashi

Journal of Experimental Botany, May 23, 2023
Local and global crosstalk among heterochromatin marks drives DNA methylome patterning in Arabidopsis.

Taiko Kim To, Chikae Yamasaki, Shoko Oda, Sayaka Tominaga, Akie Kobayashi, Yoshiaki Tarutani, Tetsuji Kakutani

Nature communications, 13(1) 861-861, Feb 14, 2022
Plasma membrane-associated Ca2+-binding protein PCaP1 is involved in root hydrotropism of Arabidopsis thaliana.

Tanaka-Takada N, Kobayashi A, Takahashi H, Kamiya T, Kinoshita T, Maeshima M

Plant and Cell Physiology, Mar, 2019 Peer-reviewed
Circumnutational movement in rice coleoptiles involves the gravitropic response: analysis of an agravitropic mutant and space-grown seedlings.

Kobayashi A, Kim H-J, Tomita Y, Miyazawa Y, Fujii N, Yano S, Yamazaki C, Kamada M, Kasahara H, Miyabayashi S …

Physiologia PLantarum, Aug, 2018 Peer-reviewed
Root-tip-mediated inhibition of hydrotropism is accompanied with the suppression of asymmetric expression of auxin-inducible genes in response to moisture gradients in cucumber roots

Nobuharu Fujii, Sachiko Miyabayashi, Tomoki Sugita, Akie Kobayashi, Chiaki Yamazaki, Yutaka Miyazawa, Motoshi Kamada, Haruo Kasahara, Ikuko Osada, Toru Shimazu …

PLoS ONE, 13(1), Jan 1, 2018 Peer-reviewed
Gravitropism interferes with hydrotropism via counteracting auxin dynamics in cucumber roots: clinorotation and spaceflight experiments

Keita Morohashi, Miki Okamoto, Chiaki Yamazaki, Nobuharu Fujii, Yutaka Miyazawa, Motoshi Kamada, Haruo Kasahara, Ikuko Osada, Toru Shimazu, Yasuo Fusejima …

NEW PHYTOLOGIST, 215(4) 1476-1489, Sep, 2017 Peer-reviewed
Root hydrotropism is controlled via a cortex-specific growth mechanism

Daniela Dietrich, Lei Pang, Akie Kobayashi, John A. Fozard, Veronique Boudolf, Rahul Bhosale, Regina Antoni, Tuan Nguyen, Sotaro Hiratsuka, Nobuharu Fujii …

NATURE PLANTS, 3(6), Jun, 2017 Peer-reviewed
Auxin transport and response requirements for root hydrotropism differ between plant species

Yusuke Nakajima, Yoshitaka Nara, Akie Kobayashi, Tomoki Sugita, Yutaka Miyazawa, Nobuharu Fujii, Hideyuki Takahashi

JOURNAL OF EXPERIMENTAL BOTANY, 68(13) 3441-3456, Jun, 2017 Peer-reviewed
Root hydrotropism is controlled via a cortex-specific growth mechanism

Daniela DIetrich, Lei Pang, Akie Kobayashi, John A. Fozard, Véronique Boudolf, Rahul Bhosale, Regina Antoni, Tuan Nguyen, Sotaro Hiratsuka, Nobuharu Fujii …

Nature Plants, 3, May 8, 2017 Peer-reviewed
Gravitropic response and circumnutation in pea (Pisum sativum) seedling roots

Hye-jeong Kim, Akie Kobayashi, Nobuharu Fujii, Yutaka Miyazawa, Hideyuki Takahashi

PHYSIOLOGIA PLANTARUM, 157(1) 108-118, May, 2016 Peer-reviewed
MOLECULAR MECHANISMS OF HYDROTROPISM IN SEEDLING ROOTS OF ARABIDOPSIS THALIANA (BRASSICACEAE)

Teppei Moriwaki, Yutaka Miyazawa, Akie Kobayashi, Hideyuki Takahashi

AMERICAN JOURNAL OF BOTANY, 100(1) 25-34, Jan, 2013 Peer-reviewed
Overexpression of MIZU-KUSSEI1 Enhances the Root Hydrotropic Response by Retaining Cell Viability Under Hydrostimulated Conditions in Arabidopsis thaliana

Yutaka Miyazawa, Teppei Moriwaki, Mayumi Uchida, Akie Kobayashi, Nobuharu Fujii, Hideyuki Takahashi

PLANT AND CELL PHYSIOLOGY, 53(11) 1926-1933, Nov, 2012 Peer-reviewed
RNAi-independent de novo DNA methylation revealed in Arabidopsis mutants of chromatin remodeling gene DDM1

Taku Sasaki, Akie Kobayashi, Hidetoshi Saze, Tetsuji Kakutani

PLANT JOURNAL, 70(5) 750-758, Jun, 2012 Peer-reviewed
The effects of heat induction and the siRNA biogenesis pathway on the transgenerational transposition of ONSEN, a copia-like retrotransposon in Arabidopsis thaliana

Wataru Matsunaga, Akie Kobayashi, Atsushi Kato, Hidetaka Ito

PLANT AND CELL PHYSIOLOGY, 53(5) 824-833, May, 2012 Peer-reviewed
Centromere-targeted de novo integrations of an LTR retrotransposon of Arabidopsis lyrata

Sayuri Tsukahara, Akira Kawabe, Akie Kobayashi, Tasuku Ito, Tomoyuki Aizu, Tadasu Shin-i, Atsushi Toyoda, Asao Fujiyama, Yoshiaki Tarutani, Tetsuji Kakutani

GENES & DEVELOPMENT, 26(7) 705-713, Apr, 2012 Peer-reviewed
MIZ1, an essential protein for root hydrotropism, is associated with the cytoplasmic face of the endoplasmic reticulum membrane in Arabidopsis root cells

Tomokazu Yamazaki, Yutaka Miyazawa, Akie Kobayashi, Teppei Moriwaki, Nobuharu Fujii, Hideyuki Takahashi

FEBS LETTERS, 586(4) 398-402, Feb, 2012 Peer-reviewed
Hormonal Regulation of Lateral Root Development in Arabidopsis Modulated by MIZ1 and Requirement of GNOM Activity for MIZ1 Function

Teppei Moriwaki, Yutaka Miyazawa, Akie Kobayashi, Mayumi Uchida, Chiaki Watanabe, Nobuharu Fujii, Hideyuki Takahashi

PLANT PHYSIOLOGY, 157(3) 1209-1220, Nov, 2011 Peer-reviewed
A molecular mechanism unique to hydrotropism in roots

Yutaka Miyazawa, Yoshie Ito, Teppei Moriwaki, Akie Kobayashi, Nobuharu Fujii, Hideyuki Takahashi

PLANT SCIENCE, 177(4) 297-301, Oct, 2009 Peer-reviewed
Bursts of retrotransposition reproduced in Arabidopsis

Sayuri Tsukahara, Akie Kobayashi, Akira Kawabe, Olivier Mathieu, Asuka Miura, Tetsuji Kakutani

NATURE, 461(7262) 423-U125, Sep, 2009 Peer-reviewed
An Arabidopsis jmjC domain protein protects transcribed genes from DNA methylation at CHG sites

Asuka Miura, Miyuki Nakamura, Soichi Inagaki, Akie Kobayashi, Hidetoshi Saze, Tetsuji Kakutani

EMBO JOURNAL, 28(8) 1078-1086, Apr, 2009 Peer-reviewed

Misc.

重力屈性が関与するイネ幼葉鞘の回旋転頭運動:lazy 1突然変異体と宇宙実験による解析

小林啓恵, 冨田優太, 金慧正, 藤井伸治, 宮沢豊, 矢野幸子, 山崎千秋, 鎌田源司, 笠原春夫, 嶋津徹 …

日本植物学会大会研究発表記録, 80th 202, Sep 1, 2016
イネ幼葉鞘の回旋転頭運動における重力応答とその宇宙実験による検証

小林啓恵, 冨田優太, 金慧正, 藤井伸治, 宮沢豊, 矢野幸子, 山崎千秋, 鎌田源司, 笠原春夫, 嶋津徹 …

日本宇宙航空環境医学会大会プログラム・予稿集, 62nd 103, 2016
9. L-Glutamate plays an important role in early hydrotropic response in Arabidopsis thaliana

Iwata Satoru, Fujii Nobuharu, Kobayashi Akie, Takahashi Hideyuki

48 24-24, Oct 4, 2013
8. Root hydrotropism as affected by inhibitors of auxin transport, action and biosynthesis in rice seedlings

Nakajima Yusuke, Fujii Nobuharu, Miyazawa Yutaka, Kobayashi Akie, Tkahashi hideyuki

48 23-23, Oct 4, 2013
微小重力下で亢進されるキュウリ根の水分屈性

高橋秀幸, 諸橋恵太, 岡本美貴, 山崎千秋, 藤井伸治, 宮沢豊, 東端晃, 嶋津徹, 鎌田源司, 笠原春夫 …

日本植物学会大会研究発表記録, 77th 182, Aug 20, 2013
Mobile Mutator-like Transposon Without Terminal Inverted Repeat

Yu Fu, Akie Kobayashi, Yoshiaki Tarutani, Tetsuji Kakutani

GENES & GENETIC SYSTEMS, 87(6) 431-431, Dec, 2012
Centromere-specific distribution of COPIA93 retrotransposons in Arabidopsis lyrata

Sayuri Tsukahara, Akira Kawabe, Akie Kobayashi, Tasuku Ito, Tomoyuki Aizu, Tadasu Shin-I, Atsushi Toyoda, Asao Fujiyama, Yoshiaki Tarutani, Tetsuji Kakutani

GENES & GENETIC SYSTEMS, 86(6) 391-391, Dec, 2011
Transposition and control of a Mutator-like element without terminal inverted repeat.

Fu Yu, Akie Kobayashi, Tetsuji Kakutani

GENES & GENETIC SYSTEMS, 86(6) 421-421, Dec, 2011
Centromere specific distribution of COPIA93 in Arabidopsis lyrata

Sayuri Tsukahara, Akie Kobayashi, Akira Kawabe, Tetsuji Kakutani

GENES & GENETIC SYSTEMS, 85(6) 433-433, Dec, 2010
53. MIZ1 integrates light and ABA signal so as to regulate hydrotropic response adequately

Moriwaki Teppei, Kobayashi Akie, Miyazawa Yutaka, Fujii Nobuharu, Takahashi Hideyuki

(45) 70-70, Oct 1, 2010
Bursts of retrotransposition reproduced in Arabidopsis

Akie Kobayashi, Akira Kawabe, Sayuri Tsukahara, Asuka Miura, Tetsuji Kakutani

GENES & GENETIC SYSTEMS, 84(6) 438-438, Dec, 2009
Mobile endogenous retrotransposons in Arabidopsis thaliana

Sayuri Tsukahara, Akie Kobayashi, Akira Kawabe, Asuka Miura, Tetsuji Kakutani

GENES & GENETIC SYSTEMS, 84(6) 438-438, Dec, 2009
Distinctive auxin regulation in root hydrotropism of Arabidopsis thaliana

Tomoko Kaneyasu, Akie Kobayashi, Mayumi Nakayama, Nobuharu Fujii, Hideyuki Takahashi, Yutaka Miyazawa

PLANT AND CELL PHYSIOLOGY, 48 S200-S200, 2007
A novel gene responsible for hydrotropism in Arabidopsis roots

Akie Kobayashi, Akiko Takahashi, Yoko Kakimoto, Yutaka Miyazawa, Nobuharu Fujii, Atsushi Higashitani, Hideyuki Takahashi

PLANT AND CELL PHYSIOLOGY, 48 S144-S144, 2007
Characterization of Arabidopsis root hydrotropic mutant, miz4

OOBA Atsushi, MIYAZAWA Yutaka, KOBAYASHI Akie, TAKAHASHI Akiko, FUJII Nobuharu, TAKAHASHI Hideyuki

119 86-87, Dec 1, 2006
Identification of a novel gene for hydrotropism in Arabidopsis

KOBAYASHI Akie, TAKAHASHI Akiko, KAKIMOTO Yoko, MIYAZAWA Yutaka, FUJII Nobuharu, TAKAHASHI Hideyuki

119 68-68, Dec 1, 2006
Analyses of genes whose transcript levels are regulated during root hydrotropic response in Arabidopsis

MIYAZAWA Yutaka, OOBA Atsushi, KOBAYASHI Akie, NAKAYAMA Mayumi, FUJII Nobuharu, TAKAHASHI Hideyuki

119 87-87, Dec 1, 2006
5. Identification of molecules that dissect intimate relationship between gravitropism and hydrotropism

Kaneyasu Tomoko, Kobayashi Akie, Takahashi Akiko, Miyazawa Yutaka, Fujii Nobuharu, Takahashi Hideyuki

(40) 24-24, Oct 13, 2005
Novel hydrotropic mutants of Arabidopsis roots: Hydrotropism, gravitropism, phototropism and waving response of rhy4 and rhy5

A Takahashi, A Kobayashi, Y Kakimoto, N Fujii, H Takahashi

PLANT AND CELL PHYSIOLOGY, 45 S183-S183, 2004
シロイヌナズナの水分屈性突然変異体(rhy4, rhy5)の特性解析

高橋あき子, 小林啓恵, 柿本洋子, 藤井伸治, 高橋秀幸

根の研究 = Root research, 12(4) 517-517, Dec 19, 2003

Research Projects

Identification and analysis of molecules that function in root hydrotropism for innovation of plant production under drought condition

Grants-in-Aid for Scientific Research, Grant-in-Aid for Young Scientists (B), Japan Society for the Promotion of Science, Apr, 2014 - Mar, 2017

Kobayashi Akie
Mechanism of root hydrotropism for water acquisition in land plants

Grants-in-Aid for Scientific Research, Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area), Japan Society for the Promotion of Science, Apr, 2010 - Mar, 2015

TAKAHASHI Hideyuki, MIYAZAWA Yutaka, FUJII Nobuharu, MIYAZAWA Yutaka, YAMAZAKI Tomokazu, KOBAYASHI Akie, MORITA Miyo
根の水分屈性発現機構の解明とそれを利用した植物の生長制御法に関する基礎的研究

科学研究費助成事業, 特別研究員奨励費, 日本学術振興会, 2003 - 2005

小林啓恵

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