Tatsuya Akutsu

J-GLOBAL         Last updated: Nov 12, 2019 at 12:59
Tatsuya Akutsu
Kyoto University
Institute for Chemical Research

Published Papers

Akutsu T, Melkman AA
IEEE transactions on neural networks and learning systems   30(8) 2383-2396   Aug 2019   [Refereed]
Marini S, Vitali F, Rampazzi S, Demartini A, Akutsu T
Bioinformatics (Oxford, England)   35(6) 923-929   Mar 2019   [Refereed]
Wang J, Li J, Yang B, Xie R, Marquez-Lago TT, Leier A, Hayashida M, Akutsu T, Zhang Y, Chou KC, Selkrig J, Zhou T, Song J, Lithgow T
Bioinformatics (Oxford, England)   35(12) 2017-2028   Jun 2019   [Refereed]
Matsubara T, Ochiai T, Hayashida M, Akutsu T, Nacher JC
Journal of bioinformatics and computational biology   17(3) 1940007   Jun 2019   [Refereed]
Lin CY, Ruan P, Li R, Yang JM, See S, Song J, Akutsu T
Journal of bioinformatics and computational biology   17(3) 1940005   Jun 2019   [Refereed]
Nishiyama Y, Shurbevski A, Nagamochi H, Akutsu T
IEEE/ACM transactions on computational biology and bioinformatics   16(1) 77-90   Jan 2019   [Refereed]
Schwartz JM, Otokuni H, Akutsu T, Nacher JC
Nature communications   10(1) 2725   Jun 2019   [Refereed]
Hou W, Ruan P, Ching WK, Akutsu T
Journal of theoretical biology   463 1-11   Feb 2019   [Refereed]
Ravindran V, Nacher JC, Akutsu T, Ishitsuka M, Osadcenco A, Sunitha V, Bagler G, Schwartz JM, Robertson DL
Scientific reports   9(1) 2066   Feb 2019   [Refereed]
Array,Morihiro Hayashida,Tatsuya Akutsu
J. Comput. Syst. Sci.   106 94-128   2019   [Refereed]
Array,Bingjiao Yang,Yi An,Tatiana T. Marquez-Lago,Array,Jonathan Wilksch,Qingyang Hong,Yang Zhang 0010,Morihiro Hayashida,Tatsuya Akutsu,Array,Richard A. Strugnell,Jiangning Song,Array
Briefings in Bioinformatics   20(3) 931-951   2019   [Refereed]
Array,Yanan Wang,Array,Tatsuya Akutsu,Neil D. Rawlings,Geoffrey I. Webb,Kuo-Chen Chou
Briefings in Bioinformatics   20(2) 638-658   2019   [Refereed]
Nacher JC, Ishitsuka M, Miyazaki S, Akutsu T
Scientific reports   9(1) 576   Jan 2019   [Refereed]
Nacher JC, Akutsu T
Methods in molecular biology (Clifton, N.J.)   1912 289-300   2019   [Refereed]
Li F, Li C, Marquez-Lago TT, Leier A, Akutsu T, Purcell AW, Ian Smith A, Lithgow T, Daly RJ, Song J, Chou KC
Bioinformatics (Oxford, England)   34(24) 4223-4231   Dec 2018   [Refereed]
Tamura T, Lu W, Song J, Akutsu T
IEEE/ACM transactions on computational biology and bioinformatics   15(6) 1853-1862   Nov 2018   [Refereed]


Melkman Avraham, Cheng Xiaoqing, Ching Wai-Ki, Akutsu Tatsuya
情報処理学会バイオ情報学研究会      Jun 2017
海洋化学研究   29(2) 85‐91   Nov 2016
Y. Qiu, X. Cheng, W-K. Ching, H. Jiang, T. Akutsu
Proc. 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2015)   263-266   Dec 2015   [Refereed]
小谷野仁, 林田守広, 阿久津達也
日本応用数理学会年会講演予稿集(CD-ROM)   2015 ROMBUNNO.9GATSU9NICHI,13:30,F,1   Sep 2015
小谷野仁, 林田守広, 阿久津達也
電子情報通信学会技術研究報告   115(112(IBISML2015 1-26)) 131-136   Jun 2015
劉立偉, 森智弥, 趙楊, 林田守広, 阿久津達也
電子情報通信学会技術研究報告   115(112(IBISML2015 1-26)) 245-246   Jun 2015

Books etc

Algorithms for Analysis, Inference, and Control of Boolean Networks
Tatsuya Akutsu
World Scientific   Apr 2018   
Sequence alignment algorithms: Applications to glycans and trees and tree-like structures
Akutsu T
Handbook of Chemoinformatics Algorithms , , 363-381   2010   

Conference Activities & Talks

Boolean Network-Based Approaches towards Precisions Medicine [Invited]
Tatsuya Akutsu
Workshop on Precision Network Medicine in the era of big data! (ICSB 2019)   31 Oct 2019   
Boolean Network-based Approaches for Controlling Genetic Networks and Metabolic Networks [Invited]
Tatsuya Akutsu
International Symposium on the Genetics of Industrial Microorganisms (GIM 2019)   9 Sep 2019   
Graph theoretic approaches to controllability of biological networks [Invited]
Tatsuya Akutsu
Workshop on Bioinformatics and Data Analysis   15 Jun 2019   
A Method for Analyzing Single Cell Expression Data Based on PCA, Gaussian Mixture Model, and Kullback–Leibler Divergence [Invited]
Tatsuya Akutsu
Japan-Germany International Workshop 2019-1 The Human Cell Type Authentication Initiative   15 May 2019   
A mixed integer linear programming formulation to artificial neural networks
Tatsuya Akutsu, Hiroshi Nagamochi
2nd International Conference on Information Science and System   17 Mar 2019   
Integration and Analysis of Heterogeneous Biological Data via Convolutional Neural Networks and Matrix Factorization [Invited]
Tatsuya Akutsu
9th International Conference on Bioscience, Biochemistry and Bioinformatics   8 Jan 2019   
Algorithms for Analysis and Control of Boolean Networks [Invited]
5th International Conference on Algorithms for Computational Biology   25 Jun 2018   
Minimum Dominating Set-based Approaches for Analyzing and Controlling Biological Networks
Tatsuya Akutsu
2016 Biotech and Pharmaceutical Service Platform - Biological Network Analysis Conference   4 Nov 2016   
Minimum Dominating Set-Based Approaches for Controlling and Analyzing Biological Networks
Tatsuya Akutsu
The 2016 (26th) Annual Meeting of the Japanese Society for Mathematical Biology   7 Sep 2016   
Minimum Dominating Set-Based Approaches for Controlling and Analyzing Biological Networks
Tatsuya Akutsu
Controlling Complex Network Systems in Biology (Workshop)   5 Sep 2016   
Extensions and Applications of the Minimum Dominating Set-Based Approach to Controllability of Complex Networks
Tatsuya Akutsu
Controlling Complex Networks (Satellite Symposium of International School and Conference on Network Science)   30 May 2016