Tomoko Doi

J-GLOBAL         Last updated: Oct 4, 2019 at 11:08
 
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Name
Tomoko Doi
Affiliation
Kyoto University
Section
Department of Biophysics
Job title
Associate Professor
Degree
Ph.D(Osaka University)

Published Papers

 
W. Shihoya, T. Nishizawa, K. Yamashita, A. Inoue, K. Hirata, F.M.N. Kadji, A. Okuta, K. Tani, J. Aoki, Y. Fujiyoshi, T. Doi*, O.Nureki
Nature Structural & Molecular Biology   24(9) 758-764   Sep 2017   [Refereed]
Wataru Shihoya, Tomohiro Nishizawa, Akiko Okuta, Kazutoshi Tani, Naoshi Dohmae, Yoshinori Fujiyoshi, Osamu Nureki, Tomoko Doi*
Nature   537(7620) 368   Sep 2016   [Refereed]
A. Okuta, K. Tani, S. Nishimura, Y. Fujiyoshi & T. Doi*.
Journal of Molecular Biology   428(11) 2265-2274   Jun 2016   [Refereed]
Hitoshi Nagura, Tomoko Doi and Yoshinori Fujiyoshi
European Journal of Neuroscience   43 618-625   2016   [Refereed]
K. Minatohara, Y. Murata, Y. Fujiyoshi and T. Doi*
Journal of Neurochemistry   134(4) 618-628   Jul 2015   [Refereed]
K. Minatohara; S.-H. Ichikawa; T. Seki; Y. Fujiyoshi; T. Doi
Neuroscience Letters   533(1) 44-49   Jan 2013   [Refereed]
H. Nagura; Y. Ishikawa; K. Kobayashi; K. Takao; T. Tanaka; K. Nishikawa; H. Tamura; S. Shiosaka; H. Suzuki; T. Miyakawa; Y. Fujiyoshi; T. Doi*
Molecular Brain   5(1)    Dec 2012   [Refereed]
M. Nonaka; T. Doi*; Y. Fujiyoshi; S. Takemoto-Kimura; H. Bito
Journal of Neuroscience   26(3) 763-774   2006   [Refereed]
Y. Murata; T. Doi; H. Taniguchi; Y. Fujiyoshi
Biochemical and Biophysical Research Communications   327(1) 183-191   Feb 2005   [Refereed]
T. Kodama; H. Imai; T. Doi*; O. Chisaka; Y. Shichida; Y. Fujiyoshi
Experimental Eye Research   80(6) 859-869   2005   [Refereed]
T. Yamaguchi; I. Arimoto-Tahara; Y. Fujiyoshi; T. Doi*
Biotechnology Letters   26(4) 293-299   Feb 2004   [Refereed]
T. Yamaguchi; Y. Murata; Y. Fujiyoshi; T. Doi*
European Journal of Biochemistry   270(8) 1816-1827   Apr 2003   [Refereed]
A. Oshima; T. Doi; K. Mitsuoka; S. Maeda; Y. Fujiyoshi
Journal of Biological Chemistry   278(3) 1807-1816   2003   [Refereed]
Y. Hiroaki; K. Nishikawa; K. Mitsuoka; T. Tachibana; K. Sobue; T. Doi; Y. Fujiyoshi
Biochemical and Biophysical Research Communications   295(3) 756-765   Jul 2002   [Refereed]
K. Irie; T. Nakatsu; K. Mitsuoka; A. Miyazawa; K. Sobue; Y. Hiroaki; T. Doi; Y. Fujiyoshi; H. Kato
Journal of Molecular Biology   318(4) 1117-1126   May 2002   [Refereed]
F. Imamura; S. Maeda; T. Doi*; Y. Fujiyoshi
Journal of Biological Chemistry   277(5) 3640-3646   Feb 2002   [Refereed]
F. Imamura; I. Arimoto; Y. Fujiyoshi; T. Doi*
Biochemistry   39(4) 686-692   2000   [Refereed]
T. Doi*; H. Sugimoto; I. Arimoto; Y. Hiroaki; Y. Fujiyoshi
Biochemistry   38(10) 3090-3099   Mar 1999   [Refereed]
T. Matsuda; Y. Hashimoto; H. Ueda; T. Asano; Y. Matsuura; T. Doi; T. Takao; Y. Shimonishi; Y. Fukada
Biochemistry   37(27) 9843-9850   1998   [Refereed]
T. Doi*; Y. Hiroaki; I. Arimoto; Y. Fujiyoshi; T. Okamoto; M. Satoh; Y. Furuichi
European Journal of Biochemistry   248(1) 139-148   1997   [Refereed]
B. J. Lee, T. Sakashita, T. Ohkubo, M. Ikehara, T. Doi, K. Morikawa, Y. Kyogoku, T. Osafune, S. Iwai, and E. Ohtsuka
Biochemistry   33 57-64   1994   [Refereed]
K. Morikawa, O. Matsumoto, M. Tsujimoto, K. Katayanagi, M. Ariyoshi, T. Doi, M. Ikehara, T. Inaoka, and E. Ohtsuka
Science   256 523-526   1992   [Refereed]
N. Hori, T. Doi, Y. Karaki, M. Kikuchi, M. Ikehara, and E. Ohtsuka
Nucleic Acids Res.   20 4761-4764   1992   [Refereed]
*T. Doi, A. Recktenwald, Y. Karaki, M. Kikuchi, K. Morikawa, M. Ikehara, T. Inaoka, N. Hori, and E. Ohtsuka.
Proc. Natl. Acad. Sci. U. S. A.   89 9420-9424   1992   [Refereed]
T. Doi, R. S. Molday, and H. G. Khorana.
Proc. Natl. Acad. Sci. U. S. A.   87 4991-4995   1990   [Refereed]
S. S. Karnik, T. Doi, R. S. Molday, and H. G. Khorana.
Proc. Natl. Acad. Sci. U. S. A.   87 8955-8959   1990   [Refereed]
Studies on bacteriorhodopsin. II.
H. G. Khorana, M. S. Braimann, B. H. Chao, T. Doi, S. L. Flitsch, M. A. Gilles-Gonzales, N. R. Hackett, S. Jones, S. S. Karnik, K. -M. Lo, T. Marti, T. Mogi, L. J. Stern, and S. Subramanian
Structure and expression   1 1-23   1988   [Refereed]
Studies on light transduction by bacteriorhodopsin and rhodopsin
M. Braiman, J. Bubis, B. H. Chao, T. Doi, H. -B. Chen, S. L. Flitsch, R. R. Franke, M. A. Gilles-Gonzales, R. M. Graham, S. S. Karnik, H. G. Khorana, B. E. Knox, M. P. Krebs, T. Marti, T. Mogi, T. Nakayama, D. D. Oprian, K. L. Puckett, T. P. Sakmar, L. J. Stern, S. Subramanian, and D. A. Thompson
Cold Spring Harbor Symposia on Quantitative Biology LIII   LIII 355-364   1988   [Refereed]
Site specific mutagenesis in structure-function studies of bacteriorhodopsin
H. G. Khorana, M. S. Braimann, B. H. Chao, T. Doi, S. L. Flitsch, M. A. Gilles-Gonzales, N. R. Hackett, S. S. Karnik, T. Mogi, M. M. Nassal, and L. J. Stern
Chemica Scripta   27B 137-147   1987   [Refereed]
Efficient cleavage by alpha-thrombin of a recombinant fused protein which contains insulin-like growth factor I
S. Nishikawa, K. Yanase, T. Tokunaga-Doi, K. Kodama, H. Gomi, S. Uesugi, E. Ohtsuka, Y. Kato, F. Suzuki, and M. Ikehara
Protein Engineering   1 487-492   1987   [Refereed]
Structure-function studies on bacteriorhodopsin II. Improved expression of the bacterio-opsin gene in Escherichia coli
S. S. Karnik, M. Nassal, T. Doi, E. Jay, V. Sgaramella, and H. G. Khorana
J. Biol.Chem.   262 9255-9263   1987   [Refereed]
S. Iwai, A. Imura, Y. Inoue, H. Inoue, K. Miura, T. Tokunaga-Doi, M. Ikehara, and E. Ohtsuka
Chem. Pharm. Bull.   34 2202-2208   1986   [Refereed]
Expression of the amino terminal part of synthetic human growth hormone gene and somatomedine-like activity of expressed protein
T. Doi, T. Tokunaga-Doi, E. Ohtsuka, Y. Hiraki, F. Suzuki, and M. Ikehara
Protein Engineering   1 17-21   1986   [Refereed]
T. Tokunaga-Doi, S. Iwai, H. Gomi, K. Kodama, E. Ohtsuka, M. Ikehara, O. Chisaka, and K. Matsubara
Gene   39 117-120   1985   [Refereed]
T. Tokunaga-Doi, T. Tanaka, M. Ikehara, and E. Ohtsuka
Eur. J. Biochem.   153 445-449   1985   [Refereed]
E. Ohtsuka, S. Iwai, T. Tokunaga-Doi, and M. Ikehara
Chem. Pharm. Bull.   33 3153-3159   1985   [Refereed]
Synthesis of a gene for human growth hormone and its expression in Escherichia coli
M. Ikehara, E. Ohtsuka, T. Tokunaga-Doi, Y. Taniyama, S. Iwai, K. Kitano, S. Miyamoto, T. Ohgi, Y. Sakuragawa, K. Fujiyama, T. Ikari, M. Kobayashi, T. Miyake, S. Shibahara, A. Ono, T. Ueda, T. Tanaka, H. Baba, T. Miki, A. Sakurai, T. Oishi, T. Chisaka, and K. Matsubara
Proc. Natl. Acad. Sci. U. S. A.   81 5956-5960   1984   [Refereed]
Total synthesis of a RNA molecule with sequence identical to that of Escherichia coli formylmethionine tRNA
E. Ohtsuka, S. Tanaka, T. Tanaka, T. Miyake, A. F. Markham, E. Nakagawa, T. Wakabayashi, Y. Taniyama, S. Nishikawa, R. Fukumoto, H. Uemura, T. Doi, T. Tokunaga-Doi, and M. Ikehara
Proc. Natl. Acad. Sci. U. S. A.   78 5493-5497   1981   [Refereed]

Misc

 
Human Mutations in Endothelin A Receptor provide an insight into structural rearrangement in GPCR
Y. Kurihara, T. Doi, C.T. Gordon, J. Amiel, H. Kurihara
Molecular pharmacology Gordon Research Conference      Mar 2017
Crystal structures of the endothelin type B receptor
Wataru Shihoya, Tomohiro Nishizawa, Akiko Okuta, Kazutoshi Tani, Yoshinori Fujiyoshi, Osamu Nureki,Tomoko Doi
   Oct 2015
Characterization of hETBR expressed in E.coli for isolation of thermo-stable mutants.
奥田明子、西村章子、藤吉好則、土井知子
日本生化学会      Oct 2009   [Refereed]
The ligand-binding of PDZ domains play different roles in the synaptic clustering of PSD-95 and SAP102.
市川昌平、関達也、藤吉好則、土井知子
分子生物学会      Dec 2009   [Refereed]
Characterization of thermostable hETBR mutants
OKUTA Akiko;NISHIMURA Shoko;FUJIYOSHI Yoshinori;FUJIYOSHI Yoshinori;DOI Tomoko
生化学   ROMBUNNO.4P-0294   2010   [Refereed]

Books etc

 
Structure and activation of endothelin ETB receptor by endothelin [Video file].
Tomoko Doi
Henry Stewart Talks,   Sep 2019   
Early activation mechanism of ETB receptor by ET-1 binding
Tomoko Doi, Kazutoshi Tani (Part:Joint Work)
Aug 2017   

Conference Activities & Talks

 
Endothelin Receptor-Ligand binding and conformational changes
Tomoko Doi
International GPCR symposium   30 Jun 2018   
Structure and function of endothelin receptor [Invited]
Tomoko Doi
The 2nd Japanese Pulmonary Circulation and Pulmonary Hypertension Society   2 Jun 2017