Toru Nakatsu

J-GLOBAL         Last updated: Oct 1, 2019 at 10:05
 
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Name
Toru Nakatsu
Affiliation
Kyoto University

Published Papers

 
Kodan A, Yamaguchi T, Nakatsu T, Matsuoka K, Kimura Y, Ueda K, Kato H
Nature communications   10(1) 88   Jan 2019   [Refereed]
Yamashita Keitaro, Kuwabara Naoyuki, Nakane Takanori, Murai Tomohiro, Mizohata Eiichi, Sugahara Michihiro, Pan Dongqing, Masuda Tetsuya, Suzuki Mamoru, Sato Tomomi, Kodan Atsushi, Yamaguchi Tomohiro, Nango Eriko, Tanaka Tomoyuki, Tono Kensuke, Joti Yasumasa, Kameshima Takashi, Hatsui Takaki, Yabashi Makina, Manya Hiroshi, Endo Tamao, Kato Ryuichi, Senda Toshiya, Kato Hiroaki, Iwata So, Ago Hideo, Yamamoto Masaki, Yumoto Fumiaki, Nakatsu Toru
IUCRJ   4 639-647   Sep 2017   [Refereed]
Sugahara M, Nakane T, Masuda T, Suzuki M, Inoue S, Song C, Tanaka R, Nakatsu T, Mizohata E, Yumoto F, Tono K, Joti Y, Kameshima T, Hatsui T, Yabashi M, Nureki O, Numata K, Nango E, Iwata S
Scientific reports   7(1) 703   Apr 2017   [Refereed]
Hasegawa K, Yamashita K, Murai T, Nuemket N, Hirata K, Ueno G, Ago H, Nakatsu T, Kumasaka T, Yamamoto M
Journal of synchrotron radiation   24(Pt 1) 29-41   Jan 2017   [Refereed]
Fukuda Y, Tse KM, Nakane T, Nakatsu T, Suzuki M, Sugahara M, Inoue S, Masuda T, Yumoto F, Matsugaki N, Nango E, Tono K, Joti Y, Kameshima T, Song C, Hatsui T, Yabashi M, Nureki O, Murphy ME, Inoue T, Iwata S, Mizohata E
Proceedings of the National Academy of Sciences of the United States of America      Feb 2016   [Refereed]
Nakane T, Song C, Suzuki M, Nango E, Kobayashi J, Masuda T, Inoue S, Mizohata E, Nakatsu T, Tanaka T, Tanaka R, Shimamura T, Tono K, Joti Y, Kameshima T, Hatsui T, Yabashi M, Nureki O, Iwata S, Sugahara M
Acta crystallographica. Section D, Biological crystallography   71(Pt 12) 2519-2525   Dec 2015   [Refereed]
Yamashita K, Pan D, Okuda T, Sugahara M, Kodan A, Yamaguchi T, Murai T, Gomi K, Kajiyama N, Mizohata E, Suzuki M, Nango E, Tono K, Joti Y, Kameshima T, Park J, Song C, Hatsui T, Yabashi M, Iwata S, Kato H, Ago H, Yamamoto M, Nakatsu T
Scientific reports   5 14017   Sep 2015   [Refereed]
Bunta Watanabe, Atsushi Ichiyanagi, Kozo Hirokawa, Keiko Gomi, Toru Nakatsu, Hiroaki Kato, Naoki Kajiyama
Bioorganic and Medicinal Chemistry Letters   25 3910-3913   May 2015
© 2015 Elsevier Ltd. Abstract Fructosyl peptide oxidases (FPOXs) play a crucial role in the diagnosis of diabetes. Their main function is to cleave fructosyl amino acids or fructosyl peptides into glucosone and the corresponding amino acids/dipept...
How can quantitative bioluminescence and in-situ fluorescence of firefly oxyluciferin in luciferase be compared with theoretical calculations?
Akiyama Hidefumi, Wang Yu, Hiyama Miyabi, Mochizuki Toshimitsu, Terakado Kanako, Nakatsu Toru
LUMINESCENCE   29 7-8   Aug 2014   [Refereed]
Saino H, Shimizu T, Hiratake J, Nakatsu T, Kato H, Sakata K, Mizutani M
The Journal of biological chemistry   289(24) 16826-16834   Jun 2014   [Refereed]
A. Kodan; T. Yamaguchi; T. Nakatsu; K. Sakiyama; C.J. Hipolito; A. Fujioka; R. Hirokane; K. Ikeguchi; B. Watanabe; J. Hiratake; Y. Kimura; H. Suga; K. Ueda; H. Kato
Proceedings of the National Academy of Sciences of the United States of America   111(11) 4049-4054   2014   [Refereed]
Hideki Kawai, Kai Hasegawa, Toru Nakatsu, Yasuhisa Naitoh, Yuki Takagi, Yoshifumi Wada, Taishi Takenobu, Kazuhiro Yanagi
Applied Physics Express   6    Jun 2013
We prepared string like assemblies of aligned single-wall carbon nanotubes (SWCNTs) in a (6, 5) nearly single-chiral state. We observed that by simply adjusting the temperature and incubation time of SWCNT monodispersed solutions, string-like asse...
A. Ichiyanagi; K. Hirokawa; K. Gomi; T. Nakatsu; H. Kato; N. Kajiyama
Acta Crystallographica Section F: Structural Biology and Crystallization Communications   69(2) 130-133   2013   [Refereed]
D. Pan; T. Nakatsu; H. Kato
Nature Structural and Molecular Biology   20(8) 987-993   2013   [Refereed]
Y. Wang; H. Akiyama; K. Terakado; T. Nakatsu
Scientific Reports   3    2013   [Refereed]
Structural basis for color modulation mechanism of firefly luciferase bioluminescence
Terakado Kanako, Yoshimune Ryosuke, Gomi Keiko, Kajiyama Naoki, Ikeuchi Hideyuki, Hiratake Jun, Kato Hiroaki, Nakatsu Toru
LUMINESCENCE   27(2) 164-165   Mar 2012   [Refereed]
H. Nakano; A. Hosokawa; R. Tagawa; K. Inaka; K. Ohta; T. Nakatsu; H. Kato; K. Watanabe
Acta Crystallographica Section F: Structural Biology and Crystallization Communications   68(7) 757-759   2012   [Refereed]
A. Kawasaki; H. Nakano; A. Hosokawa; T. Nakatsu; H. Kato; K. Watanabe
Journal of Biological Chemistry   285(45) 34972-34980   Nov 2010   [Refereed]
K. Terakado; A. Kodan; H. Nakano; Y. Kimura; K. Ueda; T. Nakatsu; H. Kato
Acta Crystallographica Section D: Biological Crystallography   66 319-323   Mar 2010   [Refereed]
NAKATSU Toru
X-RAYS   52(1) 81-88   Feb 2010
Firefly emits visible yellow-green light. The bioluminescence reaction is carried out by the enzyme luciferase. The bioluminescence of luciferase is widely used as an excellent tool for monitoring gene expression, the measurement of the amount of ...
Y. Sato; H. Shibata; T. Nakatsu; H. Nakano; Y. Kashiwayama; T. Imanaka; H. Kato
EMBO Journal   29(24) 4083-4093   2010   [Refereed]
T. Watabe; Y. Terakawa; K. Watanabe; H. Ohno; H. Nakano; T. Nakatsu; H. Kato; K. Izumi; E. Kodama; M. Matsuoka; K. Kitaura; S. Oishi; N. Fujii
Journal of Molecular Biology   392(3) 657-665   Sep 2009   [Refereed]
Watabe T, Terakawa Y, Watanabe K, Ohno H, Nakano H, Nakatsu T, Kato H, Izumi K, Kodama E, Matsuoka M, Kitaura K, Oishi S, Fujii N.
J Mol Biol.      Sep 2009   [Refereed]
T. Sato; A. Kodan; Y. Kimura; K. Ueda; T. Nakatsu; H. Kato
FEBS Journal   276(13) 3504-3516   Jul 2009   [Refereed]
A. Shimada; M. Ueguchi-Tanaka; T. Nakatsu; M. Nakajima; Y. Naoe; H. Ohmiya; H. Kato; M. Matsuoka
Nature   456(7221) 520-U44   Nov 2008   [Refereed]
W.C. Lung; S. Hayashi; M. Lundberg; T. Nakatsu; H. Kato; K. Morokuma
Journal of the American Chemical Society   130(39) 12880-12881   2008   [Refereed]
Y. Nakahata; M. Yoshida; A. Takano; H. Soma; T. Yamamoto; A. Yasuda; T. Nakatsu; T. Takumi
BMC Molecular Biology   9    2008   [Refereed]
A. Kawasaki; H. Nakano; Y. Tsujimoto; H. Matsui; T. Shimizu; T. Nakatsu; H. Kato; K. Watanabe
Acta Crystallographica Section F: Structural Biology and Crystallization Communications   63(2) 142-144   2007   [Refereed]
T. Nakatsu; S. Ichiyama; J. Hiratake; A. Saldanha; N. Kobashi; K. Sakata; H. Kato
Nature   440(7082) 372-376   2006   [Refereed]
M. Akioka; H. Nakano; A. Horikiri; Y. Tsujimoto; H. Matsui; T. Shimizu; T. Nakatsu; H. Kato; K. Watanabe
Acta Crystallographica Section F: Structural Biology and Crystallization Communications   62(12) 1266-1268   2006   [Refereed]
T. Nakanishi; T. Nakatsu; M. Matsuoka; K. Sakata; H. Kato
Biochemistry   44(4) 1136-1144   2005   [Refereed]
K. Ifuku; T. Nakatsu; R. Shimamoto; Y. Yamamoto; S. Ishihara; H. Kato; F. Sato
Photosynthesis Research   84(1-3) 251-255   2005   [Refereed]
T. Shimizu; H. Shibata; T. Araya; T. Nakatsu; K. Miyairi; T. Okuno; H. Kato
Protein Expression and Purification   44(2) 130-135   2005   [Refereed]
R. Sakaue; T. Nakatsu; Y. Yamaguchi; H. Kato; N. Kajiyama
Acta Crystallographica Section F: Structural Biology and Crystallization Communications   61(2) 196-198   2005   [Refereed]
T. Uzumaki; M. Fujita; T. Nakatsu; F. Hayashi; H. Shibata; N. Itoh; H. Kato; M. Ishiura
Nature Structural and Molecular Biology   11(7) 623-631   Jul 2004   [Refereed]
M. Matsubara; T. Nakatsu; H. Kato; H. Taniguchi
EMBO Journal   23(4) 712-718   Feb 2004   [Refereed]
Shimizu Tetsuya, Nakatsu Toru, Miyairi Kazuo, Okuno Toshikatsu, Kato Hiroaki
Journal of Applied Glycoscience   51(2) 161-167   2004
Three crystal structures of endopolygalacturonase I (EndoPG I) from Stereum purpureum have been determined in this study: the unliganded EndoPG I, the binary and ternary complexes of EndoPG I with galacturonate. Consequently, the structural basis ...
T. Hibi; H. Nii; T. Nakatsu; A. Kimura; H. Kato; J. Hiratake; J. Oda
Proceedings of the National Academy of Sciences of the United States of America   101(42) 15052-15057   2004   [Refereed]
K. Ifuku; T. Nakatsu; H. Kato; F. Sato
EMBO Reports   5(4) 362-367   2004   [Refereed]
X-ray diffraction
T. Nakatsu
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme   49(11 Suppl) 1781-1787   2004   [Refereed]
SHIMIZU Tetsuya, NAKATSU Toru
X-RAYS   45(5) 314-320   Oct 2003
Endopolygalacturonases are involved in the degradation of pectin by hydrolyzing the α-1, 4 glycosidic bonds. Crystal structure of endopolygalacturonase I from Stereum purpureum was solved at atomic (0.96 Å) resolution. The enzyme folds into...
K. Ifuku; T. Nakatsu; H. Kato; F. Sato
Acta Crystallographica - Section D Biological Crystallography   59 1462-1463   Aug 2003   [Refereed]
A. Yamashita; M. Endo; T. Higashi; T. Nakatsu; Y. Yamada; J. Oda; H. Kato
Biochemistry   42(19) 5566-5573   May 2003   [Refereed]
E. Yamauchi; T. Nakatsu; M. Matsubara; H. Kato; H. Taniguchi
Nature Structural Biology   10(3) 226-231   Mar 2003   [Refereed]
K. Irie; T. Nakatsu; K. Mitsuoka; A. Miyazawa; K. Sobue; Y. Hiroaki; T. Doi; Y. Fujiyoshi; H. Kato
Journal of Molecular Biology   318(4) 1117-1126   May 2002   [Refereed]
T. Hibi; H. Hisada; T. Nakatsu; H. Kato; J. Oda
Acta Crystallographica Section D: Biological Crystallography   58(2) 316-318   2002   [Refereed]
T. Shimizu; T. Nakatsu; K. Miyairi; T. Okuno; H. Kato
Biochemistry   41(21) 6651-6659   2002   [Refereed]
S.K. Boehlein; T. Nakatsu; J. Hiratake; R. Thirumoorthy; J.D. Stewart; N.G.J. Richards; S.M. Schuster
Biochemistry   40(37) 11168-11175   Sep 2001   [Refereed]
T. Shimizu; T. Nakatsu; K. Miyairi; T. Okuno; H. Kato
Acta Crystallographica Section D: Biological Crystallography   57(8) 1171-1173   2001   [Refereed]
A. Yamashita; H. Kato; S. Wakatsuki; T. Tomizaki; T. Nakatsu; K. Nakajima; T. Hashimoto; Y. Yamada; J. Oda
Biochemistry   38(24) 7630-7637   Jun 1999   [Refereed]
NAKATSU Toru
X-RAYS   41(2) 129-135   Apr 1999
The crystal structure of Eschelichia coli asparagine synthetase has been determined by X-ray diffraction analysis. The overall structure of the enzyme is remarkably similar to that of the catalytic domain of yeast aspartyl-tRNA synthetase d...
H. Koiwa; H. Kato; T. Nakatsu; J. Oda; Y. Yamada; F. Sato
Journal of Molecular Biology   286(4) 1137-1145   Mar 1999   [Refereed]
M. Koizumi; J. Hiratake; T. Nakatsu; H. Kato; J. Oda
Journal of the American Chemical Society   121(24) 5799-5800   1999   [Refereed]
K. Nakajima; A. Yamashita; H. Akama; T. Nakatsu; H. Kato; T. Hashimoto; J. Oda; Y. Yamada
Proceedings of the National Academy of Sciences of the United States of America   95(9) 4876-4881   Apr 1998   [Refereed]
T. Nakatsu; H. Kato; J. Oda
Nature Structural Biology   5(1) 15-19   Jan 1998   [Refereed]
Purification and characterization of tobacco pathogenesis-related protein PR-5d, an antifungal thaumatin-like protein
H. Koiwa; H. Kato; T. Nakatsu; J. Oda; Y. Yamada; F. Sato
Plant and Cell Physiology   38(7) 783-791   Jul 1997   [Refereed]
T. Nakatsu; H. Kato; J. Oda
Acta Crystallographica Section D: Biological Crystallography   52(3) 604-606   1996   [Refereed]

Misc

 
松岡敬太, 山口知宏, 中津亨, 加藤博章
日本蛋白質科学会年会プログラム・要旨集   17th 50   May 2017
菅原道泰, 鈴木守, 鈴木守, 桝田哲哉, 桝田哲哉, 井上茂之, 井上茂之, SONG Changyong, SONG Changyong, 中根崇智, 溝端栄一, 中津亨, 中津亨, 湯本史明, 南後恵理子, 登野健介, 沼田圭司, 岩田想, 岩田想
日本結晶学会年会講演要旨集   2016 117   Nov 2016
山下恵太郎, 岩田想, 岩田想, 吾郷日出夫, 山本雅貴, 中津亨, 中津亨
放射光   29(4) 204‐212   Jul 2016
宇都宮裕人, 山口知宏, 宮ノ入洋平, 小田健人, 中津亨, 甲斐荘正恒, 加藤博章
日本蛋白質科学会年会プログラム・要旨集   16th 92   May 2016
中津亨
日本蛋白質科学会年会プログラム・要旨集   16th 25   May 2016
小田健人, 山口知宏, 宮ノ入洋平, 盧そう, 宇都宮裕人, 中津亨, 甲斐荘正恒, 加藤博章
日本蛋白質科学会年会プログラム・要旨集   16th 83   May 2016
山下恵太郎, 潘東青, 奥田智彦, 菅原道泰, 小段篤史, 山口知宏, 村井智洋, 溝端栄一, 鈴木守, 南後恵理子, 登野健介, 城地保昌, 亀島敬, 初井宇記, 矢橋牧名, 岩田想, 岩田想, 加藤博章, 加藤博章, 吾郷日出夫, 山本雅貴, 中津亨, 中津亨
日本薬学会年会要旨集(CD-ROM)   136th ROMBUNNO.27M-PM20   2016
山下恵太郎, 潘東青, 長谷川和也, 菅原道泰, 村井智洋, 小段篤史, 溝端栄一, 鈴木守, 鈴木守, 桝田哲哉, 桝田哲哉, 平田邦生, 加藤博章, 加藤博章, 吾郷日出夫, 熊坂崇, 山本雅貴, 中津亨, 中津亨
日本結晶学会年会講演要旨集   2015 89   Oct 2015
長谷川和也, 奥村英夫, 馬場清喜, 水野伸宏, 村上博則, 平田邦生, 山下恵太郎, 上野剛, 吾郷日出夫, 中津亨, 山本雅貴, 熊坂崇
日本結晶学会年会講演要旨集   2015 93   Oct 2015
鉞陽介, 一柳敦, 中津亨, 加藤博章, 五味恵子
日本生物工学会大会講演要旨集   67th 183   Sep 2015
一柳敦, 鉞陽介, 渡辺文太, 中津亨, 加藤博章, 五味恵子
日本生物工学会大会講演要旨集   67th 182   Sep 2015
中津亨
日本生物工学会大会講演要旨集   67th 408   Sep 2015
YAMASHITA Keitaro, PAN Dongqing, SUGAHARA Michihiro, AGO Hideo, YAMAMOTO Masaki, NAKATSU Toru, NAKATSU Toru
生物物理(Web)   55(Supplement 1-2) 1SGP-04 (WEB ONLY)   Aug 2015
一柳敦, 渡辺文太, 五味恵子, 中津亨, 加藤博章
日本農芸化学会大会講演要旨集(Web)   2015 3C22P08 (WEB ONLY)   Mar 2015
中津亨
日本放射光学会年会・放射光科学合同シンポジウム予稿集   28th 31   Jan 2015
佐藤友美, 三歸大知, 中津亨, 加藤博章
日本生化学会大会(Web)   88th 2P0008 (WEB ONLY)   2015
Kawai H., Hasegawa K., Kudo H., Nakastu T., Naitou Y., Takagi Y., Wada Y., Takenobu T., Yanagi K.
Meeting abstracts of the Physical Society of Japan   68(2)    Aug 2013
Kudo H., Yanagi K., Kobayashi H., Suenaga K., Yomogida Y., Takenobu T., Yoshimune R., Nakatsu R.
Meeting abstracts of the Physical Society of Japan   67(1)    Mar 2012