Hiroshi Mamitsuka

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Name
Hiroshi Mamitsuka
Affiliation
Kyoto University
ORCID ID
0000-0002-6607-5617

Published Papers

 
Gillberg Jussi, Marttinen Pekka, Mamitsuka Hiroshi, Kaski Samuel
Bioinformatics   35(20) 4045-4052   Oct 2019   [Refereed]
Sun Lu, Nguyen Canh Hao, Mamitsuka Hiroshi
Proceedings of the Twenty-Eighth International Joint Conference on Artificial Intelligence   3506-3512   Aug 2019   [Refereed]
Sun Lu, Nguyen Canh Hao, Mamitsuka Hiroshi
Proceedings of the Twenty-Eighth International Joint Conference on Artificial Intelligence   3499-3505   Aug 2019   [Refereed]
Eid Abdelrahman Munther, Mamitsuka Hiroshi, Wicker Nicolas
Austrian Journal of Statistics   48(5) 17-33   Jul 2019   [Refereed]
Wicker Nicolas, Nguyen Canh Hao, Mamitsuka Hiroshi
Austrian Journal of Statistics   48(5) 11-16   Jul 2019   [Refereed]
You Ronghui, Yao Shuwei, Xiong Yi, Huang Xiaodi, Sun Fengzhu, Mamitsuka Hiroshi, Zhu Shanfeng
Nucleic Acids Research   47(W1) W379-W387   Jul 2019   [Refereed]
Nguyen Dai Hai, Nguyen Canh Hao, Mamitsuka Hiroshi
Bioinformatics (Proceedings of the 27th International Conference on Intelligent Systems for Molecular Biology (ISMB/ECCB 2019))   35(14) i164-i172   Jul 2019   [Refereed]
Machine Learning for Marketing
Hiroshi Mamitsuka
1-237   Jun 2019
Shuigeng Zhou, Yi-Ping Phoebe Chen, Hiroshi Mamitsuka
IEEE/ACM Transactions on Computational Biology and Bioinformatics   16(2) 350   Mar 2019   [Refereed]
duVerle DA, Mamitsuka H
Methods in molecular biology (Clifton, N.J.)   1915 121-147   2019   [Refereed]
Hiroshi Mamitsuka
Global Data Science Publishing      Sep 2018   [Refereed]
You Ronghui, Zhang Zihan, Xiong Yi, Sun Fengzhu, Mamitsuka Hiroshi, Zhu Shanfeng
Bioinformatics   34(14) 2465-2473   Mar 2018   [Refereed]
Dai Hai Nguyen, Canh Hao Nguyen, Hiroshi Mamitsuka
Briefings in Bioinformatics      Aug 2018   [Refereed]
Kishan Wimalawarne, Makoto Yamada, Hiroshi Mamitsuka
Neural Computation      Aug 2018   [Refereed]
Dai Hai Nguyen, Canh Hao Nguyen, Mamitsuka Hiroshi
Bioinformatics (Proceedings of the 26th International Conference on Intelligent Systems for Molecular Biology (ISMB 2018))   34(13) i323-i332   Jun 2018   [Refereed]
Gao Junning, Yao Shuwei, Mamitsuka Hiroshi, Zhu Shanfeng
PROCEEDINGS 2018 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE (BIBM)   13-20   2018   [Refereed]
Wimalawarne Kishan, Mamitsuka Hiroshi
Advances in Neural Information Processing Systems 31: Annual Conference on Neural Information Processing Systems 2018, NeurIPS 2018, 3-8 December 2018, Montréal, Canada.   31 6902-6910   2018   [Refereed]
Masayuki Karasuyama,Hiroshi Mamitsuka
International Conference on Artificial Intelligence and Statistics, AISTATS 2018, 9-11 April 2018, Playa Blanca, Lanzarote, Canary Islands, Spain   1117-1126   2018   [Refereed]
Hiroshi Mamitsuka
Methods in Molecular Biology   1807    2018   [Refereed]
Mamitsuka H.
Methods in Molecular Biology   1807 v-vi   2018   [Refereed]
Kei-ichiro Takahashi, David A. duVerle, Sohiya Yotsukura, Ichigaku Takigawa, Hiroshi Mamitsuka
Methods in Molecular Biology   1807 95-111   2018   [Refereed]
Jieyao Deng, Qingjun Yuan, Hiroshi Mamitsuka, Shanfeng Zhu
Methods in Molecular Biology   1807 195-202   2018   [Refereed]
Shengwen Peng, Hiroshi Mamitsuka, Shanfeng Zhu
Methods in Molecular Biology   1807 203-209   2018   [Refereed]
Yotsukura Sohiya, Karasuyama Masayuki, Takigawa Ichigaku, Mamitsuka Hiroshi
Briefings in Bioinformatics   18(4) 619-633   2017   [Refereed]
Yamada M, Tang J, Lugo-Martinez J, Hodzic E, Shrestha R, Saha A, Ouyang H, Yin D, Mamitsuka H, Sahinalp C, Radivojac P, Menczer F, Chang Y.
IEEE Transactions on Knowledge and Data Engineering   30(7) 1352-1365   2018   [Refereed]
Mehmet Gönen, Barbara A. Weir, Glenn S. Cowley, Francisca Vazquez, Yuanfang Guan, Alok Jaiswal, Masayuki Karasuyama, Vladislav Uzunangelov, Tao Wang, Aviad Tsherniak, Sara Howell, Daniel Marbach, Bruce Hoff, Thea C. Norman, Antti Airola, Adrian Bivol, Kerstin Bunte, Daniel Carlin, Sahil Chopra, Alden Deran, Kyle Ellrott, Peddinti Gopalacharyulu, Kiley Graim, Samuel Kaski, Suleiman A. Khan, Yulia Newton, Sam Ng, Tapio Pahikkala, Evan Paull, Artem Sokolov, Hao Tang, Jing Tang, Krister Wennerberg, Yang Xie, Xiaowei Zhan, Fan Zhu, Tero Aittokallio, Hiroshi Mamitsuka, Joshua~M. Stuart, Jesse~S. Boehm, David~E. Root, Guanghua Xiao, Gustavo Stolovitzky, William~C. Hahn, Adam~A. Margolin, Bahman Afsari, Antti Airola, Tero Aittokallio, Adrian Bivol, Jesse S. Boehm, Kerstin Bunte, Daniel Carlin, Yu-Chuan Chang, Tenghui Chen, Zechen Chong, Sahil Chopra, Glenn S. Cowley, Alden Deran, Kyle Ellrott, Haitham Elmarakeby, Elana J. Fertig, Emanuel Gon{ç}alves, Mehmet Gönen, Pinghua Gong, Peddinti Gopalacharyulu, Kiley Graim, Yuanfang Guan, Christoph Hafemeister, William C. Hahn, Lenwood Heath, Bruce Hoff, Sara Howell, Alok Jaiswal, Masayuki Karasuyama, Samuel Kaski, {\L}ukasz K{\k{e}}dziorski, Suleiman A. Khan, Niraj Khemka, Erh-kan King, Mario Lauria, Mark Liu, Daniel Machado, Hiroshi Mamitsuka, Daniel Marbach, Adam A. Margolin, Mateusz Mazurkiewicz, Michael P. Menden, Szymon Migacz, Yulia Newton, Sam Ng, Zhi Nie, Thea C. Norman, Tapio Pahikkala, Evan Paull, Paurush Praveen, Corrado Priami, Simone Rizzetto, Miguel Rocha, David E. Root, Cameron Rudd, Witold R. Rudnicki, Julio Saez-Rodriguez, Artem Sokolov, Lei Song, Gustavo Stolovitzky, Joshua M. Stuart, Duanchen Sun, Bence Szalai, Hao Tang, Jing Tang, Aviad Tsherniak, Vladislav Uzunangelov, Francisca Vazquez, Tao Wang, Difei Wang, Barbara A. Weir, Krister Wennerberg, Ling-yun Wu, Guanghua Xiao, Yang Xie, Jieping Ye, Yuting Ye, Xiaowei Zhan, Wanding Zhou, Fan Zhu
Cell Systems   5(5) 485-497   Nov 2017   [Refereed]
Yotsukura, S., duVerle D., Hancock, T., Natsume-Kitatani, Y. and Mamitsuka, H.
Briefings in Bioinformatics   18(1) 9-27   Jan 2017   [Refereed]
Takigawa, I. and Mamitsuka, H.
IEEE Transactions on Pattern Analysis and Machine Intelligence   39(3) 617-624   Mar 2017   [Refereed]
Karasuyama, M. and Mamitsuka, H.
Machine Learning   106(2) 307-335   Feb 2017   [Refereed]
Yamada M, Lian W, Goyal A, Chen J, Wimalawarne K, Khan S.A, Kaski S, Mamitsuka H, Chang Y.
Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining   1215-1224   2017   [Refereed]
Zhou Shuigeng, Chen Phoebe Yi-Ping, Mamitsuka Hiroshi
Journal of Bioinformatics and Computational Biology   14(5)    Oct 2016   [Refereed]
Johnston, I., Hancock, T., Mamitsuka, H. and Carvalho, L.
Annals of Applied Statistics   10(3) 1217-1244   Sep 2016   [Refereed]
Gao, J., Yamada, M., Kaski, S., Mamitsuka, H. and Zhu, S.
Proceedings of the 25th International Joint Conference on Artificial Intelligence (IJCAI 2016)   1476-1482   Jul 2016   [Refereed]
Mohamed, A., Nguyen, C. H. and Mamitsuka, H.
Bioinformatics   32(13) 2067-2068   Jul 2016   [Refereed]
Peng, S., You, R., Wang, H., Zhai, C., Mamitsuka, H. and Zhu, S.
Bioinformatics (Proceedings of the 24th International Conference on Intelligent Systems for Molecular Biology (ISMB 2016))   32(12) i70-i78   Jun 2016   [Refereed]
Yuan, Q.-J., Gao, J., Wu, D., Zhang, S., Mamitsuka, H. and Zhu, S.
Bioinformatics (Proceedings of the 24th International Conference on Intelligent Systems for Molecular Biology (ISMB 2016))   32(12) i18-i27   Jun 2016   [Refereed]
Nguyen, C. H. and Mamitsuka, H.
JMLR Workshop and Conference Proceedings (Proceedings of the Nineteenth International Conference on Artificial Intelligence and Statistics (AISTATS 2016))   51 639-647   May 2016   [Refereed]
Xu, Y., Luo, C., Mamitsuka, H. and Zhu, S.
Methods in Molecular Biology   1404 753-760   Apr 2016   [Refereed]
Shinkai-Ouchi, F., Koyama, S., Ono, Y., Hata, S., Ojima, K., Shindo, M., duVerle, D., Kitamura, F., Doi, N., Takigawa, I., Mamitsuka, H. and Sorimachi, H.
Molecular and Cellular Proteomics   15(4) 1262-1280   Apr 2016   [Refereed]
Natsume-Kitatani, Y. and Mamitsuka, H.
PLoS One   11(3) e0151917   Mar 2016   [Refereed]
Mohamed, A., Nguyen, C. H. and Mamitsuka, H.
Briefings in Bioinformatics   17(2) 309-321   Mar 2016   [Refereed]
Nakamura, A., Takigawa, I., Tosaka, H., Kudo, M. and Mamitsuka, H.
Discrete Applied Mathematics   200 123-152   Feb 2016   [Refereed]
Wicker, N., Nguyen, C. H. and Mamitsuka, H.
Publications Mathématiques de Besançon: Algèbre et Théorie des Nombres   85-94   2016   [Refereed]
Yotsukura, S., Karasuyama, M., Takigawa, I. and Mamitsuka, H.
Big Data Analytics in Genomics   397-428   2016   [Refereed]
Zhou, J., Shui, Y., Peng, S., Li, X., Mamitsuka, H. and Zhu, S.
Journal of Bioinformatics and Computational Biology   13(6) 1542002   Dec 2015   [Refereed]
Baba, H, Takahara, J. and Mamitsuka, H.
Pharmaceutical Research   32(7) 2360-2371   Jul 2015   [Refereed]
Zheng, X., Zhu, S., Gao, J. and Mamitsuka, H.
Proceedings of the 24th International Joint Conference on Artificial Intelligence (IJCAI 2015)   4091-4097   Jul 2015   [Refereed]
Wang, B., Chen, X., Mamitsuka, H. and Zhu, S.
IEEE/ACM Transactions on Computational Biology and Bioinformatics   12(6) 1286-1294   Jun 2015   [Refereed]
Shiga, M. and Mamitsuka, H.
IEEE Transactions on Knowledge and Data Engineering   27(6) 1615-1628   Jun 2015   [Refereed]
Liu, K., Peng, S., Wu, J., Zhai, C., Mamitsuka H. and Zhu S.
Bioinformatics (Proceedings of the 23rd International Conference on Intelligent Systems for Molecular Biology (ISMB/ECCB 2015))   31(12) i339-i347   Jun 2015   [Refereed]
Yotsukura, S. and Mamitsuka, H.
Critical Reviews in Oncology/Hematology   93(2) 103-115   Feb 2015   [Refereed]
Mohamed, A., Hancock, T., Nguyen, C. H. and Mamitsuka, H.
Bioinformatics   30(21) 3139-3141   Nov 2014   [Refereed]
Ding, H., Takigawa, I., Mamitsuka, H. and Zhu, S.
Briefings in Bioinformatics   15(5) 737-747   Sep 2014   [Refereed]
Nguyen, C. H., Wicker, N. and Mamitsuka, H.
IEEE Transactions on Neural Networks and Learning Systems   25(7) 1407-1412   Jul 2014   [Refereed]
Kayano, M., Shiga, M. and Mamitsuka, H.
IEEE/ACM Transactions on Computational Biology and Bioinformatics   11(1) 154-167   Jan 2014   [Refereed]
Karasuyama, M. and Mamitsuka, H.
IEEE Transactions on Neural Networks and Learning Systems   24(12) 1999-2012   Dec 2013   [Refereed]
Takahashi, K., Takigawa, I. and Mamitsuka, H.
PLoS ONE   8(12) e82890   Dec 2013   [Refereed]
Karasuyama, M. and Mamitsuka, H.
Proceedings of the Twenty-Seventh Annual Conference on Neural Information Processing Systems (NIPS 2013)   1547-1555   Dec 2013   [Refereed]
Zheng, X., Ding, H., Mamitsuka, H. and Zhu, S.
Proceedings of the Nineteenth ACM SIGKDD International Conference On Knowledge Discovery and Data Mining (KDD 2013)   1025-1033   Aug 2013   [Refereed]
Shiga, M. and Mamitsuka, H.
Proceedings of the 4th MultiClust Workshop on Multiple Clusterings, Multi-view Data, and Multi-source Knowledge-driven Clustering (MultiClust 2013)   Article No.5   Aug 2013   [Refereed]
Nakamura, A., Saito, T., Takigawa, I., Kudo, M. and Mamitsuka, H.
Discrete Applied Mathematics   161(10-11) 1556-1575   Jul 2013   [Refereed]
Gu, J., Feng, W., Zeng, J., Mamitsuka, H. and Zhu, S.
IEEE Transactions on Cybernetics   43(4) 1265-1276   Jul 2013   [Refereed]
Wicker, N., Nguyen, C. H. and Mamitsuka, H.
Linear Algebra and Its Applications   438(5) 2331-2338   Mar 2013   [Refereed]
Yamamoto, T., Nakayama, K., Hirano, H., Tomonaga, T., Ishihama, Y., Yamada, T., Kondo, T., Kodera, Y., Sato, Y., Araki, N., Mamitsuka, H. and Goshima, N.
Journal of Proteome Research   12(1) 58-61   Jan 2013   [Refereed]
Takigawa, I. and Mamitsuka, H.
Drug Discovery Today   18(1-2) 50-57   Jan 2013   [Refereed][Invited]
Mamitsuka, H., DeLisi, C., and Kanehisa, M.
Methods in Molecular Biology   939 v-vii   2013
Machine learning sequence classification techniques: Application to cysteine protease cleavage prediction
duVerle, D. A. and Mamitsuka, H.
Current Bioinformatics   7(4) 415-423   Dec 2012   [Refereed]
Hancock. T. and Mamitsuka, H.
IEEE Transactions on Neural Networks and Learning Systems   23(11) 1767-1778   Nov 2012   [Refereed]
Nguyen, C. H. and Mamitsuka, H.
IEEE Transactions on Neural Networks and Learning Systems   23(11) 1793-1804   Nov 2012   [Refereed]
Sorimachi, H., Mamitsuka, H. and Ono, Y.
Biological Chemistry   393(9) 853-871   Sep 2012   [Refereed][Invited]
Mamitsuka, H.
Wiley Interdisciplinary Reviews: Data Mining and Knowledge Discovery   2(5) 400-410   Sep 2012   [Refereed][Invited]
duVerle, D. A. and Mamitsuka, H.
Briefings in Bioinformatics   13(3) 337-349   May 2012   [Refereed]
Zhang, L, Udaka, K, Mamitsuka, H. and Zhu, S.
Briefings in Bioinformatics   13(3) 350-364   May 2012   [Refereed]
Shiga, M. and Mamitsuka, H.
IEEE Transactions on Knowledge and Data Engineering   24(4) 577-589   Apr 2012   [Refereed]
Shiga, M. and Mamitsuka, H.
Pattern Recognition   45(3) 1035-1049   Mar 2012   [Refereed]
Zhang, L, Chen, Y., Wong, H.-S., Zhou, S., Mamitsuka, H. and Zhu, S.
PLoS ONE   7(2) e30483   Feb 2012   [Refereed]
Hancock, T, Wicker, N., Takigawa, I. and Mamitsuka, H.
PLoS ONE   7(2) e31345   Feb 2012   [Refereed]
Hu, X., Mamitsuka, H. and Zhu, S.
Journal of Immunological Methods   374(1-2) 47-52   Nov 2011   [Refereed]
Shiga, M. and Mamitsuka, H.
Wiley Interdisciplinary Reviews: Data Mining and Knowledge Discovery   1(6) 496-511   Nov 2011   [Refereed][Invited]
Nguyen, C. H. and Mamitsuka, H.
IEEE Transactions on Neural Networks   22(9) 1395-1405   Sep 2011   [Refereed]
Nguyen, C. H. and Mamitsuka, H.
Lecture Notes in Computer Science (Proceedings of the European Conference on Machine Learning and Principles and Practice of Knowledge Discovery of Databases (ECML/PKDD 2011))   6912(II) 517-532   Sep 2011   [Refereed]
Natsume-Kitatani, Y., Shiga, M. and Mamitsuka, H.
PLoS ONE   6(7) e22281   Jul 2011   [Refereed]
Kayano, M., Takigawa, I., Shiga, M., Tsuda, K. and Mamitsuka, H.
Nucleic Acids Research   39(11) e74   Jun 2011   [Refereed]
duVerle, D., Ono, Y., Sorimachi, H. and Mamitsuka, H.
PLoS ONE   6(5) e19035   May 2011   [Refereed]
Takigawa, I., Tsuda, K. and Mamitsuka, H.
PLoS ONE   6(2) e16999   Feb 2011   [Refereed]
Shiga, M., Takigawa, I. and Mamitsuka, H.
Pattern Recognition   44(2) 236-251   Feb 2011   [Refereed]
Takigawa, I. and Mamitsuka, H.
Machine Learning   82(2) 95-121   Feb 2011   [Refereed]
Mamitsuka, H.
Chimia   65(1-2) 10-13   Jan 2011   [Invited]
Takigawa, I., Hashimoto, K., Shiga, M., Kanehisa, M. and Mamitsuka, H.
Proceedings of the International Beilstein Symposium on Glyco-Bioinformatics   13-24   Dec 2010
Li, L., Ching, W-K., Chan, Y-M. and Mamitsuka, H.
Journal of Systems Science and Complexity   23(5) 917-930   Oct 2010   [Refereed]
Nakamura, A., Saito, T., Takigawa, I., Mamitsuka, H. and Kudo, M.
Lecture Notes in Computer Science (Proceedings of the Seventeenth Symposium on String Processing and Information Retrieval (SPIRE 2010))   6393 185-190   Oct 2010   [Refereed]
Hancock, T., Takigawa, I. and Mamitsuka, H.
Bioinformatics   26(17) 2128-2135   Sep 2010   [Refereed]
Lam, T. H., Mamitsuka, H., Ren, E. C., and Tong, J. C.
Immunome Research (Proceedings of the Ninth International Conference on Bioinformatics (InCoB 2010))   6(SUPPL. 1) S6   Sep 2010   [Refereed]
Shiga, M. and Mamitsuka, H.
Proceedings of the IEEE International Workshop on Machine Learning for Signal Processing (MLSP 2010)   166-171   Sep 2010   [Refereed]
Hu, X., Zhou, W., Udaka, K., Mamitsuka, H. and Zhu, S.
Nucleic Acids Research   38 W474-W479   Jul 2010   [Refereed]
Kayano, M., Takigawa, I., Shiga, M., Tsuda, K. and Mamitsuka, H.
Genome Informatics (Proceedings of the Tenth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2010))   24 69-83   Jul 2010   [Refereed]
Hancock, T. and Mamitsuka, H.
JMLR Workshop and Conference Proceedings (Proceedings of the Thirteenth International Conference on Artificial Intelligence and Statistics (AISTATS 2010))   9 305-312   May 2010   [Refereed]
Hancock, T. and Mamitsuka, H.
Algorithms for Molecular Biology   5(1) 10   Jan 2010   [Refereed]
Wan, R., Kiseleva, L., Harada, H., Mamitsuka, H. and Horton, P.
Source Code for Biology and Medicine   4(1) Article 8   Dec 2009   [Refereed]
Kayano, M., Takigawa, I., Shiga, M., Tsuda, K. and Mamitsuka, H.
Bioinformatics   25(21) 2735-2743   Nov 2009   [Refereed]

Books etc

 
Machine Learning for Marketing
Hiroshi Mamitsuka
Global Data Science Publishing   Jun 2019   ISBN:9784991044526
Textbook of Machine Learning and Data Mining (with Bioinformatics Applications)
Hiroshi Mamitsuka
Global Data Science Publishing   Sep 2018   ISBN:9784991044502
Methods in Molecular Biology, Volume 1807: Data Mining for Systems Biology: Methods and Protocols, 2nd Edition
Hiroshi Mamitsuka (Part:Editor)
Humana Press (Springer)   2018   ISBN:9781493985609
Methods in Molecular Biology, Volume 993: In Silico Models for Drug Discovery
Takigawa, I., Tsuda, K. and Mamitsuka, H. (Part:Contributor, An In Silico Model for Interpreting Polypharmacology in Drug-Target Networks.)
Humana Press (Springer)   Apr 2013   ISBN:978-1-62703-341-1
Methods in Molecular Biology, Volume 939: Data Mining for Systems Biology: Methods and Protocols
Mamitsuka, H., DeLisi, C., and Kanehisa, M. (Part:Joint Editor)
Humana Press (Springer)   Nov 2012   ISBN:978-1-62703-106-6
Identifying Pathways of Co-ordinated Gene Expression.
Hancock, T., Takigawa, I. and Mamitsuka, H. (Part:Contributor, Identifying Pathways of Co-ordinated Gene Expression.)
Humana Press (Springer)   Nov 2012   ISBN:978-1-62703-107-3
Biological Data Mining in Protein Interaction Networks.
Wan, R. and Mamitsuka, H. (Part:Contributor, Discovering Network Motifs in Protein Interaction Networks.)
IGI Global   May 2009   ISBN:978-1-60566-398-2
Genome Informatics, Volume 19
Ng, S.-K., Mamitsuka, H. and Wong, L. (Part:Joint Editor)
Imperial College Press   2007   ISBN:1-86094-984-3
Genome Informatics, Volume 16, No. 2
Heinrich, R., Mamitsuka, H., Kanehisa, M., Takagi, T. and Miyano, S. (Part:Joint Editor)
Universal Academy Press   2005   ISBN:4-946443-96-7
Genome Informatics, Volume 15, No.1
Mamitsuka, H., Smith, T. F., Holzhutter, H.-G., Kanehisa, M., DeLisi, C., Heinrich, R. and Miyano, S. (Part:Joint Editor)
Universal Academy Press   2004   ISBN:4-946443-88-6
Lecture Notes in Computer Science, Vol. 2281: Progress in Discovery Science
Mamitsuka, H. and Abe, N. (Part:Contributor, Efficient Data Mining by Active Learning)
Springer Berlin Heidelberg   Apr 2002   ISBN:978-3540433385
Foundations of Real World Intelligence
Abe, N., Yamanishi, K., Nakamura, A., Mamitsuka, H., Takeuchi, J. and Li, H. (Part:Contributor, Distributed and Active Learning.)
Center for the Study of Language and Information (CSLI) Publications   Sep 2001   ISBN:978-1575863382

Conference Activities & Talks

 
Hiroshi Mamitsuka
DSx Conference 2019   26 Nov 2019   Perdana University
Graph-smooth, Data-integrative Machine Learning for Bioinformatics
Hiroshi Mamitsuka
Seminar   20 Aug 2019   Shenzhen University
Hiroshi Mamitsuka
Seminar   28 Jun 2019   Perdana University
Similarity-based Machine Learning Approaches for Predicting Drug-Target Interactions [Invited]
Hiroshi Mamitsuka
Seminar   26 Jun 2019   University of Malaya
Graph-regularized, Data-integrative Machine Learning for Bioinformatics [Invited]
Hiroshi Mamitsuka
Seminar   21 Jun 2019   Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences
Graph-based Machine Learning [Invited]
Hiroshi Mamitsuka
Seminar   20 Jun 2019   Fudan University
Graph-based Machine Learning [Invited]
Hiroshi Mamitsuka
Workshop on Bioinformatics and Data Analysis   14 Jun 2019   Xi'an Jiao Tong University
Graph-based Machine Learning
Hiroshi Mamitsuka
Seminar   10 May 2019   Kyushu Institute of Technology
Graph-regularized, Data-integrative Machine Learning for Bioinformatics [Invited]
Hiroshi Mamitsuka
Seminar   17 Nov 2018   Ho Chi Minh City National University of Science
Hiroshi Mamitsuka
5th SHTP Annual International Conference 2018   16 Nov 2018   
Hiroshi Mamitsuka
Second Belgrade BioInformatics Conference (BelBi 2018)   21 Jun 2018   
Hiroshi Mamitsuka
Seminar   22 Mar 2018   ThuyLoi University
The big data era is facing various types of data, while the most emerging data are semi-structured, particularly networks or graphs, such as transportation network, internet, world wide web, social networks, etc. A particular feature of the mod...
Hiroshi Mamitsuka
Seminar   20 Mar 2018   Hanoi University of Science and Technology
Hiroshi Mamitsuka
Sixth International Symposium on Integrated Uncertainty in Knowledge Modelling and Decision Making (IUKM 2018)   16 Mar 2018   
Collaborative Matrix Factorization for Predicting Drug-Target Interactions
Hiroshi Mamitsuka
Internal Seminar   20 Apr 2017   Keio University
Hiroshi Mamitsuka
Seminar, Machine Learning Coffee Series   27 Mar 2017   University of Helsinki and Aalto University
Hiroshi Mamitsuka
Fifth International Symposium on Integrated Uncertainty in Knowledge Modeling and Decision Making (IUKM 2016)   30 Nov 2016   
Collaborative Matrix Factorization for Predicting Drug-Target Interactions
Hiroshi Mamitsuka
Seminar   29 Nov 2016   University of Engineering and Technology, National University of Vietnam in Hanoi
Label Propagation over Multiple Graphs
Hiroshi Mamitsuka
Seminar   28 Nov 2016   Hanoi University of Science and Technology
Hiroshi Mamitsuka
'The Biology of Calpain in Health and Disease', FASEB Science Research Conference   17 Jul 2016   
Collaborative Matrix Factorization for Predicting Drug-Target Interactions [Invited]
Hiroshi Mamitsuka
Seminar   3 Dec 2015   Humboldt-Universitat zu Berlin
Hiroshi Mamitsuka
Caroline von-Humboldt Professorship Award Ceremony   1 Dec 2015   Humboldt-Universitat zu Berlin
Panel session [Invited]
Hiroshi Mamitsuka
CIM Workshop on Machine Learning   9 Oct 2015   Uppsala University
Hiroshi Mamitsuka
CIM Workshop on Machine Learning   8 Oct 2015   Uppsala University
Collaborative Matrix Factorization for Predicting Drug-Target Interactions [Invited]
Hiroshi Mamitsuka
Seminar   21 Jan 2015   National Tsing Hua University
Mining from Biological Networks: Preserving Network Localities [Invited]
Hiroshi Mamitsuka
Seminar   24 Oct 2014   Fudan University
Mining from Biological Networks: Preserving Network Localities [Invited]
Hiroshi Mamitsuka
Seminar   30 Sep 2014   Lille 1 University
Hiroshi Mamitsuka
Sweden-Kyoto Symposium 2014   12 Sep 2014   Kyoto University
Hiroshi Mamitsuka
2014 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology   22 May 2014   Computational Intelligence Society, IEEE
Hiroshi Mamitsuka
2014 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology   21 May 2014   Computational Intelligence Society, IEEE
Mining Metabolic Pathways through Gene Expression [Invited]
Hiroshi Mamitsuka
euSYSBIO ? Master・Efs Degree Programme in Computational and Systems Biology   28 Apr 2014   Erasmus Mundus
Mining Patterns from Trees [Invited]
Hiroshi Mamitsuka
euSYSBIO ? Master・Efs Degree Programme in Computational and Systems Biology   25 Apr 2014   Erasmus Mundus
Mining Patterns from Sequences: Hidden Markov Models and Learning [Invited]
Hiroshi Mamitsuka
euSYSBIO ? Master・Efs Degree Programme in Computational and Systems Biology   24 Apr 2014   Erasmus Mundus
Hiroshi Mamitsuka
Seminar, Lille 1 University   26 Mar 2014   Centre Europ?en pour les Math?matiques, la Physique et leurs interactions (CEMPI)
Hiroshi Mamitsuka
Trends in Machine Learning (TML) 2014   18 Mar 2014   Kyoto University
Hiroshi Mamitsuka
Seminar   3 Feb 2014   Aalto University
Hiroshi Mamitsuka
Seminar   20 Dec 2013   National University of Singapore
Hiroshi Mamitsuka
Seminar   19 Dec 2013   Institute for Infocomm Research (I2R), A*STAR, Singapore
Hiroshi Mamitsuka
24th International Conference on Genome Informatics (GIW 2013)   17 Dec 2013   
Hiroshi Mamitsuka
The HUPO Initiative Assembly in Kyoto   19 Sep 2013   HUPO
Hiroshi Mamitsuka
Kyoto University - Koc University Symposium ``New Frontiers in Health Sciences & Technologies"   7 Sep 2013   Kyoto University
Hiroshi Mamitsuka
2013 International Workshop on Machine Learning and Applications to Biology   5 Aug 2013   Hokkaido University
Hiroshi Mamitsuka
13th Annual International Workshop on Bioinformatics and Systems Biology   31 Jul 2013   
Hiroshi Mamitsuka
FASEB Science and Research Conference, ``The Biology of Calpains in Health and Disease''   22 Jul 2013   Federation of American Societies for Experimental Biology (FASEB)
Hiroshi Mamitsuka
Seminar   8 Mar 2013   Mitsubishi Electric Research Laboratories
Label Propagation over Graphs [Invited]
Hiroshi Mamitsuka
Seminar   17 Dec 2012   Noah's Ark Lab, Huawei
Hiroshi Mamitsuka
Kyoto University - Durham University Joint International Symposium   28 Nov 2012   
Label Propagation over Graphs [Invited]
Hiroshi Mamitsuka
Seminar   8 Oct 2012   IBM T. J. Watson Research Center
Mining Subgraph-Subsequence Pairs from Drug-Target Network [Invited]
Hiroshi Mamitsuka
2012 Workshop on Pharmaco-Informatics for Drug Discovery, in Conjunction with 2012 IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2012)   4 Oct 2012   Computer Society, IEEE
Opening Remark [Invited]
Hiroshi Mamitsuka
2012 Sapporo Workshop on Machine Learning and Application to Biology (MLAB)   6 Aug 2012   Hokkaido University
Hiroshi Mamitsuka
Faculty Lab Presentation, International Workshop of Bioinformatics and Systems Biology 2012   26 Jul 2012   Boston University
Clustering over Graphs: Probabilistic Model based Approach [Invited]
Hiroshi Mamitsuka
Seminar in Information Systems and Applications   23 Nov 2011   National Tsing Hua University
Label Propagation over Graphs
Hiroshi Mamitsuka
Seminar, National Tsing Hua University   22 Nov 2011   National Tsing Hua University
Efficient Label Propagation over Graphs
Hiroshi Mamitsuka
Seminar   14 Nov 2011   Fudan University
Hiroshi Mamitsuka
Invited Tutorial, 2011 International Conference on Neural Information Processing (ICONIP), Tutorials   13 Nov 2011   
Opening Remark [Invited]
Hiroshi Mamitsuka
ICR Symposium to Celebrate the Bioinformatics Center's 10 Year Anniversary and New Restructuring   29 Aug 2011   Institute for Chemical Research (ICR), Kyoto University
Hiroshi Mamitsuka
FICS Summer School   24 Aug 2011   Finnish Doctoral Programme in Computational Sciences (FICS)
Hiroshi Mamitsuka
Summer School 2011   22 Jul 2011   Computational Systems Biology, DFG-GRADUIERTENKOLLEG 1772 - Research Training Group
Hiroshi Mamitsuka
Seminar   26 May 2011   University of Strasbourg
PathRanker: Mining Metabolic Pathways through Gene Expression [Invited]
Hiroshi Mamitsuka
Seminar   24 May 2011   Institute of Genetics and Molecular and Cellular Biology (IGBMC), University of Strasbourg
Mining Significant Substructure Pairs from Drug-Target Network [Invited]
Hiroshi Mamitsuka
Seminar   16 May 2011   Fudan University
Hiroshi Mamitsuka
The 2nd Workshop on Bioinformatics for Medical and Pharmaceutical Research   28 Feb 2011   Curie Institute
Mining Metabolic Pathways through Gene Expression [Invited]
Hiroshi Mamitsuka
Seminar   23 Feb 2011   Humboldt University, Computational Systems Biology, DFG-GRADUIERTENKOLLEG 1772 - Research Training Group
Clustering over Graphs: Probabilistic Model based Approach [Invited]
Hiroshi Mamitsuka
Seminar   20 Jan 2011   National Cheng Kung University
Clustering Genes by Using Expression and Gene Network Topology [Invited]
Hiroshi Mamitsuka
Seminar   19 Jan 2011   National Cheng Kung University
Mining Metabolic Pathways through Gene Expression [Invited]
Hiroshi Mamitsuka
Seminar   30 Dec 2010   Fudan University
Clustering over Graphs: Probabilistic Model Based Approach [Invited]
Hiroshi Mamitsuka
Seminar   28 Dec 2010   Shanghai Jiao Tong University
Mining Metabolic Pathways through Gene Expression [Invited]
Hiroshi Mamitsuka
Seminar   27 Dec 2010   Shanghai Institutes for Biological Sciences
Mining Metabolic Pathways through Gene Expression [Invited]
Hiroshi Mamitsuka
Seminar   10 Dec 2010   Boston College
Clustering Genes by Using Expression and Gene Network Topology [Invited]
Hiroshi Mamitsuka
Seminar   8 Dec 2010   Boston University
Mining Metabolic Pathways through Gene Expression [Invited]
Hiroshi Mamitsuka
2010 Systems Biology and Bioinformatics Symposium (SBBS)   5 Nov 2010   Taiwan Society for Bioinformatics and Systems Biology (TBSB)
Probabilistic Model Learning for Clustering with Multiple Graphs [Invited]
Hiroshi Mamitsuka
Seminar   18 Oct 2010   Fudan University
Probabilistic Model Learning for Clustering with Multiple Graphs [Invited]
Hiroshi Mamitsuka
Seminar   15 Oct 2010   SooChow University
Clustering over Graphs [Invited]
Hiroshi Mamitsuka
Second International Seminar on Business and Information Management (ISBIM 2010)   13 Sep 2010   
Ranking Metabolic Paths Based on Adjacent Pairwise Coexpression [Invited]
Hiroshi Mamitsuka
Seminar   13 May 2010   Fudan University
Efficiently Detecting a Switching Mechanism in Gene Expression [Invited]
Hiroshi Mamitsuka
Seminar   22 Mar 2010   Curie Institute
Efficiently Finding a Switching Mechanism in Gene Expression [Invited]
Hiroshi Mamitsuka
Seminar   16 Mar 2010   Fudan University
Mining Significant Patterns from Carbohydrate Sugar Chains [Invited]
Hiroshi Mamitsuka
Seminar   9 Oct 2009   Humboldt University
Hiroshi Mamitsuka
International Beilstein Symposium on Glyco-Bioinformatics   5 Oct 2009   Beilstein Institute
A Markov Classification Model for Metabolic Pathways [Invited]
Hiroshi Mamitsuka
Seminar   29 Sep 2009   Fudan University
Hiroshi Mamitsuka
TISE Summer School on Statistical Modeling and Machine Leraning in Computational Systems Biology   24 Jun 2009   Tampere Graduate School in Information Science and Engineering (TISE)
Hiroshi Mamitsuka
TISE Summer School on Statistical Modeling and Machine Leraning in Computational Systems Biology   24 Jun 2009   Tampere Graduate School in Information Science and Engineering (TISE)
Hiroshi Mamitsuka
TISE Summer School on Statistical Modeling and Machine Leraning in Computational Systems Biology   22 Jun 2009   Tampere Graduate School in Information Science and Engineering (TISE)
Clustering with Heterogeneous Data [Invited]
Hiroshi Mamitsuka
IEEE International Conference on Computational Intelligence and Natural Computing (CINC 2009)   6 Jun 2009   
Mining Significant Patterns from Trees [Invited]
Hiroshi Mamitsuka
Seminar   28 May 2009   Universit? Louis Pasteur
A Probabilistic Model-based Approach for Mining Chemical Compound-Gene Co-occurrences from Biomedical Texts [Invited]
Hiroshi Mamitsuka
Seminar   25 May 2009   Universit? Louis Pasteur
Hiroshi Mamitsuka
Bioinformatics Workshop   13 May 2009   Shanghai Key Laboratory of Intelligent Information Processing
Mining Significant Patterns from Trees [Invited]
Hiroshi Mamitsuka
Seminar   24 Mar 2009   I2R, A*STAR, Singapore
Hiroshi Mamitsuka
IEEE International Symposium on Knowledge Acquisition and Modeling (KAM 2008)   21 Dec 2008   Beijin Section, IEEE; HuaZhong Normal Uniersity
Clustering Genes with Microarray Expressions and Gene Networks [Invited]
Hiroshi Mamitsuka
Seminar   22 Oct 2008   Max Planck Institute for Biological Cybernetics
Clustering Numerical Vectors with a Modularity Network [Invited]
Hiroshi Mamitsuka
Workshop on "Relations with Computer Science", Foundations of Computational Mathematics (FoCM'08)   22 Jun 2008   
Clustering Numerical Vectors with a Modularity Network [Invited]
Hiroshi Mamitsuka
Seminar   27 May 2008   University of Melbourne
Data-integrative Informatics for Chemical Genomics [Invited]
Hiroshi Mamitsuka
Systems Biology Workshops - From Molecules to Life -   27 May 2008   
Clustering Numerical Vectors with Modularity Networks [Invited]
Hiroshi Mamitsuka
Seminar   13 Dec 2007   Helsinki University of Technology
Opening Address [Invited]
Hiroshi Mamitsuka
Eighteenth International Conference on Genome Informatics   3 Dec 2007   
Hiroshi Mamitsuka
AASBi Symposium   2 Dec 2007   The Association of Asian Societies for Bioinformatics (AASBi)
Clustering Numerical Vectors with Modularity Networks [Invited]
Hiroshi Mamitsuka
Seminar   28 Nov 2007   Institute for Infocomm Research (I2R), A*STAR, Singapore
Hiroshi Mamitsuka
International Conference on Intelligent Computing (ICIC 2007)   22 Aug 2007   
Clustering Numerical Vectors with a Modular Network [Invited]
Hiroshi Mamitsuka
Seminar   10 Aug 2007   University of California, Berkeley
Closing Remark [Invited]
Hiroshi Mamitsuka
International Symposium on Bioinformatics Education and Research   17 Dec 2006   Education and Research Organization for Genome Information Science

Patents

 
US 6973446 : Knowledge finding method
Mamitsuka, H. and Abe, N.