Shohei Yamaoka

Profile Information

Affiliation: Graduate School of Biostudies, Kyoto University

Degree: 博士（農学）(京都大学)

J-GLOBAL ID: 201401082716309740
researchmap Member ID: 7000009028

Research Areas

Life sciences / Plants: molecular biology and physiology /

Papers

The mutation of CaCKI1 causes seedless fruits in chili pepper (Capsicum annuum).

Takahiro Maki, Hirokazu Kusaka, Yuki Matsumoto, Akira Yamazaki, Shohei Yamaoka, Sho Ohno, Motoaki Doi, Yoshiyuki Tanaka

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 136(4) 85-85, Mar 25, 2023
植物細胞の分化運命の制御と可塑性

丸山大輔, 水多陽子, 山岡尚平

植物科学の最前線, 14(A) 1-2, 2023
花粉とコケ植物配偶体の発生における配偶子前駆細胞の分化

山岡尚平

植物科学の最前線, 14(A) 10-20, 2023
Possible molecular mechanisms of persistent pollen tube growth without de novo transcription

Kazuki Motomura, Naoya Sugi, Atsushi Takeda, Shohei Yamaoka, Daisuke Maruyama

Frontiers in Plant Science, 13, Nov 24, 2022 Peer-reviewed
MarpolBase Expression: A Web-based, Comprehensive Platform for Visualization and Analysis of Transcriptomes in the Liverwort Marchantia polymorpha

Shogo Kawamura, Facundo Romani, Masaru Yagura, Takako Mochizuki, Mika Sakamoto, Shohei Yamaoka, Ryuichi Nishihama, Yasukazu Nakamura, Katsuyuki T Yamato, John L Bowman, Takayuki Kohchi, Yasuhiro Tanizawa

Plant and Cell Physiology, Sep 9, 2022
Land plant gametogenesis is a flexible sytem

Shohei Yamaoka

The Cell, 54(6) 44-48, May, 2022 InvitedLead authorCorresponding author
Diminished Auxin Signaling Triggers Cellular Reprogramming by Inducing a Regeneration Factor in the Liverwort Marchantia polymorpha.

Sakiko Ishida, Hidemasa Suzuki, Aya Iwaki, Shogo Kawamura, Shohei Yamaoka, Mikiko Kojima, Yumiko Takebayashi, Katsushi Yamaguchi, Shuji Shigenobu, Hitoshi Sakakibara, Takayuki Kohchi, Ryuichi Nishihama

Plant & cell physiology, 63(3) 384-400, Mar 11, 2022 Peer-reviewed
Identification of the sex-determining factor in the liverwort Marchantia polymorpha reveals unique evolution of sex chromosomes in a haploid system.

Miyuki Iwasaki, Tomoaki Kajiwara, Yukiko Yasui, Yoshihiro Yoshitake, Motoki Miyazaki, Shogo Kawamura, Noriyuki Suetsugu, Ryuichi Nishihama, Shohei Yamaoka, Dierk Wanke, Kenji Hashimoto, Kazuyuki Kuchitsu, Sean A Montgomery, Shilpi Singh, Yasuhiro Tanizawa, Masaru Yagura, Takako Mochizuki, Mika Sakamoto, Yasukazu Nakamura, Chang Liu, Frédéric Berger, Katsuyuki T Yamato, John L Bowman, Takayuki Kohchi

Current biology : CB, 31(24) 5522-5532, Dec 20, 2021 Peer-reviewed
Deep evolutionary origin of gamete-directed zygote activation by KNOX/BELL transcription factors in green plants.

Tetsuya Hisanaga, Shota Fujimoto, Yihui Cui, Katsutoshi Sato, Ryosuke Sano, Shohei Yamaoka, Takayuki Kohchi, Frédéric Berger, Keiji Nakajima

eLife, 10, Sep 28, 2021 Peer-reviewed
Coordination between growth and stress responses by DELLA in the liverwort Marchantia polymorpha.

Jorge Hernández-García, Rui Sun, Antonio Serrano-Mislata, Keisuke Inoue, Carlos Vargas-Chávez, David Esteve-Bruna, Vicent Arbona, Shohei Yamaoka, Ryuichi Nishihama, Takayuki Kohchi, Miguel A Blázquez

Current biology : CB, 31(16) 3678-3686, Aug 23, 2021 Peer-reviewed
Regulation of gametangia and gametangiophore initiation in the liverwort Marchantia polymorpha.

Shohei Yamaoka, Keisuke Inoue, Takashi Araki

Plant reproduction, Jun 11, 2021 Peer-reviewedInvitedLead authorCorresponding author
Development and Molecular Genetics of Marchantia polymorpha.

Takayuki Kohchi, Katsuyuki T Yamato, Kimitsune Ishizaki, Shohei Yamaoka, Ryuichi Nishihama

Annual review of plant biology, 72 677-702, Mar 8, 2021 Peer-reviewedInvited
Regulation of the Poly(A) Status of Mitochondrial mRNA by Poly(A)-Specific Ribonuclease Is Conserved among Land Plants.

Mai Kanazawa, Yoko Ikeda, Ryuichi Nishihama, Shohei Yamaoka, Nam-Hee Lee, Katsuyuki T Yamato, Takayuki Kohchi, Takashi Hirayama

Plant & cell physiology, 61(3) 470-480, Mar 1, 2020 Peer-reviewed
Chromatin Organization in Early Land Plants Reveals an Ancestral Association between H3K27me3, Transposons, and Constitutive Heterochromatin.

Sean A Montgomery, Yasuhiro Tanizawa, Bence Galik, Nan Wang, Tasuku Ito, Takako Mochizuki, Svetlana Akimcheva, John L Bowman, Valérie Cognat, Laurence Maréchal-Drouard, Heinz Ekker, Syuan-Fei Hong, Takayuki Kohchi, Shih-Shun Lin, Li-Yu Daisy Liu, Yasukazu Nakamura, Lia R Valeeva, Eugene V Shakirov, Dorothy E Shippen, Wei-Lun Wei, Masaru Yagura, Shohei Yamaoka, Katsuyuki T Yamato, Chang Liu, Frédéric Berger

Current biology : CB, 30(4) 573-588, Feb 24, 2020 Peer-reviewed
An Early Arising Role of the MicroRNA156/529-SPL Module in Reproductive Development Revealed by the Liverwort Marchantia polymorpha.

Tsuzuki M, Futagami K, Shimamura M, Inoue C, Kunimoto K, Oogami T, Tomita Y, Inoue K, Kohchi T, Yamaoka S, Araki T, Hamada T, Watanabe Y

Current biology : CB, Sep, 2019 Peer-reviewed
Molecular mechanism and evolution of gametogenesis in land plants

Shohei Yamaoka, Takayuki Kohchi, Takashi Araki

SEIKAGAKU, 91(4) 534-539, Aug, 2019 Peer-reviewedInvitedLead authorCorresponding author
Building new insights in plant gametogenesis from an evolutionary perspective.

Hisanaga T, Yamaoka S, Kawashima T, Higo A, Nakajima K, Araki T, Kohchi T, Berger F

Nature plants, 5(7) 663-669, Jul, 2019 Peer-reviewedLead author
A cis-acting bidirectional transcription switch controls sexual dimorphism in the liverwort.

Hisanaga T, Okahashi K, Yamaoka S, Kajiwara T, Nishihama R, Shimamura M, Yamato KT, Bowman JL, Kohchi T, Nakajima K

The EMBO journal, Jan, 2019 Peer-reviewed
Loss of CG Methylation in Marchantia polymorpha Causes Disorganization of Cell Division and Reveals Unique DNA Methylation Regulatory Mechanisms of Non-CG Methylation.

Ikeda Y, Nishihama R, Yamaoka S, Arteaga-Vazquez MA, Aguilar-Cruz A, Grimanelli D, Pogorelcnik R, Martienssen RA, Yamato KT, Kohchi T, Hirayama T, Mathieu O

Plant & cell physiology, 59(12) 2421-2431, Dec, 2018 Peer-reviewed
Generative Cell Specification Requires Transcription Factors Evolutionarily Conserved in Land Plants.

Shohei Yamaoka, Ryuichi Nishihama, Yoshihiro Yoshitake, Sakiko Ishida, Keisuke Inoue, Misaki Saito, Keitaro Okahashi, Haonan Bao, Hiroyuki Nishida, Katsushi Yamaguchi, Shuji Shigenobu, Kimitsune Ishizaki, Katsuyuki T Yamato, Takayuki Kohchi

Current biology : CB, 28(3) 479-486, Feb 5, 2018 Peer-reviewedLead author

Misc.

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陸上植物の生殖細胞分化に必要なbHLH転写因子複合体の解析

山岡尚平, 齊藤美咲, 樅木亮介, 吉竹良洋, 光田展隆, 海老根一生, 西浜竜一, 荒木崇, 河内孝之

日本農芸化学会2022年度京都大会, Mar, 2022 Lead author
ゼニゴケの配偶子器発生制御におけるMpBZR3の機能解析

古谷朋之, 山岡尚平, 石崎公庸, 西浜竜一, 荒木崇, 河内孝之, 福田裕穂, 近藤侑貴

第63回日本植物生理学会年会, Mar, 2022
ゼニゴケにおけるジベレリンに関連したメチル基転移酵素機能に影響する新規変異体選抜

下川瑛太, 川村昇吾, Rui Sun, 鈴木かおり, 吉竹良洋, 安居佑季子, 西浜竜一, 山岡尚平, 増口潔, 山口信次郎, 河内孝之

第63回日本植物生理学会年会, Mar, 2022
シロイヌナズナ花粉管は先端から核を排除した状態でも伸長制御能力を保持している

元村一基, 杉直也, 松本歩, 武内秀憲, 野田口理孝, 東山哲也, 木下哲, 山岡尚平, 竹田篤史, 丸山大輔

第63回日本植物生理学会年会, Mar, 2022
苔類ゼニゴケの成長相転換制御における日長認識機構の解析

金坂侑紀, 井上佳祐, 山岡尚平, 荒木崇

日本植物学会第85回大会, Sep, 2021
ゼニゴケ配偶子器の発生を制御する非典型BZR転写因子

古谷朋之, 山岡尚平, 石崎公庸, 西浜竜一, 荒木崇, 河内孝之, 福田裕穂, 近藤侑貴

日本植物学会第85回大会, Sep, 2021
Feedback regulation of sexual organ formation by a methyltransferase via the gibberellin-related pathway in the liverwort Marchantia polymorpha

川村昇吾, SUN Rui, 吉竹吉洋, 楠龍之介, 西浜竜一, 山岡尚平, 河内孝之

日本分子生物学会年会プログラム・要旨集(Web), 44th, 2021
Transcription of antisense long non-coding RNA SUF is important for the suppression of female differentiation in the liverwort Marchantia polymorpha

梶原智明, 宮崎基, 岩崎美雪, 山岡尚平, 吉竹良洋, 安居佑季子, 西浜竜一, 西浜竜一, 河内孝之

日本分子生物学会年会プログラム・要旨集(Web), 44th, 2021
Evolution of environment-dependent sexual reproduction mechanism in land plants.

吉竹良洋, 山岡尚平, 川村昇吾, 西浜竜一, 河内孝之

日本分子生物学会年会プログラム・要旨集(Web), 44th, 2021
The role of germ cell-specific histone H1 variants during spermiogenesis in Marchantia polymorpha

KOTANI Kanta, NISHIDA Ruri, HIGO Asuka, YAMAOKA Shohei, INOUE Keisuke, ARAKI Takashi

日本植物生理学会年会(Web), 62nd, 2021
Molecular mechanism for far-red light- and photoperiod-dependent growth phase transition in Marchantia polymorpha

KANESAKA Yuki, INOUE Keisuke, YAMAOKA Shohei, ARAKI Takashi

日本植物生理学会年会(Web), 62nd, 2021
Gibberellin-mediated feedback regulation of sexual organ formation in the liverwort Marchantia polymorpha

KAWAMURA Shogo, SUN Rui, WANG Ran, YOSHITAKE Yoshihiro, KUSUNOKI Ryunosuke, NISHIHAMA Ryuichi, YAMAOKA Shohei, KOHCHI Takayuki

日本植物生理学会年会(Web), 62nd, 2021
The roles of plant specific BZR transcription factors in Marchantia polymorpha

FURUYA Tomoyuki, YAMAOKA Shohei, ISHIZAKI Kimitsune, NISHIHAMA Ryuichi, ARAKI Takashi, KOHCHI Takayuki, FUKUDA Hiroo, KONDO Yuki

日本植物生理学会年会(Web), 62nd, 2021
Functional analysis of a R2R3-MYB transcription factor SHOTGLASS in Marchantia polymorpha

酒井友希, 高見英幸, 塚本成幸, 山岡尚平, 近藤侑貴, 深城英弘, 三村徹郎, 三村徹郎, 石崎公庸

日本植物生理学会年会(Web), 62nd, 2021
Analysis of GH17 members regulating generative cell engulfment by the vegetative cell in Arabidopsis

海老根一生, 海老根一生, 山岡尚平, 上田貴志, 上田貴志

日本植物生理学会年会(Web), 62nd, 2021
Marpolbase: development of the genome and expression database for the liverwort Marchantia polymorpha

谷澤靖洋, 川村昇吾, 矢倉勝, 望月孝子, 坂本美佳, 山岡尚平, 西浜竜一, 大和勝幸, 河内孝之, LIU Chang, BERGER Frederic, 中村保一

日本植物生理学会年会(Web), 62nd, 2021
陸上植物進化から探る環境依存的な有性生殖プログラムの起動原理

吉竹良洋, 山岡尚平, 西浜竜一, 河内孝之

日本分子生物学会年会プログラム・要旨集(Web), 43rd, 2020
アンチセンス長鎖非コードRNA SUFを介した苔類ゼニゴケの性分化制御機構の解析

梶原智明, 宮崎基, 岩崎美雪, 山岡尚平, 吉竹良洋, 安居佑季子, 西浜竜一, 河内孝之

日本分子生物学会年会プログラム・要旨集(Web), 43rd, 2020
Analysis of GH17 members regulating engulfment of the generative cell into the vegetative cell in Arabidopsis

海老根一生, 海老根一生, 山岡尚平, 上田貴志, 上田貴志

日本植物生理学会年会(Web), 61st, 2020
Regulation of growth by gibberellin-related compounds methylation in the liverwort Marchantia polymorpha

川村昇吾, SUN Rui, 山岡尚平, 鈴木かおり, 吉竹吉洋, 西浜竜一, 河内孝之

日本農芸化学会大会講演要旨集(Web), 2020, 2020

Books and Other Publications

Hartl, Daniel L.著・中村千春・岡田清孝編訳「エッセンシャル遺伝学・ゲノム科学（原著第７版）」11章発生の遺伝的制御

大澤志津江, 山岡尚平 (Role: Joint translator)

化学同人, Jan, 2021 (ISBN: 9784759820485)
SEIKAGAKU 91(6) "KOTOBA"

Shohei Yamaoka

The Japanese Biochemical Society, 2019
京都大学大学院生命科学研究科・編「京大発！フロンティア生命科学」 13章体を守るしくみ動物と植物の生体防御機構 13.2節植物の病害抵抗性の分子機構

山岡尚平 (Role: Joint author)

講談社サイエンティフィク, Mar, 2018
京都大学大学院生命科学研究科・編「京大発！フロンティア生命科学」 12章形づくりの不思議動物・植物の発生 12.2節植物の発生

山岡尚平 (Role: Joint author)

講談社サイエンティフィク, Mar, 2018
鈴木昭憲・荒井綜一編著「農芸化学の辞典」 5.1.4 植物の形態形成の分子制御

山岡尚平, 大山莞爾 (Role: Joint author)

朝倉書店, Sep, 2003

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