MISC

2002年12月

Constraints of opsin structure on the ligand-binding site: Studies with ring-fused retinals

PHOTOCHEMISTRY AND PHOTOBIOLOGY
  • T Hirano
  • ,
  • IT Lim
  • ,
  • DM Kim
  • ,
  • XG Zheng
  • ,
  • K Yoshihara
  • ,
  • Y Oyama
  • ,
  • H Imai
  • ,
  • Y Shichida
  • ,
  • M Ishiguro

76
6
開始ページ
606
終了ページ
615
記述言語
英語
掲載種別
DOI
10.1562/0031-8655(2002)076<0606:COOSOT>2.0.CO;2
出版者・発行元
AMER SOC PHOTOBIOLOGY

Ring-fused retinal analogs were designed to examine the hula-twist mode of the photoisomerization of the 9-cis retinylidene chromophore. Two 9-cis retinal analogs, the C11-C13 five-membered ring-fused and the C12-C14 five-membered ring-fused retinal derivatives, formed the pigments with opsin. The C11-C13 ring-fused analog was isomerized to a relaxed all-trans chromophore (lambda(max) &gt; 400 nm) at even -269degreesC and the Schiff base was kept protonated at 0degreesC. The C12-C14 ring-fused analog was converted photochemically to a bathorhodopsin-like chromophore (lambda(max) = 583 nm) at -196degreesC, which was further converted to the deprotonated Schiff base at 0degreesC. The model-building study suggested that the analogs do not form pigments in the retinal-binding site of rhodopsin but form pigments with opsin structures, which have larger binding space generated by the movement of transmembrane helices. The molecular dynamics simulation of the isomerization of the analog chromophores provided a twisted C11-C12 double bond for the C12-C14 ring-fused analog and all relaxed double bonds with a highly twisted C10-C11 bond for the C11-C13 ring-fused analog. The structural model of the C11-C13 ring-fused analog chromophore showed a characteristic flip of the cyclohexenyl moiety toward transmembrane segments 3 and 4. The structural models suggested that hula twist is a primary process for the photoisomerization of the analog chromophores.

リンク情報
DOI
https://doi.org/10.1562/0031-8655(2002)076<0606:COOSOT>2.0.CO;2
PubMed
https://www.ncbi.nlm.nih.gov/pubmed/12511040
Web of Science
https://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=JSTA_CEL&SrcApp=J_Gate_JST&DestLinkType=FullRecord&KeyUT=WOS:000180037400006&DestApp=WOS_CPL
URL
https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=0036981874&origin=inward
ID情報
  • DOI : 10.1562/0031-8655(2002)076<0606:COOSOT>2.0.CO;2
  • ISSN : 0031-8655
  • PubMed ID : 12511040
  • SCOPUS ID : 0036981874
  • Web of Science ID : WOS:000180037400006

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