論文

査読有り
2015年12月

K+-responsive off-to-on switching of hammerhead ribozyme through dual G-quadruplex formation requiring no heating and cooling treatment

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
  • Yudai Yamaoki
  • ,
  • Takashi Nagata
  • ,
  • Tsukasa Mashima
  • ,
  • Masato Katahira

468
1-2
開始ページ
27
終了ページ
31
記述言語
英語
掲載種別
研究論文(学術雑誌)
DOI
10.1016/j.bbrc.2015.10.173
出版者・発行元
ACADEMIC PRESS INC ELSEVIER SCIENCE

Functional RNAs that switch their activities in response to K+ may sense the intracellular (100 mM) and extracellular (5 mM) K+ concentrations and regulate their functions accordingly. Previously, we developed a quadruplex hammerhead ribozyme (QHR) whose conformational change, from a duplex to a G-quadruplex, triggered by K+ results in expression of the activity. However, this QHR required heating and cooling treatment (annealing) to induce the K+-responsive conformational change and activity. Here, we developed a new quadruplex hammerhead ribozyme (QHR) system that does not require annealing to induce the K+-responsive conformational change and activity. This system is composed of QHR and a G-quadruplex-forming complementary DNA strand (QCS). In the absence of K+, QCS formed a duplex with QHR, which suppressed the residual activity. Upon elevation of the K+ concentration, QCS dissociated from QHR was trapped in a G-quadruplex, and then QHR could form a G-quadruplex and exerted the activity. The 11.6-fold higher activity was induced by K+ with an EC50 value of 23 mM, but not by Na+, which is desirable when the activity switching between the intra-/extracellular environment is aimed at. This is the first report of the activation of functional RNA through a 'dual G-quadruplex formation system'. (C) 2015 Elsevier Inc. All rights reserved.

リンク情報
DOI
https://doi.org/10.1016/j.bbrc.2015.10.173
J-GLOBAL
https://jglobal.jst.go.jp/detail?JGLOBAL_ID=201702212566603626
Web of Science
https://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=JSTA_CEL&SrcApp=J_Gate_JST&DestLinkType=FullRecord&KeyUT=WOS:000366240800005&DestApp=WOS_CPL
ID情報
  • DOI : 10.1016/j.bbrc.2015.10.173
  • ISSN : 0006-291X
  • eISSN : 1090-2104
  • J-Global ID : 201702212566603626
  • Web of Science ID : WOS:000366240800005

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