論文

査読有り
1986年8月22日

Local and overall conformations of DNA double helices with the A·T base pairs

BBA - Gene Structure and Expression
  • Masato Katahira
  • ,
  • Yoshifumi Nishimura
  • ,
  • Masamichi Tsuboi
  • ,
  • Tomohiro Sato
  • ,
  • Yukio Mitsui
  • ,
  • Yoichi Iitaka

867
4
開始ページ
256
終了ページ
267
記述言語
英語
掲載種別
研究論文(学術雑誌)
DOI
10.1016/0167-4781(86)90042-4

Raman spectra have been observed of two different poly[d(A-T)]·poly[d(A-T)] fibers, whose X-ray diffractions were confirmed to be purely of A and B forms. A number of spectral differences were found between the A and B forms of this DNA duplex, and they were ascribed to local conformational differences in the adenosine, thymidine and phosphodiester portions. The ascription was made on the basis of a separate series of Raman examinations on six crystals involving adenosine or thymidine, and fifteen other nucleotide crystals, whose structures are all known by previous crystallographic works. By taking these structure-spectrum correlations thus obtained into account, a Raman spectroscopic investigation was made of a few double-helical DNAs in aqueous solutions. It has been concluded that both poly[d(A-T)]·poly[d(A-T)] and poly(dA)·poly(dT) have a C2′endo-anti adenosine, C2′endo-anti thymidine, a b-type mainchain (β=160±15°, γ=45±15°, δ=140±10°) and an a2-type mainchain (β=210±10°, γ=45±15°, δ=140±10°) not only in low-salt medium but also in 6.6 M CsF solutions, where β, γ and δ are the torsion angles around O5′-C5′, C5′-C4′ and C4′-C3′ axes, respectively. Poly(rA)·poly(dT), on the other hand, was considered to have a heteronomous duplex structure, in which the poly(rA) strand has a C3′endo-anti adenosine and a1-type mainchain (β=175±25°, γ=45±15°, δ=80±10°) whereas the poly(dT) strand has a C2′endo-anti thymidine and b-type mainchain. © 1986.

リンク情報
DOI
https://doi.org/10.1016/0167-4781(86)90042-4
PubMed
https://www.ncbi.nlm.nih.gov/pubmed/3741875
ID情報
  • DOI : 10.1016/0167-4781(86)90042-4
  • ISSN : 0167-4781
  • PubMed ID : 3741875
  • SCOPUS ID : 0022534267

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