業績をさがす - researchmap

De novo reconstitution of chromatin using wheat germ cell‐free protein synthesis: Yaeta Endo, Nobuaki Takemori, Szilvia K. Nagy, Kei‐ichi Okimune, Rohinton Kamakaka, Hitoshi Onouchi, Taichi E. Takasuka

FEBS Open Bio 11(6) 1552-1564 2021年6月査読有り

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Exhaustive identification of conserved upstream open reading frames with potential translational regulatory functions from animal genomes: Hiro Takahashi, Shido Miyaki, Hitoshi Onouchi, Taichiro Motomura, Nobuo Idesako, Anna Takahashi, Masataka Murase, Shuichi Fukuyoshi, Toshinori Endo, Kenji Satou, Satoshi Naito, Motoyuki Itoh

Scientific Reports 10(1) 2020年10月査読有り筆頭著者

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Comprehensive genome-wide identification of angiosperm upstream ORFs with peptide sequences conserved in various taxonomic ranges using a novel pipeline, ESUCA.: Hiro Takahashi, Noriya Hayashi, Yuta Hiragori, Shun Sasaki, Taichiro Motomura, Yui Yamashita, Satoshi Naito, Anna Takahashi, Kazuyuki Fuse, Kenji Satou, Toshinori Endo, Shoko Kojima, Hitoshi Onouchi

BMC genomics 21(1) 260-260 2020年3月30日査読有り最終著者責任著者

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Reverse genetics-based biochemical studies of the ribosomal exit tunnel constriction region in eukaryotic ribosome stalling: spatial allocation of the regulatory nascent peptide at the constriction: Seidai Takamatsu, Yubun Ohashi, Noriyuki Onoue, Yoko Tajima, Tomoya Imamichi, Shinya Yonezawa, Kyoko Morimoto, Hitoshi Onouchi, Yui Yamashita, Satoshi Naito

Nucleic Acids Research 48(4) 1985-1999 2020年2月28日査読有り

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Boron-dependent translational suppression of the borate exporter BOR1 contributes to the avoidance of boron toxicity: Izumi Aibara, Tatsuya Hirai, Koji Kasai, Junpei Takano, Hitoshi Onouchi, Satoshi Naito, Toru Fujiwara, Kyoko Miwa

Plant Physiology 177(2) 759-774 2018年6月1日査読有り

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Identification of Arabidopsis thaliana upstream open reading frames encoding peptide sequences that cause ribosomal arrest: Noriya Hayashi, Shun Sasaki, Hiro Takahashi, Yui Yamashita, Satoshi Naito, Hitoshi Onouchi

NUCLEIC ACIDS RESEARCH 45(15) 8844-8858 2017年9月査読有り最終著者責任著者

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The Minimum Open Reading Frame, AUG-Stop, Induces Boron-Dependent Ribosome Stalling and mRNA Degradation.: Mayuki Tanaka, Naoyuki Sotta, Yusuke Yamazumi, Yui Yamashita, Kyoko Miwa, Katsunori Murota, Yukako Chiba, Masami Yokota Hirai, Tetsu Akiyama, Hitoshi Onouchi, Satoshi Naito, Toru Fujiwara

The Plant cell 28(11) 2830-2849 2016年11月査読有り

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An upstream open reading frame represses expression of a tomato homologue of Arabidopsis ANAC096, a NAC domain transcription factor gene, in a peptide sequence-dependent manner: Abdul Latif Noh, Shun Watanabe, Hiro Takahashi, Satoshi Naito, Hitoshi Onouchi

PLANT BIOTECHNOLOGY 32(2) 157-U126 2015年6月査読有り最終著者責任著者

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Identification of novel Arabidopsis thaliana upstream open reading frames that control expression of the main coding sequences in a peptide sequence-dependent manner: Isao Ebina, Mariko Takemoto-Tsutsumi, Shun Watanabe, Hiroaki Koyama, Yayoi Endo, Kaori Kimata, Takuya Igarashi, Karin Murakami, Rin Kudo, Arisa Ohsumi, Abdul Latif Noh, Hiro Takahashi, Satoshi Naito, Hitoshi Onouchi

NUCLEIC ACIDS RESEARCH 43(3) 1562-1576 2015年2月査読有り最終著者責任著者

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A U-system approach for predicting metabolic behaviors and responses based on an alleged metabolic reaction network: Kansuporn Sriyudthsak, Yuji Sawada, Yukako Chiba, Yui Yamashita, Shigehiko Kanaya, Hitoshi Onouchi, Toru Fujiwara, Satoshi Naito, Ebernard O. Voit, Fumihide Shiraishi, Masami Yokota Hirai

BMC SYSTEMS BIOLOGY 8 S4 2014年12月査読有り

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The N-terminal cleavable pre-sequence encoded in the first exon of cystathionine γ-synthase contains two different functional domains for chloroplast targeting and regulation of gene expression.: Hagiwara-Komoda Y, Sugiyama T, Yamashita Y, Onouchi H, Naito S

Plant & cell physiology 55(10) 1779-1792 2014年10月査読有り

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Polyamine-responsive ribosomal arrest at the stop codon of an upstream open reading frame of the AdoMetDC1 gene triggers nonsense-mediated mRNA decay in Arabidopsis thaliana.: Naoko Uchiyama-Kadokura, Karin Murakami, Mariko Takemoto, Naoto Koyanagi, Katsunori Murota, Satoshi Naito, Hitoshi Onouchi

Plant & cell physiology 55(9) 1556-67 2014年9月査読有り最終著者責任著者

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Ribosomes in a Stacked Array: Yui Yamashita, Yoshitomo Kadokura, Naoyuki Sotta, Toru Fujiwara, Ichigaku Takigawa, Akiko Satake, Hitoshi Onouchi, Satoshi Naito

JOURNAL OF BIOLOGICAL CHEMISTRY 289(18) 12693-12704 2014年5月査読有り

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Translation elongation arrest induced by S-adenosyl-l-methionine-sensing nascent peptide in plants: Yui Yamashita, Noriyuki Onoue, Katsunori Murota, Hitoshi Onouchi, Satoshi Naito

Regulatory Nascent Polypeptides 187-201 2014年4月査読有り招待有り

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A halt in poly(A) shortening during S-adenosyl-L-methionine-induced translation arrest in CGS1 mRNA of Arabidopsis thaliarta: Yui Yamashita, Ingrid Lambein, Soko Kobayashi, Hitoshi Onouchi, Yukako Chiba, Satoshi Naito

GENES & GENETIC SYSTEMS 88(4) 241-249 2013年8月査読有り

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SS-mPMG and SS-GA: Tools for finding pathways and dynamic simulation of metabolic networks: Tetsuo Katsuragi, Naoaki Ono, Keiichi Yasumoto, Md. Altaf-Ul-Amin, Masami Y. Hirai, Kansuporn Sriyudthsak, Yuji Sawada, Yui Yamashita, Yukako Chiba, Hitoshi Onouchi, Toru Fujiwara, Satoshi Naito, Fumihide Shiraishi, Shigehiko Kanaya

Plant and Cell Physiology 54(5) 728-739 2013年5月査読有り

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Changes in mRNA stability associated with cold stress in arabidopsis cells: Yukako Chiba, Katsuhiko Mineta, Masami Y. Hirai, Yuya Suzuki, Shigehiko Kanaya, Hiro Takahashi, Hitoshi Onouchi, Junji Yamaguchi, Satoshi Naito

Plant and Cell Physiology 54(2) 181-194 2013年査読有り

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BAIUCAS: a novel BLAST-based algorithm for the identification of upstream open reading frames with conserved amino acid sequences and its application to the Arabidopsis thaliana genome: Hiro Takahashi, Anna Takahashi, Satoshi Naito, Hitoshi Onouchi

BIOINFORMATICS 28(17) 2231-2241 2012年9月査読有り最終著者責任著者

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Boron-Dependent Degradation of NIP5;1 mRNA for Acclimation to Excess Boron Conditions in Arabidopsis: Mayuki Tanaka, Junpei Takano, Yukako Chiba, Fabien Lombardo, Yuki Ogasawara, Hitoshi Onouchi, Satoshi Naito, Toru Fujiwara

PLANT CELL 23(9) 3547-3559 2011年9月査読有り

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Arabidopsis cell-free extract, ACE, a new in vitro translation system derived from Arabidopsis callus cultures.: Katsunori Murota, Yuka Hagiwara-Komoda, Keisuke Komoda, Hitoshi Onouchi, Masayuki Ishikawa, Satoshi Naito

Plant & cell physiology 52(8) 1443-53 2011年8月査読有り

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S-Adenosyl-L-methionine Induces Compaction of Nascent Peptide Chain inside the Ribosomal Exit Tunnel upon Translation Arrest in the Arabidopsis CGS1 Gene: Noriyuki Onoue, Yui Yamashita, Nobuhiro Nagao, Derek B. Goto, Hitoshi Onouchi, Satoshi Naito

JOURNAL OF BIOLOGICAL CHEMISTRY 286(17) 14903-14912 2011年4月査読有り

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Comparative metabolomics charts the impact of genotype-dependent methionine accumulation in Arabidopsis thaliana: Miyako Kusano, Atsushi Fukushima, Henning Redestig, Makoto Kobayashi, Hitomi Otsuki, Hitoshi Onouchi, Satoshi Naito, Masami Yokota Hirai, Kazuki Saito

AMINO ACIDS 39(4) 1013-1021 2010年10月査読有り

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Polar localization and degradation of Arabidopsis boron transporters through distinct trafficking pathways: Junpei Takano, Mayuki Tanaka, Atsushi Toyoda, Kyoko Miwa, Koji Kasai, Kentaro Fuji, Hitoshi Onouchi, Satoshi Naito, Toru Fujiwara

Proceedings of the National Academy of Sciences of the United States of America 107(11) 5220-5225 2010年3月16日査読有り

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Nascent peptide-mediated translation elongation arrest of Arabidopsis thaliana CGS1 mRNA occurs autonomously.: Hitoshi Onouchi, Yuhi Haraguchi, Mari Nakamoto, Daisuke Kawasaki, Yoko Nagami-Yamashita, Katsunori Murota, Azusa Kezuka-Hosomi, Yukako Chiba, Satoshi Naito

Plant & cell physiology 49(4) 549-56 2008年4月査読有り筆頭著者

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Ribosome stacking defines CGS1 mRNA degradation sites during nascent peptide-mediated translation arrest: Yuhi Haraguchi, Yoshitomo Kadokura, Mari Nakamoto, Hitoshi Onouchi, Satoshi Naito

PLANT AND CELL PHYSIOLOGY 49(3) 314-323 2008年3月査読有り

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Promoter region of the beta subunit gene of beta-conglycinin responds to methionine and glutathione in transient assays using Arabidopsis protoplasts: Naoko Ohkama-Ohtsu, Azusa Kezuka, Hitoshi Onouchi, Toru Fujiwara, Satoshi Naito

SOIL SCIENCE AND PLANT NUTRITION 54(1) 128-132 2008年2月査読有り

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止まって働くリボソーム新生ペプチドが司る植物の細胞内恒常性維持機構: 山下由衣, 尾之内均, 内藤哲

化学と生物 54(3) 191-197 2016年3月招待有り

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4-2-1 シロイヌナズナのホウ素輸送体、NIP5;1のホウ素に応答したmRNA蓄積のmRNA分解と転写の制御機構の解析（4-2 植物の微量栄養素，2016年度佐賀大会）: 田中真幸, 反田直之, 千葉由佳子, 尾之内均, 内藤哲, 藤原徹

日本土壌肥料学会講演要旨集 62 57-57 2016年

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Nascent peptide-mediated translation elongation arrest coupled with mRNA degradation in the CGS1 gene of Arabidopsis: H Onouchi, Y Nagami, Y Haraguchi, M Nakamoto, Y Nishimura, R Sakurai, N Nagao, D Kawasaki, Y Kadokura, S Naito

GENES & DEVELOPMENT 19(15) 1799-1810 2005年8月査読有り筆頭著者

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Dynamics of methionine biosynthesis: Plant Biotechnology 22(5) 379-388 2005年査読有り招待有り

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S-adenosyl-L-methionine is an effector in the posttranscriptional autoregulation of the cystathionine gamma-synthase gene in Arabidopsis: Y Chiba, R Sakurai, M Yoshino, K Ominato, M Ishikawa, H Onouchi, S Naito

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 100(18) 10225-10230 2003年9月査読有り

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Decay kinetics of autogenously regulated CGS1 mRNA that codes for cystathionine gamma-synthase in Arabidopsis thaliana: Lambein, I, Y Chiba, H Onouchi, S Naito

PLANT AND CELL PHYSIOLOGY 44(9) 893-900 2003年9月査読有り

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Identification of a short highly conserved amino acid sequence as the functional region required for Posttranscriptional autoregulation of the cystathionine gamma-synthase gene in Arabidopsis: K Ominato, H Akita, A Suzuki, F Kijima, T Yoshino, M Yoshino, Y Chiba, H Onouchi, S Naito

JOURNAL OF BIOLOGICAL CHEMISTRY 277(39) 36380-36386 2002年9月査読有り

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The ASYMMETRIC LEAVES2 gene of Arabidopsis thaliana, required for formation of a symmetric flat leaf lamina, encodes a member of a novel family of proteins characterized by cysteine repeats and a leucine zipper: H Iwakawa, Y Ueno, E Semiarti, H Onouchi, S Kojima, H Tsukaya, M Hasebe, T Soma, M Ikezaki, C Machida, Y Machida

PLANT AND CELL PHYSIOLOGY 43(5) 467-478 2002年5月査読有り

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Goto DB, Ogi M, Kijima F, Kumagai T, Werven FV, Onouchi H, Naito S. "A single-nucleotide mutation in a gene encoding S-adenosylmethionine synthetase is associated with methionine over-accumulation phenotype in Arabidopsis thaliana", Genes Genet. Syst.,・・・: 77(2) 89-95 2002年4月査読有り

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Suzuki A, Shirata Y, Ishida H, Chiba Y, Onouchi H and Naito S. :"The first exon coding region of cystathionine g-synthase gene is necessary and sufficient for downregulation of its own mRNA accumulation in transgenic Arabidopsis thaliana", Plant Cell ・・・: 42(10) 1174-1180 2001年10月査読有り

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The transposition pattern of the Ac element in tobacco cultured cells.: Semiarti, E, Onouchi, H, Torikai, S, Ishikawa, T, Machida, Y, Machida, C

Genes Genet. Syst. 76(2) 131-139 2001年査読有り

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シロイヌナズナのホウ素輸送チャンネルNIP5;1遺伝子のホウ素欠乏に応じたmRNA蓄積の制御機構: 田中真幸, 高野順平, 千葉由佳子, 尾之内均, 内藤哲, 藤原徹

日本植物生理学会年会およびシンポジウム講演要旨集 2011 540-540 2011年

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バイオインフォマティクスによる配列データベース横断解析に基づく機能上流ORFの推定: 髙橋広夫, 伊藤素行, 尾之内均

生物工学会誌 97(8) 496-499 2019年8月招待有り最終著者

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Characterization of the transposition pattern of the Ac element in Arabidopsis thaliana using endonuclease I-SceI: C Machida, H Onouchi, J Koizumi, S Hamada, E Semiarti, S Torikai, Y Machida

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 94(16) 8675-8680 1997年8月査読有り

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シロイヌナズナCGS1 mRNAの新生ペプチドによる翻訳アレストへのリボソーム出口トンネルの関与: 高松世大, 大橋悠文, 尾上典之, 山下由衣, 尾之内均, 内藤哲

日本生化学会大会・日本分子生物学会年会合同大会講演要旨集 88回・38回 [3T25-07(3P0741)] 2015年12月