基本情報

所属
国立研究開発法人農業・食品産業技術総合研究機構 次世代作物開発研究センター ゲノム育種推進室 主席研究員
学位
博士(農学)(東京農工大学)

J-GLOBAL ID
201601002211952209

染色体の発現遺伝子地図と物理地図の作成を始め、イネ品種「日本晴」全ゲノムの完全解読及び高精度参照塩基配列の構築に参加した。現在、小麦全ゲノム塩基配列解読国際ゲノムプロジェクトにも参加しながら、次世代ゲノム塩基配列解読技術を利用して、機能遺伝子を中心にしたゲノム多様性研究への取り込みやイネ、麦類やソルガム等の農作物における農業上重要遺伝子単離、機能解析及び選抜育種用DNAマーカー開発のための支援を行なっている。

論文

  114
  • Handa H, Kanamori H, Tanaka T, Murata K, Kobayashi F, Robinson SJ, Koh CS, Pozniak CJ, Sharpe AG, Paux E, International Wheat, Genome Sequencing Consortium, Wu J, Nasuda S
    The Plant journal : for cell and molecular biology 96(6) 1148 - 1159 2018年12月  査読有り
  • Fujimoto M, Sazuka T, Oda Y, Kawahigashi H, Wu J, Takanashi H, Ohnishi T, Yoneda JI, Ishimori M, Kajiya-Kanegae H, Hibara KI, Ishizuna F, Ebine K, Ueda T, Tokunaga T, Iwata H, Matsumoto T, Kasuga S, Yonemaru JI, Tsutsumi N
    Proceedings of the National Academy of Sciences of the United States of America 115(37) E8783 - E8792 2018年9月  査読有り
  • International Wheat, Genome Sequencing, Consortium (IWGSC, IWGSC RefSeq, principal investigators, Appels R, Eversole K, Feuillet C, Keller B, Rogers J, Stein N, IWGSC whole-genome assembly principal investigators, Pozniak CJ, Stein N, Choulet F, Distelfeld A, Eversole K, Poland J, Rogers J, Ronen G, Sharpe AG, Whole-genome sequencing, and assembly, Pozniak C, Ronen G, Stein N, Barad O, Baruch K, Choulet F, Keeble-Gagnère G, Mascher M, Sharpe AG, Ben-Zvi G, Josselin AA, Hi-C data-based scaffolding, Stein N, Mascher M, Himmelbach A, Whole-genome assembly quality control and analyses, Choulet F, Keeble-Gagnère G, Mascher M, Rogers J, Balfourier F, Gutierrez-Gonzalez J, Hayden M, Josselin AA, Koh C, Muehlbauer G, Pasam RK, Paux E, Pozniak CJ, Rigault P, Sharpe AG, Tibbits J, Tiwari V, Pseudomolecule assembly, Choulet F, Keeble-Gagnère G, Mascher M, Josselin AA, Rogers J, RefSeq genome structure, gene analyses, Spannagl M, Choulet F, Lang D, Gundlach H, Haberer G, Keeble-Gagnère G, Mayer KFX, Ormanbekova D, Paux E, Prade V, Šimková H, Wicker T, Automated annotation, Choulet F, Spannagl M, Swarbreck D, Rimbert H, Felder M, Guilhot N, Gundlach H, Haberer G, Kaithakottil G, Keilwagen J, Lang D, Leroy P, Lux T, Mayer KFX, Twardziok S, Venturini L, Manual gene curation, Appels R, Rimbert H, Choulet F, Juhász A, Keeble-Gagnère G, Subgenome comparative analyses, Choulet F, Spannagl M, Lang D, Abrouk M, Haberer G, Keeble-Gagnère G, Mayer KFX, Wicker T, Transposable elements, Choulet F, Wicker T, Gundlach H, Lang D, Spannagl M, Phylogenomic analyses, Lang D, Spannagl M, Appels R, Fischer I, Transcriptome analyses, RNA-seq data, Uauy C, Borrill P, Ramirez-Gonzalez RH, Appels R, Arnaud D, Chalabi S, Chalhoub B, Choulet F, Cory A, Datla R, Davey MW, Hayden M, Jacobs J, Lang D, Robinson SJ, Spannagl M, Steuernagel B, Tibbits J, Tiwari V, van Ex F, Wulff BBH, Whole-genome methylome, Pozniak CJ, Robinson SJ, Sharpe AG, Cory A, Histone mark analyses, Benhamed M, Paux E, Bendahmane A, Concia L, Latrasse D, BAC chromosome MTP, IWGSC–Bayer Whole-Genome Profiling, WGP) tags, Rogers J, Jacobs J, Alaux M, Appels R, Bartoš J, Bellec A, Berges H, Doležel J, Feuillet C, Frenkel Z, Gill B, Korol A, Letellier T, Olsen OA, Šimková H, Singh K, Valárik M, van der Vossen E, Vautrin S, Weining S, Chromosome LTC mapping, physical mapping quality control, Korol A, Frenkel Z, Fahima T, Glikson V, Raats D, Rogers J, RH mapping, Tiwari V, Gill B, Paux E, Poland J, Optical mapping, Doležel J, Číhalíková J, Šimková H, Toegelová H, Vrána J, Recombination analyses, Sourdille P, Darrier B, Gene family analyses, Appels R, Spannagl M, Lang D, Fischer I, Ormanbekova D, Prade V, CBF gene family, Barabaschi D, Cattivelli L, Dehydrin gene family, Hernandez P, Galvez S, Budak H, NLR gene family, Steuernagel B, Jones JDG, Witek K, Wulff BBH, Yu G, PPR gene family, Small I, Melonek J, Zhou R, Prolamin gene family, Juhász A, Belova T, Appels R, Olsen OA, WAK gene family, Kanyuka K, King R, Stem solidness, S, QTL team, Nilsen K, Walkowiak S, Pozniak CJ, Cuthbert R, Datla R, Knox R, Wiebe K, Xiang D, Flowering locus C (FLC) gene team, Rohde A, Golds T, Genome size analysis, Doležel J, Čížková J, Tibbits J, MicroRNA, tRNA annotation, Budak H, Akpinar BA, Biyiklioglu S, Genetic maps, mapping, Muehlbauer G, Poland J, Gao L, Gutierrez-Gonzalez J, N'Daiye A, BAC libraries, chromosome sorting, Doležel J, Šimková H, Číhalíková J, Kubaláková M, Šafář J, Vrána J, BAC pooling, BAC library repository,and access, Berges H, Bellec A, Vautrin S, IWGSC sequence, data repository and access, Alaux M, Alfama F, Adam-Blondon AF, Flores R, Guerche C, Letellier T, Loaec M, Quesneville H, Physical maps, BAC-based sequences, A BAC sequencing, and assembly, Pozniak CJ, Sharpe AG, Walkowiak S, Budak H, Condie J, Ens J, Koh C, Maclachlan R, Tan Y, Wicker T, B BAC sequencing, and assembly, Choulet F, Paux E, Alberti A, Aury JM, Balfourier F, Barbe V, Couloux A, Cruaud C, Labadie K, Mangenot S, Wincker P, D, D, a, D physical mapping, Gill B, Kaur G, Luo M, Sehgal S, AL physical mapping, Singh K, Chhuneja P, Gupta OP, Jindal S, Kaur P, Malik P, Sharma P, Yadav B, AS physical mapping, Singh NK, Khurana J, Chaudhary C, Khurana P, Kumar V, Mahato A, Mathur S, Sevanthi A, Sharma N, Tomar RS, D, BL,and, DL IWGSC–Bayer Whole-Genome Profiling (WGP, physical maps, Rogers J, Jacobs J, Alaux M, Bellec A, Berges H, Doležel J, Feuillet C, Frenkel Z, Gill B, Korol A, van der Vossen E, Vautrin S, AL physical mapping, Gill B, Kaur G, Luo M, Sehgal S, DS physical mapping, BAC sequencing, and assembly, Bartoš J, Holušová K, Plíhal O, DL BAC sequencing, a, d assembly, Clark MD, Heavens D, Kettleborough G, Wright J, A physical mapping, BAC sequencing,assembly, annotation, Valárik M, Abrouk M, Balcárková B, Holušová K, Hu Y, Luo M, BS BAC sequencing, and assembly, Salina E, Ravin N, Skryabin K, Beletsky A, Kadnikov V, Mardanov A, Nesterov M, Rakitin A, Sergeeva E, B BAC sequencing, and assembly, Handa H, Kanamori H, Katagiri S, Kobayashi F, Nasuda S, Tanaka T, Wu J, A physical mapping, BAC sequencing, Appels R, Hayden M, Keeble-Gagnère G, Rigault P, Tibbits J, B physical mapping, BAC sequencing, and assembly, Olsen OA, Belova T, Cattonaro F, Jiumeng M, Kugler K, Mayer KFX, Pfeifer M, Sandve S, Xun X, Zhan B, DS BAC sequencing, and assembly, Šimková H, Abrouk M, Batley J, Bayer PE, Edwards D, Hayashi S, Toegelová H, Tulpová Z, Visendi P, DL physical mapping, BAC sequencing, Weining S, Cui L, Du X, Feng K, Nie X, Tong W, Wang L, Figures, Borrill P, Gundlach H, Galvez S, Kaithakottil G, Lang D, Lux T, Mascher M, Ormanbekova D, Prade V, Ramirez-Gonzalez RH, Spannagl M, Stein N, Uauy C, Venturini L, Manuscript, writing team, Stein N, Appels R, Eversole K, Rogers J, Borrill P, Cattivelli L, Choulet F, Hernandez P, Kanyuka K, Lang D, Mascher M, Nilsen K, Paux E, Pozniak CJ, Ramirez-Gonzalez RH, Šimková H, Small I, Spannagl M, Swarbreck D, Uauy C
    Science (New York, N.Y.) 361(6403) 2018年8月  査読有り
  • Kuroha T, Nagai K, Gamuyao R, Wang DR, Furuta T, Nakamori M, Kitaoka T, Adachi K, Minami A, Mori Y, Mashiguchi K, Seto Y, Yamaguchi S, Kojima M, Sakakibara H, Wu J, Ebana K, Mitsuda N, Ohme-Takagi M, Yanagisawa S, Yamasaki M, Yokoyama R, Nishitani K, Mochizuki T, Tamiya G, McCouch SR, Ashikari M
    Science (New York, N.Y.) 361(6398) 181 - 186 2018年7月  査読有り
  • Itoh H, Wada KC, Sakai H, Shibasaki K, Fukuoka S, Wu J, Yonemaru JI, Yano M, Izawa T
    The Plant journal : for cell and molecular biology 94(5) 895 - 909 2018年6月  査読有り

MISC

  47

産業財産権

  8