論文

査読有り 国際誌
2019年11月

Force-field parametrization based on radial and energy distribution functions

Journal of Computational Chemistry
  • Shuntaro Chiba
  • ,
  • Yasushi Okuno
  • ,
  • Teruki Honma
  • ,
  • Mitsunori Ikeguchi

40
29
開始ページ
2577
終了ページ
2585
記述言語
英語
掲載種別
研究論文(学術雑誌)
DOI
10.1002/jcc.26035

© 2019 The Authors. Journal of Computational Chemistry published by Wiley Periodicals, Inc. We propose a novel force-field-parametrization procedure that fits the parameters of potential functions in a manner that the pair distribution function (DF) of molecules derived from candidate parameters can reproduce the given target DF. Conventionally, approaches to minimize the difference between the candidate and target DFs employ radial DFs (RDF). RDF itself has been reported to be insufficient for uniquely identifying the parameters of a molecule. To overcome the weakness, we introduce energy DF (EDF) as a target DF, which describes the distribution of the pairwise energy of molecules. We found that the EDF responds more sensitively to a small perturbation in the pairwise potential parameters and provides better fitting accuracy compared to that of RDF. These findings provide valuable insights into a wide range of coarse graining methods, which determine parameters using information obtained from a higher-level calculation than that of the developed force field. © 2019 The Authors. Journal of Computational Chemistry published by Wiley Periodicals, Inc.

リンク情報
DOI
https://doi.org/10.1002/jcc.26035
PubMed
https://www.ncbi.nlm.nih.gov/pubmed/31343749
PubMed Central
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6790663
URL
https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=85072791962&origin=inward
ID情報
  • DOI : 10.1002/jcc.26035
  • ISSN : 0192-8651
  • PubMed ID : 31343749
  • PubMed Central 記事ID : PMC6790663
  • SCOPUS ID : 85072791962

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