Hiroyuki Ogata

J-GLOBAL         Last updated: Oct 21, 2019 at 14:16
 
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Name
Hiroyuki Ogata
Nickname
hiroyuki.ogata
E-mail
ogatakuicr.kyoto-u.ac.jp
Affiliation
Kyoto University
Section
Institute for Chemical Research
Research funding number
70291432
ORCID ID
0000-0001-6594-377X

Published Papers

 
Genome-resolved viral and cellular metagenomes revealed potential key virus-host interactions in a deep freshwater lake.
Okazaki Y., Nishimura Y., Yoshida T., Ogata H., Nakano S.
Environ. Microbiol.   doi: 10.(1111) 1462-2920.14816   Oct 2019   [Refereed]
The earth is small for “leviathans”: long distance dispersal of giant viruses across aquatic environments.
Li Y., Endo H., Gotoh Y., Watai H., Ogawa N., Blanc-Mathieu R., Yoshida T., Ogata H.
Microbes Environ.   34(3) 334-339   Sep 2019   [Refereed]
Fifteen marseilleviruses newly isolated from three water samples in Japan reveal a local diversity of Marseilleviridae.
Aoki K., Hagiwara R., Akashi M., Murata K., Ogata H., Takemura M.
Front. Microbiol.   24(10) 1152   May 2019   [Refereed]
Marine DNA Viral Macro- and Microdiversity from Pole to Pole.
Gregory A.C., Zayed A.A., Conceicao-Neto N., Temperton B., Bolduc B., Alberti A., Ardyna M., Arkhipova K., Carmichael M., Cruaud C., Dimier C., Dominguez-Huerta G., Ferland J., Kandels S., Liu Y., Marec C., Pesant S., Picheral M., Pisarev S., Poulain J., Tremblay J.E., Vik D.; Tara Oceans Coordinators, Babin M., Bowler C., Culley A.I., de Vargas C., Dutilh B.E., Iudicone D., Karp-Boss L., Roux S., Sunagawa S., Wincker P., Sullivan M.B.
Cell.   16;177(5) 1109-1123   May 2019   [Refereed]
Assessing the viral content of uncultured picoeukaryotes in the global-ocean by single cell genomics
Castillo Y.M., Mangot J.-F., Benites F., Logares R., Kuronishi M., Ogata H., Jaillon O., Massana R., Sebastián M., Vaqué D.
Cell.   177 1109-1123   May 2019   [Refereed]
Medusavirus, a novel large DNA virus discovered from hot spring water.
Yoshikawa G., Blanc-Mathieu R., Song C., Kayama Y., Mochizuki T., Murata K., Ogata H., Takemura M.
J. Virol., 93   e02130-18   Apr 2019   [Refereed]
Community‐Level Responses to Iron Availability in Open Ocean Plankton Ecosystems
Caputi L., Carradec Q., Eveillard D., Kirilovsky A., Pelletier, Pierella Karlusich J.J., Vieira F.R.J., Villar E., Chaffron S., Malviya S., Scalco E., Acinas S.G., Alberti A., Aury J.-M., Benoiston A.-S., Bertrand A., Biard T., Bittner L., Boccara M., Brum J.R., Brunet C., Busseni G., Carratala A., Claustre H., Coelho L.P., Colin S., D’Aniello S., Da Silva C., Del Core M., Dore H., Gasparini S., Kokoszka F., Jamet J.-L., Lejeusne C., Lepoivre C., Lescot M., Lima-Mendez G., Lombard F., Lukes J., Maillet N., Madoui M.-A., Martinez E., Mazzocchi M.G., Neou M.B., Paz-Yepes J., Poulain J., Ramondenc S., Romagnan J.-B., Roux S., Manta D.S., Sanges R., Speich S., Sprovieri M., Sunagawa S., Taillander V., Tanaka A., Tirichine L., Trottier C., Uitz J., Veluchamy A., Vesela J., Vincent F., Yau S., Kandels-Lewis S., Searson S., Dimier C., Picheral M., Tara Oceans Coordinators, Bork P., Boss E., de Vargas C., Follows M.J., Grimsley N., Guidi L., Hingamp P., Karsenti E., Sordino P., Stemmann L., Sullivan M.B., Tagliabue A., Zingone A., Garczarek L., d’Ortenzio F., Testor P., Not F., Ribera d’Alcala M., Wincker P., Bowler C., Iudicone D.
Global Biogeochem. Cycles   33(33)    Jan 2019   [Refereed]
Structural and phylogenetic diversity of anaerobic carbon-monoxide dehydrogenases.
Inoue M., Nakamoto I., Omae K., Oguro T., Ogata H., Yoshida T., Sako Y.
Front. Microbiol.   9 3353   Jan 2019   [Refereed]
Minimum Information about Uncultivated Virus Genomes (MIUViG): a community consensus on standards and best practices for describing genome sequences from uncultivated viruses.
Roux S., Adriaenssens E.M., Dutilh B.E., Koonin E.V., Kropinski A.M., Krupovic M., Kuhn J.H., Lavigne R., Brister J.R., Varsani A., Amid C., Aziz R.K., Bordenstein S.R., Bork P., Breitbart M., Cochrane G.R., Daly R.A., Desnues C., Duhaime M.B., Emerson J.B., Enault F., Fuhrman J.A., Hingamp P., Hugenholtz P., Hurwitz B.L., Ivanova N.N., Labonte J.M., Lee K.-B., Malmstrom R.R., Martinez-Garcia M., Mizrachi I., Ogata H., Paez-Espino D., Petit M.-A., Putonti C., Rattei T., Reyes A., Rodriguez-Valera F., Rosario K., Schriml L., Schulz F., Steward G.F., Sullivan M.B., Sunagawa S., Suttle C.A., Temperton B., Tringe S.G., Vega Thurber R., Webster N.S., Whiteson K.L., Wilhelm S.W., Wommack K.E., Woyke T., Wrighton K., Yilmaz P., Yoshida T., Young M.J., Yutin N., Allen L.Z., Kyrpides N.C., and Eloe-Fadrosh E.A.
Nat. Biotechnol.   37 29-37   Jan 2019   [Refereed]
Community-level responses to iron availability in open ocean planktonic ecosystems.
Caputi L., Carradec Q., Eveillard D., Kirilovsky A., Pelletier, Pierella Karlusich J.J., Vieira F.R.J., Villar E., Chaffron S., Malviya S., Scalco E., Acinas S.G., Alberti A., Aury J.-M., Benoiston A.-S., Bertrand A., Biard T., Bittner L., Boccara M., Brum J.R., Brunet C., Busseni G., Carratala A., Claustre H., Coelho L.P., Colin S., D’Aniello S., Da Silva C., Del Core M., Dore H., Gasparini S., Kokoszka F., Jamet J.-L., Lejeusne C., Lepoivre C., Lescot M., Lima-Mendez G., Lombard F., Lukes J., Maillet N., Madoui M.-A., Martinez E., Mazzocchi M.G., Neou M.B., Paz-Yepes J., Poulain J., Ramondenc S., Romagnan J.-B., Roux S., Manta D.S., Sanges R., Speich S., Sprovieri M., Sunagawa S., Taillander V., Tanaka A., Tirichine L., Trottier C., Uitz J., Veluchamy A., Vesela J., Vincent F., Yau S., Kandels-Lewis S., Searson S., Dimier C., Picheral M., Tara Oceans Coordinators, Bork P., Boss E., de Vargas C., Follows M.J., Grimsley N., Guidi L., Hingamp P., Karsenti E., Sordino P., Stemmann L., Sullivan M.B., Tagliabue A., Zingone A., Garczarek L., d’Ortenzio F., Testor P., Not F., Ribera d’Alcala M., Wincker P., Bowler C., Iudicone D.
Global Biogeochem. Cycles   33 391-419   Jan 2019   [Refereed]
Global trends in marine plankton diversity across kingdoms of life.
Ibarbalz F.M., Henry N., Brandão M.C., Martini S., Busseni G., Byrne H., Coelho L.P., Endo H., Gasol J.M., Gregory A.C, Mahé F., Rigonato J., Royo-Llonch M., Salazar G., Sanz-Sáez I, Scalco E., Soviadan D., Zayed A.A., Zingone A., Labadie K., Ferland J., Marec C., Kandels S., Picheral M., Dimier C., Poulain J., Pisarev S., Carmichael M., Pesant S., Tara Oceans Coordinators, Babin M., Boss E., Iudicone D., Jaillon O., Acinas S.G., Ogata H., Pelletier E., Stemmann L., Sullivan M.B., Sunagawa S., Bopp L., de Vargas C., Karp-Boss L., Wincker P., Lombard F., Bowler C., Zinger L.
Cell.      2019   [Refereed]
Gene expression changes and community turnover differentially shape the global ocean metatranscriptome.
Salazar G., Paoli L., Alberti A., Huerta-Cepas J., Ruscheweyh H.-J., Cuenca M., Field C.M., Coelho L.P., Cruaud C., Engelen S., Gregory A.C., Labadie K., Marec C., Pelletier E., Royo-Llonch M., Roux S., Sánchez P., Uehara H., Zayed A.A., Zeller G., Carmichae M., Dimier C., Ferland J., Kandels S., Picheral M., Pisarev S., Poulain J., Tara Oceans Coordinators, Acinas S.G., Babin M., Bork P., Bowler C., de Vargas C., Guidi L., Hingamp P., Iudicone D., Karp-Boss L., Karsenti E., Ogata H., Pesant S., Speich S., Sullivan M.B., Wincker P., Sunagawa S.
Cell.      2019   [Refereed]
Diatom diversity through HTS-metabarcoding in coastal European seas.
Piredda R., Claverie J.-M., Decelle J., de Vargas C., Dunthorn M., Edvardsen B., Eikrem W., Forster D., Kooistra W.H.C.F., Logares R., Massana R., Montresor M., Not F., Ogata H., Pawlowski J., Romac S., Sarno D., Stoeck T., Zingone A.
Sci. Rep.   8, 18059    Dec 2018   [Refereed]
Degenerate PCR primers to reveal the diversity of giant viruses in coastal waters.
Li Y., Hingamp P., Watai H., Endo H., Yoshida T., Ogata H.
Viruses   10 E496   Sep 2018   [Refereed]
Minimum Information about Uncultivated Virus Genomes (MIUViG): a community consensus on standards and best practices for describing genome sequences from uncultivated viruses.
Roux S., Adriaenssens E.M., Dutilh B.E., Koonin E.V., Kropinski A.M., Krupovic M., Kuhn J.H., Lavigne R., Brister J.R., Varsani A., Amid C., Aziz R.K., Bordenstein S.R., Bork P., Breitbart M., Cochrane G.R., Daly R.A., Desnues C., Duhaime M.B., Emerson J.B., Enault F., Fuhrman J.A., Hingamp P., Hugenholtz P., Hurwitz B.L., Ivanova N.N., Labonte J.M., Lee K.-B., Malmstrom R.R., Martinez-Garcia M., Mizrachi I., Ogata H., Paez-Espino D., Petit M.-A., Putonti C., Rattei T., Reyes A., Rodriguez-Valera F., Rosario K., Schriml L., Schulz F., Steward G.F., Sullivan M.B., Sunagawa S., Suttle C.A., Temperton B., Tringe S.G., Vega Thurber R., Webster N.S., Whiteson K.L., Wilhelm S.W., Wommack K.E., Woyke T., Wrighton K., Yilmaz P., Yoshida T., Young M.J., Yutin N., Allen L.Z., Kyrpides N.C., Eloe-Fadrosh E.A.
Nat. Biotechnol.      2018   [Refereed]
Contrasting biogeography and diversity patterns between diatoms and haptophytes in the central Pacific Ocean.
Endo H., Ogata H., Suzuki K.
Sci. Rep.      2018   [Refereed]
MAPLE 2.3.0: an improved system for evaluating the functionomes of genomes and metagenomes.
Arai W., Taniguchi T., Goto S., Moriya Y., Uehara H., Takemoto K., Ogata H., Takami H.
Biosci. Biotechnol. Biochem.   doi:10. 1080/09168451.2018.1476122   May 2018   [Refereed]
Taxon richness of "Megaviridae" exceeds those of Bacteria and Archaea in the ocean.
Mihara T., Koyano H., Hingamp P., Grimsley N., Goto S., Ogata H.
Microbes Environ.   doi:10. 1264/jsme2.ME17203   2018   [Refereed]
Xanthomonas citri jumbo phage XacN1 exhibits a wide host range and high complement of tRNA genes.
Yoshikawa G., Askora A., Blanc-Mathieu R., Kawasaki T., Li Y., Nakano M., Ogata H., Yamada T.
Sci. Rep.   8, 4486, doi:10.1038/s41598-018-22239-3   2018   [Refereed]
Locality and diel cycling of viral production revealed by a 24 h time course cross-omics analysis in a coastal region of Japan.
Yoshida T., Nishimura Y., Watai H., Haruki N., Morimoto D., Kaneko H., Honda T., Yamamoto K., Hingamp P., Sako Y., Goto S., Ogata H.
ISME J.   doi:10. 1038/s41396-018-0052-x   2018   [Refereed]
Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans.
Seeleuthner Y., Mondy S., Lombard V., Carradec Q., Pelletier E., Wessner M., Leconte J., Mangot J.F., Poulain J., Labadie K., Logares R., Sunagawa S., de Berardinis V., Salanoubat M., Dimier C., Kandels-Lewis S., Picheral M., Searson S., Tara Oceans Coordinators, Pesant S., Poulton N., Stepanauskas R., Bork P., Bowler C., Hingamp P., Sullivan M.B., Iudicone D., Massana R., Aury J.M., Henrissat B., Karsenti E., Jaillon O., Sieracki M., de Vargas C., Wincker P.
Nat.Commun.   9,310, doi:10. 1038/s41467-017-02235-3   2018   [Refereed]
A global ocean atlas of eukaryotic genes.
Carradec Q., Pelletier E., Da Silva C., Alberti A., Seeleuthner Y., Blanc-Mathieu R., Lima-Mendez G., Rocha F., Tirichine L., Labadie K., Kirilovsky A., Bertrand A., Engelen S., Madoui M.-A., Meheust R., Poulain J., Romac S., Richter D., Yoshikawa G., Dimier C., Kandels-Lewis S., Picheral M., Searson S., Tara Oceans Coordinators, Jaillon O., Aury J.-M., Karsenti E., Sullivan M.B., Sunagawa S., Bork P., Not F., Hingamp P., Raes J., Guidi L., Ogata H., de Vargas C., Iudicone D., Bowler C., Wincker P.
Nat. Commun.   9,373, doi:10. 1038/s41467-017-02342-1   2018   [Refereed]
Habitat Alterations by Viruses: Strategies by Tupanviruses and Others.
Hiroyuki Ogata
Microbes Environ   33 117-119   2018   [Invited]
Nishiyama H., Nagai T., Kudo M., Okazaki Y., Azuma Y., Watanabe T., Susumu G., Ogata H., Sakurai T.
Biochem.Biophys.Res.Commun.   495(1) 273-279   2018   [Refereed]
Type III polyketide synthases: functional classification and phylogenomics
Shimizu Y., Ogata H., Goto S.
ChemBioChem   18 50-65   2017   [Refereed]
Matsui T., Yoshikawa G.,, Mihara T., Chatchawankanphanich O., Kawasaki T., Nakano M., Fujie M., Ogata H., Yamada T.
Front. Microbiol.   8 1010   2017   [Refereed]
Nishimura Y., Yoshida T., Kuronishi M., Uehara H., Ogata H., Goto S.
Bioinformatics      Mar 2017   [Refereed]
Shimizu Y., Ogata H., Goto S.
Bioinformatics      Mar 2017   [Refereed]
Environmental viral genomes shed new light on virus-host interactions in the ocean
Nishimura Y., Watai H., Honda T., Mihara T., Omae K., Roux S., Blanc-Mathieu R., Yamamoto K., Hingamp P., Sako Y., Sullivan M.B., Goto S., Ogata H., Yoshida T.
mSphere   2 e00359-16   2017   [Refereed]
Blanc-Mathieu R., Ogata H.
Curr. Opin. Microbiol.   31 94-100   2016   [Refereed][Invited]
Mihara T., Nasr-Eldin M.A., Chatchawankanphanich O., Bhunchoth A., Phironrit N., Kawasaki T., Nakano M., Fujie M., Ogata H., Yamada T.
Virol. Rep.   6 61-73   2016   [Refereed]
Roux S., Brum J.R., Dutilh B.E., Sunagawa S., Duhaime M.B., Loy A., Poulos B.T., Solonenko N., Lara E., Poulain J., Pesant S., Kandels-Lewis S., Dimier C., Picheral M., Searson S., Cruaud C., Alberti A., Duarte C.M., Gasol J.M., Vaque D.; Tara Oceans Coordinators, Bork P., Acinas S.G., Wincker P., Sullivan M.B.
Nature   537 689-693   2016   [Refereed]
Forster D., Dunthorn M., Mahe F., Dolan J.R., Audic S., Bass D., Bittner L., Boutte C., Christen R., Claverie J.-M., Decelle J., Edvardsen B., Egge E., Eikrem W., Gobet A., Kooistra W.H.C.F., Logares R., Massana R., Montresor M., Not F., Ogata H., Pawlowski J., Pernice M.C., Romac S., Shalchian-Tabrizi K., Simon N., Richards T.A., Santini S., Sarno D., Siano R., Vaulot D., Wincker P., Zingone A., de Vargas C., Stoeck T.
FEMS Microbiol. Ecol.   92    2016   [Refereed]
Bhunchoth A., Blanc-Mathieu R., Mihara T., Nishimura Y, Askora A., Phironrit N., Leksomboon C., Chatchawankanphanich O., Kawasaki T., Nakano M., Fujie M., Ogata H., Yamada Y.
Virology   494 56-66   2016   [Refereed]
Mihara T., Nishimura Y., Shimizu Y., Nishiyama H., Yoshikawa G., Uehara H., Hingamp P., Goto S, Ogata H.
Viruses   8 66   2016   [Refereed]
Guidi L., Chaffron S., Bittner L., Eveillard D., Larhlimi A., Roux S., Darzi Y., Audic S., Berline L., Brum J., Coelho L.P., Espinoza J.C., Malviya S., Sunagawa S., Dimier C., Kandels-Lewis S., Picheral M., Poulain J., Searson S.; Tara Oceans Consortium Coordinators, Stemmann L., Not F., Hingamp P., Speich S., Follows M., Karp-Boss L., Boss E., Ogata H., Pesant S., Weissenbach J., Wincker P., Acinas S.G., Bork P., de Vargas C., Iudicone D., Sullivan M.B., Raes J., Karsenti E., Bowler C., Gorsky G.
Nature   532 465-470   2016   [Refereed]
Lescot M., Hingamp P., Kojima K.K., Villar E., Romac S., Veluchamy A., Boccara M., Jaillon O., Iudicone D., Bowler C., Wincker P., Claverie J.-M., Ogata H.
ISME J.   10 1134-1146   2016   [Refereed]
【特集にあたって】知られざるウイルスの世界をあばく
武村政春, 緒方博之
生物の科学 遺伝   69 264-267   2015
海洋巨大ウイルス―ゲノムから見えたきた多様性と生態
三原知子, 五斗進, 緒方博之
生物の科学 遺伝   69 318-325   2015
Ben Halima N., Khemakhem B., Fendri I., Ogata H., Baril P., Pichon C., Abdelkafi S.
Biochim. Biophys. Acta   1864 52-61   2015   [Refereed]
The 474-kilobase-pair complete genome sequence of CeV-01B, a virus infecting Haptolina (Chrysochromulina) ericina (Prymnesiophyceae)
Gallot-Lavallee L., Pagarete A., Legendre M., Santini S., Sandaa R.-A., Himmelbauer H., Ogata H., Bratbak G., Claverie J.-M.
Genome Announc.   3 e01413-e01415   2015   [Refereed]
Massana R., Gobet A., Audic S., Bass D., Bittner L., Boutte C., Chambouvet A., Christen R., Claverie J.-M., Decelle J., Dolan J.R., Dunthorn M., Edvardsen B., Forn I., Forster D., Guillou L., Jaillon O., Kooistra W.H., Logares R., Mahe F., Not F., Ogata H., Pawlowski J., Pernice M.C., Probert I., Romac S., Richards T., Santini S., Shalchian-Tabrizi K., Siano R., Simon N., Stoeck T., Vaulot D., Zingone A., de Vargas C.
Environ. Microbiol.   17 4035-4049   2015   [Refereed]
Clerissi C., Desdevises Y., Romac S., Audic S., de Vargas C., Acinas S.G., Casotti R., Poulain J., Wincker P., Hingamp P., Ogata H., Grimsley N.
Environ. Microbiol. Rep.   7 979-989   2015   [Refereed]
巨大ウイルスがもたらしたパンドラの箱
緒方博之, 武村政春
生物の科学 遺伝   68 194-199   2014
von Dassow P, John U, Ogata H, Probert I, Bendif EM, Kegel JU, Audic S, Wincker P, Da Silva C, Claverie JM, Doney S, Glover DM, Flores DM, Herrera Y, Lescot M, Garet-Delmas MJ, de Vargas C.
ISME J   9 1365-1377   Jun 2015   [Refereed]
Pesant S, Not F, Picheral M, Kandels-Lewis S, Le Bescot N, Gorsky G, Iudicone D, Karsenti E, Speich S, Trouble R, Dimier C, Searson S.
Sci Data   2 150023-150023   May 2015   [Refereed]
Lima-Mendez G, Faust K, Henry N, Decelle J, Colin S, Carcillo F, Chaffron S, Ignacio-Espinosa JC, Roux S, Vincent F, Bittner L, Darzi Y, Wang J, Audic S, Berline L, Bontempi G, Cabello AM, Coppola L, Cornejo-Castillo FM, d'Ovidio F, De Meester L, Ferrera I, Garet-Delmas MJ, Guidi L, Lara E, Pesant S, Royo-Llonch M, Salazar G, Sanchez P, Sebastian M, Souffreau C, Dimier C, Picheral M, Searson S, Kandels-Lewis S, Gorsky G, Not F, Ogata H, Speich S, Stemmann L, Weissenbach J, Wincker P, Acinas SG, Sunagawa S, Bork P, Sullivan MB, Karsenti E, Bowler C, de Vargas C, Raes J.
Science   348 1262073-1262073   May 2015   [Refereed]
de Vargas C, Audic S, Henry N, Decelle J, Mahe F, Logares R, Lara E, Berney C, Le Bescot N, Probert I, Carmichael M, Poulain J, Romac S, Colin S, Aury JM, Bittner L, Chaffron S, Dunthorn M, Engelen S, Flegontova O, Guidi L, Horak A, Jaillon O, Lima-Mendez G, Lukes J, Malviya S, Morard R, Mulot M, Scalco E, Siano R, Vincent F, Zingone A, Dimier C, Picheral M, Searson S, Kandels-Lewis S, Acinas SG, Bork P, Bowler C, Gorsky G, Grimsley N, Hingamp P, Iudicone D, Not F, Ogata H, Pesant S, Raes J, Sieracki ME, Speich S, Stemmann L, Sunagawa S, Weissenbach J, Wincker P, Karsenti E.
Science   348 1261605-1261605   May 2015   [Refereed]
Brum JR, Ignacio-Espinoza JC, Roux S, Doulcier G, Acinas SG, Alberti A, Chaffron S, Cruaud C, de Vargas C, Gasol JM, Gorsky G, Gregory AC, Guidi L, Hingamp P, Iudicone D, Not F, Ogata H, Pesant S, Poulos BT, Schwenck SM, Speich S, Dimier C, Kandels-Lewis S, Picheral M, Searson S, Bork P, Bowler C, Sunagawa S, Wincker P, Karsenti E, Sullivan MB.
Science   348 1261498-1261498   May 2015   [Refereed]
Villar E, Farrant GK, Follows M, Garczarek L, Speich S, Audic S, Bittner L, Blanke B, Brum JR, Brunet C, Casotti R, Chase A, Dolan JR, d'Ortenzio F, Gattuso JP, Grima N, Guidi L, Hill CN, Jahn O, Jamet JL, Le Goff H, Lepoivre C, Malviya S, Pelletier E, Romagnan JB, Roux S, Santini S, Scalco E, Schwenck SM, Tanaka A, Testor P, Vannier T, Vincent F, Zingone A, Dimier C, Picheral M, Searson S, Kandels-Lewis S, Acinas SG, Bork P, Boss E, de Vargas C, Gorsky G, Ogata H, Pesant S, Sullivan MB, Sunagawa S, Wincker P, Karsenti E, Bowler C, Not F, Hingamp P, Iudicone D.
Science   348 1261447-1261447   May 2015   [Refereed]

Conference Activities & Talks

 
Eukaryotic giant viruses: update on their evolution, diversity and ecology.
Hiroyuki Ogata
ELSI Thermophiles seminar   30 Aug 2019   
Prediction of viruses enhancing the biological carbon pump.
Hiroyuki Ogata
Neo-Virology Informatics Workshop   29 Aug 2019   
Do viruses enhance the carbon export down to the deep ocean?
Hiroyuki Ogata
Gordon Research Conference   15 Jul 2019   
地球規模海洋オミクスデータに基づく巨大ウイルスと生物炭素ポンプの関係の解明 [Invited]
Hiroyuki Ogata
第2回感染症診断と治療におけるゲノム解析   15 Mar 2019   
A giant virus from a freshwater environment with a full set of histone genes
Hiroyuki Ogata
9th Aquatic Virus Workshop   17 Jun 2018   
Diversity and biogeography of marine giruses and their association with the biological carbon pump
Hiroyuki Ogata
The 3rd Ringberg Symposium on Giant Virus Biology   21 Nov 2017   
Multi-omics approach to assess viral impact on marine plankton [Invited]
Hiroyuki Ogata
KAUST Global Ocean Genome Workshop   Oct 2017   
マルチオミクス解析が明らかにする洋ウイルスの多様性と存在意義 [Invited]
Hiroyuki Ogata
Aug 2017   
Towards unveiling pivotal roles of viruses in marine ecosystems [Invited]
Hiroyuki Ogata
The 73rd Fujihara Seminar, International Conference "Molecular Life of Diatoms"   13 Jul 2017   
Biodiversity of marine plankton revealed by Tara Oceans' eco-systems approach [Invited]
Hiroyuki Ogata
Tara Coral Conference   Apr 2017   
遺伝子科学の昨今、生物学からのアプローチ [Invited]
Hiroyuki Ogata
2016年度日仏会館科学シンポジウム   3 Dec 2016   
Extreme diversity, high abundance and activities of giant viruses in the sea.
Hiroyuki Ogata
The 39th Annual Meeting of the Molecular Biology Society of Japan   2 Dec 2016   
アメーバウイルス研究がもたらしたンパクト
緒方博之
日本微生物生態学会年会   24 Oct 2016   
環境ウイルスゲノムの自動分類法
西村陽介, 吉田天士, 緒方博之, 五斗進
ファージ・環境ウイルス研究会合同シンポジウム   22 Oct 2016   
versity of the Bacteroidetes viruses through analysis of 48 new genera
博康, 西村陽介, 五斗進, 緒方博之, 左子芳彦, 吉田天士
ファージ・環境ウイルス研究会合同シンポジウム   22 Oct 2016   
Pan-ocean meta-transcriptomic analysis of nucleo-cytoplasmic large DNA viruses
Blanc-Mathieu R., Yoshikawa G., Ogata H.
ファージ・環境ウイルス研究会合同シンポジウム   21 Oct 2016   
多数のtRNAをコードする大型ファージXacN1のゲノム解析
吉川元貴, Blanc-Mathieu R., 緒方博之, 山田隆
ファージ・環境ウイルス研究会合同シンポジウム   21 Oct 2016   
Biodiversity and Chemical Biology of Marine and Terrestrial Life in the Philippine Region [Invited]
Hiroyuki Ogata
Biodiversity and Chemical Biology of Marine and Terrestrial Life in the Philippine Region   17 Oct 2016   
A preliminary characterization of the genome of XacN1, a giant phage infecting the citrus canker agent Xanthomonas citri
Yoshikawa G., Blanc-Mathieu R., Ogata H., Yamada T.
Informatics in Biology, Medicine and Pharmacology 2016   29 Sep 2016   
Investigation of Mouse Gut Microbiota Affected by Elental and Lipacreon
Nishiyama H., Goto S., Nagai T., Okazaki Y., Sakurai T., Ogata H.
Informatics in Biology, Medicine and Pharmacology 2016   29 Sep 2016   
Ancient DNA repair genes from the virus world
Blanc-Mathieu R., Ogata H.
Extremophiles 2016   13 Sep 2016   
ウイルスは生命か?-巨大ウイルスを中心に- [Invited]
Hiroyuki Ogata
第56回生物物理若手の会夏の学校   4 Sep 2016   
Global meta-transcriptomic analysis of nucleo-cytoplasmic large DNA viruses in the sea
Yoshikawa G., Blanc-Mathieu R., Ogata H.
16th Annual International Workshop on Bioinformatics and Systems Biology   10 Aug 2016   
海洋巨大ウイルスの多様性と宿主予測 [Invited]
Hiroyuki Ogata
水圏微生物研究フォーラム   9 Aug 2016   
完全ゲノムから定量化した海洋ウイルスの多様性とその宿主予測
西村陽介, 綿井博康, 本田貴史, 三原知子, 大前公保, Blanc-Mathieu R., 山本圭吾, 左子芳彦, 五斗進, 緒方博之, 吉田天士
水圏微生物研究フォーラム   9 Aug 2016   
Seasonal dynamics of marine viral communities in Japanese coastal area revealed by genomic OTUs analysis
綿井博康, 西村陽介, 山本圭吾, 五斗進, 緒方博之, 左子芳彦, 吉田 天士
水圏微生物研究フォーラム   9 Aug 2016   
The effect of Lipacreon and Elental on mouse gut microbiota
Nishiyama H., Goto S., Nagai T., Okazaki Y., Sakurai T., Ogata H.
16th Annual International Workshop on Bioinformatics and Systems Biology   9 Aug 2016   
Virus-host database: a manually curated resource for viral host prediction
Hiroyuki OgataMihara T., Nishimura Y., Nishiyama H., Goto S., Ogata H.
8th Aquatic Virus Workshop   13 Jul 2016   
海洋ウイルス:環境ゲノムから見る多様性・相互作用・分布. [Invited]
Hiroyuki Ogata
日本海洋学会2016年度春季大会   17 Mar 2016   
完全長ゲノムに基づく海洋ウイルスの定量的動態解析とその宿主微生物の推定.
綿井博康, 本田貴史, 山本圭吾, 西村陽介, 五斗進, 緒方博之, 左子芳彦, 吉田天士
日本海洋学会2016年度春季大会   12 Mar 2016   
GenomeNet's services for metagenomics studies
Ogata H., Mihara T., Nishimura Y., Blanc-Mathieu R., Goto S.
A New Age of Discovery for Aquatic Microeukaryotes   27 Jan 2016   
巨大ウイルスは海洋生態系進化の原動力である
緒方博之
第37回日本分子生物学会年会(2014/11/25-27)   25 Nov 2015   Yokohama
Assessing the diversity of the Megaviridae giant viruses based on RNA polymerase beta genes
Mihara T., Koyano H., Hingamp P., Goto S., Ogata H.
Informatics in Biology, Medicine and Pharmacology 2015   30 Oct 2015   
Relating the reaction types and phylogeny of type III polyketide synthases
Shimizu Y., Ogata H., Goto S.
Informatics in Biology, Medicine and Pharmacology 2015   29 Oct 2015   
Revealing complete genomes from metagenomes: a case study for viruses in the ocean
Nishimura Y., Watai W., Honda T., Omae K., Mihara T., Hingamp P., Yamamoto K., Sako Y., Yoshida T., Goto S., Ogata H.
Informatics in Biology, Medicine and Pharmacology 2015   29 Oct 2015   
A GenomeNet resource for virus-host interaction network analyses
Mihara T., Nishimura Y., Uehara H., Hingamp P., Goto S., Ogata H.
Annual meeting of Japanese Society of Microbial Ecology, 2015   18 Oct 2015   
A viral proteomic tree server and its application to a marine metagenomic study
Nishimura Y., Mihara T., Yoshida T., Hingamp P., Ogata H., Goto S.
Annual meeting of Japanese Society of Microbial Ecology, 2015   18 Oct 2015   
Metagenomic analysis of viral communities in Osaka bay, Japan
Hiroyuki OgataWatai H., Nishimura Y., Mihara T., Honda T, Yamamoto K, Hingamp P., Goto S., Ogata H., Sako Y, Yoshida T.
Annual meeting of Japanese Society of Microbial Ecology, 2015   18 Oct 2015   
Diversity of marine giant DNA viruses
Mihara T., Koyano H., Goto S., Ogata H.
International Workshop on Bioinformatics and Systems Biology 2015   20 Jul 2015   
海洋巨大ウイルスの多様性と進化. [Invited]
緒方博之
JT生命誌研究館セミナー   18 Jun 2015   Tkatsuki
メタオミクスによる海洋ウイルスと微生物群集の継時的観測
西村陽介, 綿井博康, 本田貴史, 三原知子, 山本圭吾, 左子芳彦, 吉田天士, 五斗進, 緒方博之
NGS現場の会   29 Mar 2015   
次世代シーケンサーを用いた未知の海洋細菌―ウイルス感染系の推定
緒方博之
日本水産学会春季大会(2015/3/27-31)   29 Mar 2015   Tokyo
海洋巨大ウイルスの進化と生態 [Invited]
Hiroyuki Ogata
京都大学生態研センターセミナー   20 Feb 2015   
巨大ウイルスは海洋生態系進化の原動力である
緒方博之
第37回日本分子生物学会年会   25 Nov 2014   Yokohama
ウイルスは生命か?−巨大ウイルスを中心に−
緒方博之
平成26年第二回化学研究所イブニングセミナー   12 Nov 2014   ICR,Uji
次世代配列解析による海洋ウイルスと宿主の相互作用の解析
西村陽介
生命情報科学若手の会 第6回研究会(2014/10/29-30)   29 Oct 2014   CDB, Kobe
Why do some viruses encode amino acid biosynthetic genes?
Mihara T.
Informatics in Biology, Medicine and Pharmocology 2014(2014/10/2-4)   2 Oct 2014   Sendai
Marine viral genomics: from genetic diversity to ecological implications. [Invited]
Ogata H.
Sweden-Kyoto Symposium(2014/9/11-12)   2 Sep 2014   Stockholm University/Karolinska Institute, Stockholm
Exploring Polyketide Synthases from Huge Metagenomic Samples.
Shimizu Y.
14th International Workshop on Bioinformatics and Systems Biology (IBSB) 2014/7/20-25   21 Jul 2014   Berlin
Tools to Interpret Large Genomic and Metagenomic Data using KEGG Databases.
Goto S.
14th International Workshop on Bioinformatics and Systems Biology (IBSB) 2014/7/20-25   20 Jul 2014   Berlin