黒川顕 (Ken Kurokawa) - 論文

Enhanced tameness byLimosilactobacillus reuterifrom gut microbiota of selectively bred mice

Bhim B. Biswa, Hiroshi Mori, Atsushi Toyoda, Ken Kurokawa, Tsuyoshi Koide

2024年3月12日

Behaviors of nucleosomes with mutant histone H4s in euchromatic domains of living human cells

Adilgazy Semeigazin, Shiori Iida, Katsuhiko Minami, Sachiko Tamura, Satoru Ide, Koichi Higashi, Atsushi Toyoda, Ken Kurokawa, Kazuhiro Maeshima

2024年2月15日

Metagenomic Thermometer

Masaomi Kurokawa, Koichi Higashi, Keisuke Yoshida, Tomohiko Sato, Shigenori Maruyama, Hiroshi Mori, Ken Kurokawa

DNA Research 2023年12月1日査読有り

Transcriptome profile of subsynaptic myonuclei at the neuromuscular junction in embryogenesis

Bisei Ohkawara, Masaomi Kurokawa, Akinori Kanai, Kiyomi Imamura, Guiying Chen, Ruchen Zhang, Akio Masuda, Koichi Higashi, Hiroshi Mori, Yutaka Suzuki …

Journal of Neurochemistry 2023年11月23日査読有り

Chromatin organization and behavior in HRAS-transformed mouse fibroblasts

Aoi Otsuka, Katsuhiko Minami, Koichi Higashi, Akane Kawaguchi, Sachiko Tamura, Satoru Ide, Michael J. Hendzel, Ken Kurokawa, Kazuhiro Maeshima

2023年11月21日査読有り

Assessment of metagenomic workflows using a newly constructed human gut microbiome mock community.

Hiroshi Mori, Tamotsu Kato, Hiroaki Ozawa, Mitsuo Sakamoto, Takumi Murakami, Todd D Taylor, Atsushi Toyoda, Moriya Ohkuma, Ken Kurokawa, Hiroshi Ohno

DNA research : an international journal for rapid publication of reports on genes and genomes 30(3) 2023年6月1日査読有り

Diversity and compositional differences of the airborne microbiome in a biophilic indoor environment

Akinobu Toyoda, Yusuke Shibata, Yuzy Matsuo, Kumi Terada, Hiroki Sugimoto, Koichi Higashi, Hiroshi Mori, Akinori Ikeuchi, Masakazu Ito, Ken Kurokawa …

Scientific Reports 13(1) 2023年5月20日査読有り

Condensed but liquid-like domain organization of active chromatin regions in living human cells.

Tadasu Nozaki, Soya Shinkai, Satoru Ide, Koichi Higashi, Sachiko Tamura, Masa A Shimazoe, Masaki Nakagawa, Yutaka Suzuki, Yasushi Okada, Masaki Sasai …

Science advances 9(14) eadf1488 2023年4月5日査読有り

Unique H2-utilizing lithotrophy in serpentinite-hosted systems.

Masaru Konishi Nobu, Ryosuke Nakai, Satoshi Tamazawa, Hiroshi Mori, Atsushi Toyoda, Akira Ijiri, Shino Suzuki, Ken Kurokawa, Yoichi Kamagata, Hideyuki Tamaki

The ISME journal 17(1) 95-104 2022年10月7日査読有り

Omics profiles of fecal and oral microbiota change in irritable bowel syndrome patients with diarrhea and symptom exacerbation.

Yukari Tanaka, Riu Yamashita, Junko Kawashima, Hiroshi Mori, Ken Kurokawa, Shinji Fukuda, Yasuhiro Gotoh, Keiji Nakamura, Tetsuya Hayashi, Yoshiyuki Kasahara …

Journal of gastroenterology 57(10) 748-760 2022年7月30日査読有り

Metagenomic Thermometer

Masaomi Kurokawa, Koichi Higashi, Keisuke Yoshida, Tomohiko Sato, Shigenori Maruyama, Hiroshi Mori, Ken Kurokawa

2022年7月16日

Correction to: Allochromatium tepidum, sp. nov., a hot spring species of purple sulfur bacteria.

Michael T Madigan, Jill N Absher, Joseph E Mayers, Marie Asao, Deborah O Jung, Kelly S Bender, Megan L Kempher, Mackenzie K Hayward, Sophia A Sanguedolce, Abigail C Brown …

Archives of microbiology 204(4) 209-209 2022年3月11日査読有り

PZLAST: an ultra-fast sequence similarity search tool implemented on a MIMD processor

Hitoshi Ishikawa, Hiroshi Mori, Koichi Higashi, Yoshiaki Kato, Tomofumi Sakai, Toshikazu Ebisuzaki, Ken Kurokawa

International Journal of Networking and Computing 12(2) 446-466 2022年査読有り最終著者

Allochromatium tepidum, sp. nov., a hot spring species of purple sulfur bacteria

Michael T. Madigan, Jill N. Absher, Joseph E. Mayers, Marie Asao, Deborah O. Jung, Kelly S. Bender, Megan L. Kempher, Mackenzie K. Hayward, Sophia A. Sanguedolce, Abigail C. Brown …

Archives of Microbiology 204(1) 115-115 2022年1月査読有り

PZLAST: an ultra-fast sequence similarity search tool implemented on a MIMD processor

Hitoshi Ishikawa, Hiroshi Mori, Koichi Higashi, Yoshiaki Kato, Tomofumi Sakai, Toshikazu Ebisuzaki, Ken Kurokawa

2021 Ninth International Symposium on Computing and Networking (CANDAR) 12(2) 446-466 2021年11月査読有り最終著者

Analysis of genomic characteristics and their influence on metabolism in Aspergillus luchuensis albino mutants using genome sequencing.

Nozomi Yamamoto, Naoki Watarai, Hitoshi Koyano, Kazunori Sawada, Atsushi Toyoda, Ken Kurokawa, Takuji Yamada

Fungal genetics and biology : FG & B 155 103601-103601 2021年10月査読有り

Comprehensive discovery of CRISPR-targeted terminally redundant sequences in the human gut metagenome: Viruses, plasmids, and more.

Ryota Sugimoto, Luca Nishimura, Phuong Thanh Nguyen, Jumpei Ito, Nicholas F Parrish, Hiroshi Mori, Ken Kurokawa, Hirofumi Nakaoka, Ituro Inoue

PLoS computational biology 17(10) e1009428 2021年10月査読有り

Key bacterial taxa and metabolic pathways affecting gut short-chain fatty acid profiles in early life.

Naoki Tsukuda, Kana Yahagi, Taeko Hara, Yohei Watanabe, Hoshitaka Matsumoto, Hiroshi Mori, Koichi Higashi, Hirokazu Tsuji, Satoshi Matsumoto, Ken Kurokawa …

The ISME journal 15(9) 2574-2590 2021年9月査読有り

PZLAST: an ultra-fast amino acid sequence similarity search server against public metagenomes.

Hiroshi Mori, Hitoshi Ishikawa, Koichi Higashi, Yoshiaki Kato, Toshikazu Ebisuzaki, Ken Kurokawa

Bioinformatics (Oxford, England) 2021年7月7日査読有り

Erratum to: Aberrant mucosal immunoreaction to tonsillar microbiota in immunoglobulin A nephropathy.

Hiroki Yamaguchi, Shin Goto, Nao Takahashi, Masafumi Tsuchida, Hirofumi Watanabe, Suguru Yamamoto, Yoshikatsu Kaneko, Koichi Higashi, Hiroshi Mori, Yukio Nakamura …

Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association 2021年1月4日査読有り

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