Kouji Hirota

J-GLOBAL         Last updated: Sep 7, 2018 at 15:12
 
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Name
Kouji Hirota
E-mail
khirotatmu.ac.jp
Affiliation
Tokyo Metropolitan University

Research Areas

 
 

Published Papers

 
Umeda M, Tsunekawa C, Senmatsu S, Asada R, Abe T, Ohta K, Hoffman CS, Hirota K
Molecular and cellular biology   38(18)    Sep 2018   [Refereed]
Nakazato A, Kajita K, Ooka M, Akagawa R, Abe T, Takeda S, Branzei D, Hirota K
DNA repair   68 50-57   Aug 2018   [Refereed]
Abe T, Ooka M, Kawasumi R, Miyata K, Takata M, Hirota K, Branzei D
Proceedings of the National Academy of Sciences of the United States of America   115(33) 8412-8417   Aug 2018   [Refereed]
Abe T, Kawasumi R, Giannattasio M, Dusi S, Yoshimoto Y, Miyata K, Umemura K, Hirota K, Branzei D
Nature communications   9(1) 3091   Aug 2018   [Refereed]
Saha LK, Kim S, Kang H, Akter S, Choi K, Sakuma T, Yamamoto T, Sasanuma H, Hirota K, Nakamura J, Honma M, Takeda S, Dertinger S
Environmental and molecular mutagenesis   59(6) 529-538   Jul 2018   [Refereed]
Adachi A, Senmatsu S, Asada R, Abe T, Hoffman CS, Ohta K, Hirota K
Genes & genetic systems   92(6) 267-276   May 2018   [Refereed]
Ooka M, Abe T, Cho K, Koike K, Takeda S, Hirota K
PloS one   13(2) e0192421   2018   [Refereed]
Kawasumi R, Abe T, Arakawa H, Garre M, Hirota K, Branzei D
Genes & development   31(21) 2136-2150   Nov 2017   [Refereed]
Asada R, Umeda M, Adachi A, Senmatsu S, Abe T, Iwasaki H, Ohta K, Hoffman CS, Hirota K
Nucleic acids research   45(16) 9361-9371   Sep 2017   [Refereed]
Tsuda M, Terada K, Ooka M, Kobayashi K, Sasanuma H, Fujisawa R, Tsurimoto T, Yamamoto J, Iwai S, Kadoda K, Akagawa R, Huang SN, Pommier Y, Sale JE, Takeda S, Hirota K
Oncotarget   8(20) 33457-33474   May 2017   [Refereed]
Fujisawa R, Ohashi E, Hirota K, Tsurimoto T
Nucleic acids research   45(8) 4550-4563   May 2017   [Refereed]
[Transcription of mRNA-type long non-coding RNA disrupts chromatin array].
Hirota K, Ohta K
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme   54(6) 735-741   May 2009   [Refereed]
Tsuda M, Cho K, Ooka M, Shimizu N, Watanabe R, Yasui A, Nakazawa Y, Ogi T, Harada H, Agama K, Nakamura J, Asada R, Fujiike H, Sakuma T, Yamamoto T, Murai J, Hiraoka M, Koike K, Pommier Y, Takeda S, Hirota K
PloS one   12(11) e0188320   2017   [Refereed]
Hirota K, Ohta K
Epigenetics   4(1) 5-7   Jan 2009   [Refereed]
Ooka M, Kobayashi K, Abe T, Akiyama K, Hada M, Takeda S, Hirota K
Chemosphere   164 106-112   Dec 2016   [Refereed]
Hirota K, Miyoshi T, Kugou K, Hoffman CS, Shibata T, Ohta K
Nature   456(7218) 130-134   Nov 2008   [Refereed]
Hirota K, Tsuda M, Mohiuddin, Tsurimoto T, Cohen IS, Livneh Z, Kobayashi K, Narita T, Nishihara K, Murai J, Iwai S, Guilbaud G, Sale JE, Takeda S
Nucleic acids research   44(15) 7242-7250   Sep 2016   [Refereed]
Yamada K, Hirota K, Mizuno K, Shibata T, Ohta K
Genes & genetic systems   83(5) 361-372   Oct 2008   [Refereed]
Kobayashi K, Guilliam TA, Tsuda M, Yamamoto J, Bailey LJ, Iwai S, Takeda S, Doherty AJ, Hirota K
Cell cycle (Georgetown, Tex.)   15(15) 1997-2008   Aug 2016   [Refereed]
Hikiba J, Hirota K, Kagawa W, Ikawa S, Kinebuchi T, Sakane I, Takizawa Y, Yokoyama S, Mandon-Pépin B, Nicolas A, Shibata T, Ohta K, Kurumizaka H
Nucleic acids research   36(12) 4181-4190   Jul 2008   [Refereed]
Takemata N, Oda A, Yamada T, Galipon J, Miyoshi T, Suzuki Y, Sugano S, Hoffman CS, Hirota K, Ohta K
Nucleic acids research   44(11) 5174-5189   Jun 2016   [Refereed]
Hirota K, Mizuno K, Shibata T, Ohta K
Molecular biology of the cell   19(3) 1162-1173   Mar 2008   [Refereed]
Yamamoto J, Takahata C, Kuraoka I, Hirota K, Iwai S
Molecules (Basel, Switzerland)   21(6)    Jun 2016   [Refereed]
Sasanuma H, Hirota K, Fukuda T, Kakusho N, Kugou K, Kawasaki Y, Shibata T, Masai H, Ohta K
Genes & development   22(3) 398-410   Feb 2008   [Refereed]
Hirota K, Steiner WW, Shibata T, Ohta K
Eukaryotic cell   6(11) 2072-2080   Nov 2007   [Refereed]
Hoa NN, Akagawa R, Yamasaki T, Hirota K, Sasa K, Natsume T, Kobayashi J, Sakuma T, Yamamoto T, Komatsu K, Kanemaki MT, Pommier Y, Takeda S, Sasanuma H
Genes to cells : devoted to molecular & cellular mechanisms   20(12) 1059-1076   Dec 2015   [Refereed]
Hirota K, Hoffman CS, Ohta K
Eukaryotic cell   5(12) 1980-1989   Dec 2006   [Refereed]
Shimizu N, Ooka M, Takagi T, Takeda S, Hirota K
Radiation research   184(4) 442-448   Oct 2015   [Refereed]
Tada K, Kobayashi M, Takiuchi Y, Iwai F, Sakamoto T, Nagata K, Shinohara M, Io K, Shirakawa K, Hishizawa M, Shindo K, Kadowaki N, Hirota K, Yamamoto J, Iwai S, Sasanuma H, Takeda S, Takaori-Kondo A
Science advances   1(3) e1400203   Apr 2015   [Refereed]
Asada R, Takemata N, Hoffman CS, Ohta K, Hirota K
Molecular and cellular biology   35(5) 847-855   Mar 2015   [Refereed]
Hirota K, Yoshikiyo K, Guilbaud G, Tsurimoto T, Murai J, Tsuda M, Phillips LG, Narita T, Nishihara K, Kobayashi K, Yamada K, Nakamura J, Pommier Y, Lehmann A, Sale JE, Takeda S
Nucleic acids research   43(3) 1671-1683   Feb 2015   [Refereed]
Kobayashi K, Fujii T, Asada R, Ooka M, Hirota K
PloS one   10(3) e0122006   2015   [Refereed]
Hirota K, Tsuda M, Murai J, Takagi T, Keka IS, Narita T, Fujita M, Sasanuma H, Kobayashi J, Takeda S
Genes to cells : devoted to molecular & cellular mechanisms   19(10) 743-754   Oct 2014   [Refereed]
Al Abo M, Dejsuphong D, Hirota K, Yonetani Y, Yamazoe M, Kurumizaka H, Takeda S
Cancer research   74(3) 797-807   Feb 2014   [Refereed]
Sabouri S, Kobayashi M, Begum NA, Xu J, Hirota K, Honjo T
Proceedings of the National Academy of Sciences of the United States of America   111(6) 2253-2258   Feb 2014   [Refereed]
Mohiuddin, Keka IS, Evans TJ, Hirota K, Shimizu H, Kono K, Takeda S, Hirano S
Archives of toxicology   88(1) 145-160   Jan 2014   [Refereed]
Yamamoto KN, Hirota K, Takeda S, Haeno H
PloS one   9(8) e105724   2014   [Refereed]
Saito Y, Takeda J, Adachi K, Nobe Y, Kobayashi J, Hirota K, Oliveira DV, Taoka M, Isobe T
PloS one   9(11) e112488   2014   [Refereed]
Taoka M, Ishikawa D, Nobe Y, Ishikawa H, Yamauchi Y, Terukina G, Nakayama H, Hirota K, Takahashi N, Isobe T
PloS one   9(11) e112156   2014   [Refereed]
Kikuchi K, Narita T, Pham VT, Iijima J, Hirota K, Keka IS, Mohiuddin, Okawa K, Hori T, Fukagawa T, Essers J, Kanaar R, Whitby MC, Sugasawa K, Taniguchi Y, Kitagawa K, Takeda S
Cancer research   73(14) 4362-4371   Jul 2013   [Refereed]
Fujita M, Sasanuma H, Yamamoto KN, Harada H, Kurosawa A, Adachi N, Omura M, Hiraoka M, Takeda S, Hirota K
PloS one   8(4) e60043   2013   [Refereed]
Saito Y, Takeda J, Okada M, Kobayashi J, Kato A, Hirota K, Taoka M, Matsumoto T, Komatsu K, Isobe T
Scientific reports   3 2022   2013   [Refereed]
Miyoshi T, Ito M, Kugou K, Yamada S, Furuichi M, Oda A, Yamada T, Hirota K, Masai H, Ohta K
Molecular cell   47(5) 722-733   Sep 2012   [Refereed]
Yamamoto KN, Hirota K, Kono K, Takeda S, Sakamuru S, Xia M, Huang R, Austin CP, Witt KL, Tice RR
Environmental and molecular mutagenesis   52(7) 547-561   Aug 2011   [Refereed]
Takaku M, Tsujita T, Horikoshi N, Takizawa Y, Qing Y, Hirota K, Ikura M, Ikura T, Takeda S, Kurumizaka H
Biochemistry   50(32) 6797-6805   Aug 2011   [Refereed]
Qing Y, Yamazoe M, Hirota K, Dejsuphong D, Sakai W, Yamamoto KN, Bishop DK, Wu X, Takeda S
PLoS genetics   7(7) e1002148   Jul 2011   [Refereed]
Murai J, Yang K, Dejsuphong D, Hirota K, Takeda S, D'Andrea AD
Molecular and cellular biology   31(12) 2462-2469   Jun 2011   [Refereed]
Yamamoto KN, Kobayashi S, Tsuda M, Kurumizaka H, Takata M, Kono K, Jiricny J, Takeda S, Hirota K
Proceedings of the National Academy of Sciences of the United States of America   108(16) 6492-6496   Apr 2011   [Refereed]
Evans TJ, Yamamoto KN, Hirota K, Takeda S
DNA repair   9(12) 1292-1298   Dec 2010   [Refereed]
Narita T, Tsurimoto T, Yamamoto J, Nishihara K, Ogawa K, Ohashi E, Evans T, Iwai S, Takeda S, Hirota K
Genes to cells : devoted to molecular & cellular mechanisms   15(12) 1228-1239   Dec 2010   [Refereed]
Yoshikiyo K, Kratz K, Hirota K, Nishihara K, Takata M, Kurumizaka H, Horimoto S, Takeda S, Jiricny J
Proceedings of the National Academy of Sciences of the United States of America   107(50) 21553-21557   Dec 2010   [Refereed]
Nemoto N, Udagawa T, Ohira T, Jiang L, Hirota K, Wilkinson CR, Bähler J, Jones N, Ohta K, Wek RC, Asano K
Journal of molecular biology   404(2) 183-201   Nov 2010   [Refereed]
Hirota K, Sonoda E, Kawamoto T, Motegi A, Masutani C, Hanaoka F, Szüts D, Iwai S, Sale JE, Lehmann A, Takeda S
PLoS genetics   6(10)    Oct 2010   [Refereed]
Takizawa Y, Qing Y, Takaku M, Ishida T, Morozumi Y, Tsujita T, Kogame T, Hirota K, Takahashi M, Shibata T, Kurumizaka H, Takeda S
Nucleic acids research   38(15) 5059-5074   Aug 2010   [Refereed]
Kohzaki M, Nishihara K, Hirota K, Sonoda E, Yoshimura M, Ekino S, Butler JE, Watanabe M, Halazonetis TD, Takeda S
The Journal of cell biology   189(7) 1117-1127   Jun 2010   [Refereed]
Kikuchi K, Abdel-Aziz HI, Taniguchi Y, Yamazoe M, Takeda S, Hirota K
The Journal of biological chemistry   284(39) 26360-26367   Sep 2009   [Refereed]
Transcription of mRNA-type long non-coding RNAs (mlonRNAs) disrupts chromatin array.
Hirota K, Ohta K
Communicative & integrative biology   2(1) 25-26   2009   [Refereed]
Hirota K, Fukuda T, Yamada T, Ohta K
Methods in molecular biology (Clifton, N.J.)   557 253-266   2009   [Refereed]
Ogino K, Hirota K, Matsumoto S, Takeda T, Ohta K, Arai K, Masai H
Proceedings of the National Academy of Sciences of the United States of America   103(21) 8131-8136   May 2006   [Refereed]
Davidson MK, Shandilya HK, Hirota K, Ohta K, Wahls WP
The Journal of biological chemistry   279(49) 50857-50863   Dec 2004   [Refereed]
Yamada T, Mizuno K, Hirota K, Kon N, Wahls WP, Hartsuiker E, Murofushi H, Shibata T, Ohta K
The EMBO journal   23(8) 1792-1803   Apr 2004   [Refereed]
Hirota K, Hasemi T, Yamada T, Mizuno KI, Hoffman CS, Shibata T, Ohta K
Nucleic acids research   32(2) 855-862   2004   [Refereed]
Fission yeast Tup1-like repressors repress chromatin remodeling at the fbp1+ promoter and the ade6-M26 recombination hotspot.
Hirota K, Hoffman CS, Shibata T, Ohta K
Genetics   165(2) 505-515   Oct 2003   [Refereed]
Hirota K, Tanaka K, Ohta K, Yamamoto M
Molecular biology of the cell   14(9) 3617-3627   Sep 2003   [Refereed]
Hirota K, Tanaka K, Watanabe Y, Yamamoto M
Genes Cells   6 201-214   Jan 2001   [Refereed]