矢原耕史 (Koji Yahara) - 論文

Emergence of the mobile RND-type efflux pump gene cluster tmexCD1-toprJ1 in Klebsiella pneumoniae clinical isolates in Japan

Aki Hirabayashi, Hirokazu Yano, Koji Yahara, Sadao Aoki, Yo Sugawara, Toshiki Kajihara, Naomi Shibayama, Shizuo Kayama, Masato Suzuki, Motoyuki Sugai

Journal of Antimicrobial Chemotherapy 2024年11月6日

Lipid Fingerprinting by MALDI Biotyper Sirius Instrument Fails to Differentiate the Three Subspecies of theMycobacterium abscessusComplex

Mitsunori Yoshida, Hanako Fukano, Koji Yahara, Satoshi Nakano, Takeshi Komine, Masato Suzuki, Azumi Fujinaga, Kohei Dohke, Yoshihiko Hoshino

2024年9月25日

Effects of coronavirus disease 2019 on the spread of respiratory-transmitted human-to-human bacteria.

Toshiki Kajihara, Koji Yahara, Taro Kamigaki, Aki Hirabayashi, Yumiko Hosaka, Norikazu Kitamura, Reiko Shimbashi, Motoi Suzuki, Motoyuki Sugai, Keigo Shibayama

The Journal of infection 89(2) 106201-106201 2024年8月

Clinical outcomes of flomoxef versus cefmetazole in hospitalized patients with urinary tract infections: Combined retrospective analyses of two real-world databases and in vitro data

Takahiro Niimura, Mitsuhiro Goda, Satoshi Nakano, Toshiki Kajihara, Koji Yahara, Aki Hirabayashi, Koji Miyata, Marie Ikai, Motoko Shinohara, Yusuke Minato …

medRxiv 2024年7月17日

Comparison of disease and economic burden between MRSA infection and MRSA colonization in a university hospital: a retrospective data integration study.

Aki Hirabayashi, Koji Yahara, Keisuke Oka, Toshiki Kajihara, Teruko Ohkura, Yumiko Hosaka, Keigo Shibayama, Motoyuki Sugai, Tetsuya Yagi

Antimicrobial resistance and infection control 13(1) 27-27 2024年2月29日

Exploring the effects of antimicrobial treatment on the gut and oral microbiomes and resistomes from elderly long-term care facility residents via shotgun DNA sequencing

Norikazu Kitamura, Toshiki Kajihara, Camila Gazolla Volpiano, Myo Naung, Guillaume Méric, Aki Hirabayashi, Hirokazu Yano, Masaya Yamamoto, Fumiaki Yoshida, Tsunesaburo Kobayashi …

Microbial Genomics 10(2) 2024年2月20日

Antimicrobial use and combination of resistance phenotypes in bacteraemic Escherichia coli in primary care: a study based on Japanese national data in 2018.

Yumiko Hosaka, Yuichi Muraki, Toshiki Kajihara, Sayoko Kawakami, Aki Hirabayashi, Masahiro Shimojima, Hiroki Ohge, Motoyuki Sugai, Koji Yahara

The Journal of antimicrobial chemotherapy 79(2) 312-319 2024年2月1日

Shotgun metagenomic analysis of saliva microbiome suggests Mogibacterium as a factor associated with chronic bacterial osteomyelitis.

Hiroko Yahara, Souichi Yanamoto, Miho Takahashi, Yuji Hamada, Takuya Asaka, Yoshimasa Kitagawa, Kuniyasu Moridera, Kazuma Noguchi, Yutaka Maruoka, Koji Yahara

PloS one 19(5) e0302569 2024年

Development of selective isolation media for detecting the genera Actinomyces and Schaalia from oral specimens containing indigenous bacteria.

Sadao Aoki, Hiroko Yahara, Ryoma Nakao, Osamu Tsuzukibashi, Koji Yahara

Access microbiology 6(5) 2024年

Nationwide genome surveillance of carbapenem-resistantPseudomonas aeruginosain Japan

Hirokazu Yano, Wataru Hayashi, Sayoko Kawakami, Sadao Aoki, Eiko Anzai, Norikazu Kitamura, Aki Hirabayashi, Toshiki Kajihara, Shizuo Kayama, Yo Sugawara …

2023年12月19日

National genomic surveillance integrating standardized quantitative susceptibility testing clarifies antimicrobial resistance in Enterobacterales

Shizuo Kayama, Koji Yahara, Yo Sugawara, Sayoko Kawakami, Kohei Kondo, Hui Zuo, Shoko Kutsuno, Norikazu Kitamura, Aki Hirabayashi, Toshiki Kajihara …

Nature Communications 14(1) 2023年12月5日

Author Correction: Repeated out-of-Africa expansions of Helicobacter pylori driven by replacement of deleterious mutations (Nature Communications, (2022), 13, 1, (6842), 10.1038/s41467-022-34475-3)

Harry A. Thorpe, Elise Tourrette, Koji Yahara, Filipa F. Vale, Siqi Liu, Mónica Oleastro, Teresa Alarcon, Tsachi Tsadok Perets, Saeid Latifi-Navid, Yoshio Yamaoka …

Nature Communications 14(1) 2023年12月

Corrigendum: 'Genome-wide association study of gastric cancer- and duodenal ulcer-derived Helicobacter pylori strains reveals discriminatory genetic variations and novel oncoprotein candidates'

Vo Phuoc Tuan, Koji Yahara, Ho Dang Quy Dung, Tran Thanh Binh, Pham Huu Tung, Tran Dinh Tri, Ngo Phuong Minh Thuan, Vu Van Khien, Tran Thi Huyen Trang, Bui Hoang Phuc …

Microbial genomics 9(7) 2023年7月1日

Corrigendum: 'Genome-wide association study of gastric cancer- and duodenal ulcer-derived Helicobacter pylori strains reveals discriminatory genetic variations and novel oncoprotein candidates'.

Vo Phuoc Tuan, Koji Yahara, Ho Dang Quy Dung, Tran Thanh Binh, Pham Huu Tung, Tran Dinh Tri, Ngo Phuong Minh Thuan, Vu Van Khien, Tran Thi Huyen Trang, Bui Hoang Phuc …

Microbial genomics 9(7) 2023年7月

Distribution, Trends, and Antimicrobial Susceptibility of Bacteroides, Clostridium, Fusobacterium, and Prevotella Species Causing Bacteremia in Japan During 2011-2020: A Retrospective Observational Study Based on National Surveillance Data.

Toshiki Kajihara, Koji Yahara, Norikazu Kitamura, Aki Hirabayashi, Yumiko Hosaka, Motoyuki Sugai

Open forum infectious diseases 10(7) ofad334 2023年7月

Author Correction: Repeated out-of-Africa expansions of Helicobacter pylori driven by replacement of deleterious mutations.

Harry A Thorpe, Elise Tourrette, Koji Yahara, Filipa F Vale, Siqi Liu, Mónica Oleastro, Teresa Alarcon, Tsachi-Tsadok Perets, Saeid Latifi-Navid, Yoshio Yamaoka …

Nature communications 14(1) 1539-1539 2023年3月20日

院内における多剤耐性菌の感染制御-サーベイランス確立に向けて- JANISでの取り組み

川上小夜子, 矢原耕史, 梶原俊毅, 平林亜希, 保阪由美子, 菅井基行

日本感染症学会総会・学術講演会・日本化学療法学会学術集会合同学会プログラム・抄録集 97回・71回ジョイントシンポジウム1-ジョイントシンポジウム1 2023年3月

Association between the proportion of laparoscopic approaches for digestive surgeries and the incidence of consequent surgical site infections, 2009–2019: A retrospective observational study based on national surveillance data in Japan

Toshiki Kajihara, Koji Yahara, Aki Hirabayashi, Yumiko Hosaka, Norikazu Kitamura, Motoyuki Sugai, Keigo Shibayama

PLOS ONE 18(2) e0281838-e0281838 2023年2月17日

黄色ブドウ球菌における多剤耐性表現型のサーベイランスとWGS所見との相関性(Surveillance of multidrug resistance phenotypes in S. aureus and correlation with WGS findings)

矢原耕史, 保阪由美子, Clarck Adam, 北川浩樹, 久恒順三, 菅井基行, 柴山恵吾, Stelling John

日本細菌学雑誌 78(1) 105-105 2023年2月

Genomic Epidemiological Analysis of Antimicrobial-Resistant Bacteria with Nanopore Sequencing.

Masato Suzuki, Yusuke Hashimoto, Aki Hirabayashi, Koji Yahara, Mitsunori Yoshida, Hanako Fukano, Yoshihiko Hoshino, Keigo Shibayama, Haruyoshi Tomita