矢原耕史 (Koji Yahara) - 論文

National genomic surveillance integrating standardized quantitative susceptibility testing clarifies antimicrobial resistance in Enterobacterales

Shizuo Kayama, Koji Yahara, Yo Sugawara, Sayoko Kawakami, Kohei Kondo, Hui Zuo, Shoko Kutsuno, Norikazu Kitamura, Aki Hirabayashi, Toshiki Kajihara …

Nature Communications 14(1) 2023年12月5日

Author Correction: Repeated out-of-Africa expansions of Helicobacter pylori driven by replacement of deleterious mutations (Nature Communications, (2022), 13, 1, (6842), 10.1038/s41467-022-34475-3)

Harry A. Thorpe, Elise Tourrette, Koji Yahara, Filipa F. Vale, Siqi Liu, Mónica Oleastro, Teresa Alarcon, Tsachi Tsadok Perets, Saeid Latifi-Navid, Yoshio Yamaoka …

Nature Communications 14(1) 2023年12月

Corrigendum: 'Genome-wide association study of gastric cancer- and duodenal ulcer-derived Helicobacter pylori strains reveals discriminatory genetic variations and novel oncoprotein candidates'

Vo Phuoc Tuan, Koji Yahara, Ho Dang Quy Dung, Tran Thanh Binh, Pham Huu Tung, Tran Dinh Tri, Ngo Phuong Minh Thuan, Vu Van Khien, Tran Thi Huyen Trang, Bui Hoang Phuc …

Microbial genomics 9(7) 2023年7月1日

Corrigendum: 'Genome-wide association study of gastric cancer- and duodenal ulcer-derived Helicobacter pylori strains reveals discriminatory genetic variations and novel oncoprotein candidates'.

Vo Phuoc Tuan, Koji Yahara, Ho Dang Quy Dung, Tran Thanh Binh, Pham Huu Tung, Tran Dinh Tri, Ngo Phuong Minh Thuan, Vu Van Khien, Tran Thi Huyen Trang, Bui Hoang Phuc …

Microbial genomics 9(7) 2023年7月

Distribution, Trends, and Antimicrobial Susceptibility of Bacteroides, Clostridium, Fusobacterium, and Prevotella Species Causing Bacteremia in Japan During 2011-2020: A Retrospective Observational Study Based on National Surveillance Data.

Toshiki Kajihara, Koji Yahara, Norikazu Kitamura, Aki Hirabayashi, Yumiko Hosaka, Motoyuki Sugai

Open forum infectious diseases 10(7) ofad334 2023年7月

Author Correction: Repeated out-of-Africa expansions of Helicobacter pylori driven by replacement of deleterious mutations.

Harry A Thorpe, Elise Tourrette, Koji Yahara, Filipa F Vale, Siqi Liu, Mónica Oleastro, Teresa Alarcon, Tsachi-Tsadok Perets, Saeid Latifi-Navid, Yoshio Yamaoka …

Nature communications 14(1) 1539-1539 2023年3月20日

院内における多剤耐性菌の感染制御-サーベイランス確立に向けて- JANISでの取り組み

川上小夜子, 矢原耕史, 梶原俊毅, 平林亜希, 保阪由美子, 菅井基行

日本感染症学会総会・学術講演会・日本化学療法学会学術集会合同学会プログラム・抄録集 97回・71回ジョイントシンポジウム1-ジョイントシンポジウム1 2023年3月

Association between the proportion of laparoscopic approaches for digestive surgeries and the incidence of consequent surgical site infections, 2009–2019: A retrospective observational study based on national surveillance data in Japan

Toshiki Kajihara, Koji Yahara, Aki Hirabayashi, Yumiko Hosaka, Norikazu Kitamura, Motoyuki Sugai, Keigo Shibayama

PLOS ONE 18(2) e0281838-e0281838 2023年2月17日

黄色ブドウ球菌における多剤耐性表現型のサーベイランスとWGS所見との相関性(Surveillance of multidrug resistance phenotypes in S. aureus and correlation with WGS findings)

矢原耕史, 保阪由美子, Clarck Adam, 北川浩樹, 久恒順三, 菅井基行, 柴山恵吾, Stelling John

日本細菌学雑誌 78(1) 105-105 2023年2月

Genomic Epidemiological Analysis of Antimicrobial-Resistant Bacteria with Nanopore Sequencing.

Masato Suzuki, Yusuke Hashimoto, Aki Hirabayashi, Koji Yahara, Mitsunori Yoshida, Hanako Fukano, Yoshihiko Hoshino, Keigo Shibayama, Haruyoshi Tomita

Methods in molecular biology (Clifton, N.J.) 2632 227-246 2023年

Repeated out-of-Africa expansions of Helicobacter pylori driven by replacement of deleterious mutations

Harry A. Thorpe, Elise Tourrette, Koji Yahara, Filipa F. Vale, Siqi Liu, Mónica Oleastro, Teresa Alarcon, Tsachi Tsadok Perets, Saeid Latifi-Navid, Yoshio Yamaoka …

Nature Communications 13(1) 2022年12月

Whole blood transcriptome profiling identifies gene expression subnetworks and a key gene characteristic of the rare type of osteomyelitis.

Hiroko Yahara, Souichi Yanamoto, Miho Takahashi, Yuji Hamada, Haruo Sakamoto, Takuya Asaka, Yoshimasa Kitagawa, Kuniyasu Moridera, Kazuma Noguchi, Masaya Sugiyama …

Biochemistry and biophysics reports 32 101328-101328 2022年12月

Repeated out-of-Africa expansions of Helicobacter pylori driven by replacement of deleterious mutations.

Harry A Thorpe, Elise Tourrette, Koji Yahara, Filipa F Vale, Siqi Liu, Mónica Oleastro, Teresa Alarcon, Tsachi-Tsadok Perets, Saeid Latifi-Navid, Yoshio Yamaoka …

Nature communications 13(1) 6842-6842 2022年11月11日

Distribution, trends, and antifungal susceptibility of Candida species causing candidemia in Japan, 2010-2019: A retrospective observational study based on national surveillance data.

Toshiki Kajihara, Koji Yahara, Minoru Nagi, Norikazu Kitamura, Aki Hirabayashi, Yumiko Hosaka, Masahiro Abe, Yoshitsugu Miyazaki, Motoyuki Sugai

Medical mycology 60(9) 2022年9月29日

Genomic epidemiology and temperature dependency of hypermucoviscous Klebsiella pneumoniae in Japan

Le MN, Kayama S, Wyres KL, Yu L, Hisatsune J, Suzuki M, Yahara K, Terachi T, Sawa K, Takahashi S …

Microbial Genomics 8(5) 2022年5月27日査読有り

Genome-wide association study of gastric cancer- and duodenal ulcer-derived Helicobacter pylori strains reveals discriminatory genetic variations and novel oncoprotein candidates.

Vo Phuoc Tuan, Koji Yahara, Ho Dang Quy Dung, Tran Thanh Binh, Pham Huu Tung, Tran Dinh Tri, Ngo Phuong Minh Thuan, Vu Van Khien, Tran Thi Huyen Trang, Bui Hoang Phuc …

Microbial genomics 7(11) 2021年11月

The use of topical antibiotics based on National Database of Health Insurance Claims and Specific Health Checkups of Japan (NDB) Open Data in 2017.

Tomoko Nakanishi, Ryo Inose, Yoshiki Kusama, Masahiro Ishikane, Toshiki Kajihara, Koji Yahara, Motoyuki Sugai, Hiroki Ohge, Norio Ohmagari, Yuichi Muraki

Japanese journal of infectious diseases 75(2) 177-182 2021年9月30日

Impact of the COVID-19 pandemic on the surveillance of antimicrobial resistance.

Aki Hirabayashi, Toshiki Kajihara, Koji Yahara, Keigo Shibayama, Motoyuki Sugai

The Journal of hospital infection 2021年9月22日

Disease burden of bloodstream infections caused by antimicrobial-resistant bacteria: A population-level study, Japan, 2015-2018.

Shinya Tsuzuki, Nobuaki Matsunaga, Koji Yahara, Keigo Shibayama, Motoyuki Sugai, Norio Ohmagari

International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases 108 119-124 2021年7月

Genomic differentiation within East Asian Helicobacter pylori

Yuanhai You, Kaisa Thorell, Lihua He, Koji Yahara, Yoshio Yamaoka, Jeong-Heon Cha, Kazunari Murakami, Yukako Katsura, Ichizo Kobayashi, Daniel Falush …

2021年6月5日

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