Using the very high frequency (46.5 MHz) middle and upper atmosphere radar (MUR), Ka band (35 GHz) and X band (9.8 GHz) weather radars, a Kelvin-Helmholtz (KH) instability occurring at a cloud base and its impact on modulating cloud bottom altitudes are described by a case study on 8 October 2008 at the Shigaraki MU Observatory, Japan (34.85 degrees N, 136.10 degrees E). KH braids were monitored by the MUR along the slope of a cloud base gradually rising with time around an altitude of similar to 5.0 km. The KH braids had a horizontal wavelength of about 3.6 km and maximum crest-to-trough amplitude of about 1.6 km. Nearly monochromatic and out of phase vertical air motion oscillations exceeding +/- 3 m s(-1) with a period of similar to 3 min 20 s were measured by the MUR above and below the cloud base. The axes of the billows were at right angles of the wind and wind shear both oriented east-north-east at their altitude. The isotropy of the radar echoes and the large variance of Doppler velocity in the KH billows (including the braids) indicate the presence of strong turbulence at the Bragg (similar to 3.2 m) scale. After the passage of the cloud system, the KH waves rapidly damped and the vertical scale of the KH braids progressively decreased down to about 100 m before their disappearance. The radar observations suggest that the interface between clear air and cloud was conducive to the presence of the dynamical shear instability by reducing static stability (and then the Richardson number) near the cloud base. Downward cloudy protuberances detected by the Ka band radar had vertical and horizontal scales of about 0.6-1.1 and 3.2 km, respectively, and were clearly associated with the downward air motions. Observed oscillations of the reflectivity-weighted Doppler velocity measured by the X band radar indicate that falling ice particles underwent the vertical wind motions generated by the KH instability to form the protuberances. The protuberances at the cloud base might be either KH billow clouds or perhaps some sort of mamma. Reflectivity-weighted particle fall velocity computed from Doppler velocities measured by the X band radar and the MUR showed an average value of 1.3 ms(-1) within the cloud and in the protuberance environment.