論文

査読有り 責任著者
2008年8月

The RRM domain of poly(A)-specific ribonuclease has a noncanonical binding site for mRNA cap analog recognition

NUCLEIC ACIDS RESEARCH
  • Takashi Nagata
  • Sakura Suzuki
  • Ryuta Endo
  • Mikako Shirouzu
  • Takaho Terada
  • Makoto Inoue
  • Takanori Kigawa
  • Naohiro Kobayashi
  • Peter Guntert
  • Akiko Tanaka
  • Yoshihide Hayashizaki
  • Yutaka Muto
  • Shigeyuki Yokoyama
  • 全て表示

36
14
開始ページ
4754
終了ページ
4767
記述言語
英語
掲載種別
研究論文(学術雑誌)
DOI
10.1093/nar/gkn458
出版者・発行元
OXFORD UNIV PRESS

The degradation of the poly(A) tail is crucial for posttranscriptional gene regulation and for quality control of mRNA. Poly(A)-specific ribonuclease (PARN) is one of the major mammalian 3 specific exo-ribonucleases involved in the degradation of the mRNA poly(A) tail, and it is also involved in the regulation of translation in early embryonic development. The interaction between PARN and the m(7)GpppG cap of mRNA plays a key role in stimulating the rate of deadenylation. Here we report the solution structures of the cap-binding domain of mouse PARN with and without the m(7)GpppG cap analog. The structure of the cap-binding domain adopts the RNA recognition motif (RRM) with a characteristic -helical extension at its C-terminus, which covers the -sheet surface (hereafter referred to as PARN RRM). In the complex structure of PARN RRM with the cap analog, the base of the N(7)-methyl guanosine (m(7)G) of the cap analog stacks with the solvent-exposed aromatic side chain of the distinctive tryptophan residue 468, located at the C-terminal end of the second -strand. These unique structural features in PARN RRM reveal a novel cap-binding mode, which is distinct from the nucleotide recognition mode of the canonical RRM domains.

リンク情報
DOI
https://doi.org/10.1093/nar/gkn458
Web of Science
https://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=JSTA_CEL&SrcApp=J_Gate_JST&DestLinkType=FullRecord&KeyUT=WOS:000258330900030&DestApp=WOS_CPL
ID情報
  • DOI : 10.1093/nar/gkn458
  • ISSN : 0305-1048
  • Web of Science ID : WOS:000258330900030

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