仲隆 (Takashi Naka) - マイポータル

基本情報

所属: 九州産業大学理工学部情報科学科教授

学位: 工学修士(筑波大学)
工学博士(筑波大学)

J-GLOBAL ID: 200901023617415176
researchmap会員ID: 1000125886

研究キーワード

研究分野

学歴

論文

The partition representation of enzymatic reaction networks and its application for searching bi-stable reaction systems

Takashi Naka, Ivan Kryven

PLOS ONE 2022年1月26日
Stability Analysis for the Cellular Signaling Systems Composed of Two Phosphorylation-Dephosphorylation Cyclic Reactions.

Chinasa Sueyoshi, Takashi Naka

Computational Molecular Bioscience 7 33-45 2017年8月査読有り
Exhaustive analysis for the effects of a feedback regulation on the bi-stability in cellular signaling systems

Chinasa Sueyoshi, Takashi Naka

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 10404 159-173 2017年査読有り
Silence on the relevant literature and errors in implementation

Philippe Bastiaens, Marc R Birtwistle, Nils Blüthgen, Frank J Bruggeman, Kwang-Hyun Cho, Carlo Cosentino, Alberto de la Fuente, Jan B Hoek, Anatoly Kiyatkin, Steffen Klamt …

Nature Biotechnology 33(4) 336-339 2015年4月
Epidermal growth factor receptor mutation in combination with expression of MIG6 alters gefitinib sensitivity

Yoshimi Naruo, Takeshi Nagashima, Ryoko Ushikoshi-Nakayama, Yuko Saeki, Takashi Nakakuki, Takashi Naka, Hiroshi Tanaka, Shih-Feng Tsai, Mariko Okada-Hatakeyama

BMC SYSTEMS BIOLOGY 5(29) 2011年2月査読有り
Stochastic Aspects of Kinase Cascade Pathways in Cellular Signaling

Takashi Naka

Proceedings of ICCSA2010 ( International Conferences on Computational Science and Its Applications 2010) 300-302 2010年3月査読有り
Simulation analysis of lateral propagation mechanism of EGF signaling on cell surface

Takashi Naka

PROCEEDINGS OF THE 2009 INTERNATIONAL CONFERENCE OF COMPUTATIONAL SCIENCES AND ITS APPLICATIONS 183-188 2009年査読有り
Effect of the EGF binding cooperativity on EGFR activation on the cell surface.

Takashi Naka

Porc. of GIW2008 - The 19th International Conference on Genome Informatics 2 pages on CD-ROM 2008年12月査読有り
Topological Analysis of MAPK Cascade for Kinetic ErbB Signaling

Takashi Nakakuki, Noriko Yumoto, Takashi Naka, Mikako Shirouzu, Shigeyuki Yokoyama, Mariko Hatakeyama

PLOS ONE 3(3) e1782 2008年3月査読有り
Compensation effect of the MAPK cascade on formation of phospho-protein gradients

T Naka, M Hatakeyama, N Sakamoto, A Konagaya

BIOSYSTEMS 83(2-3) 167-177 2006年2月査読有り
OBIYagns: a grid-based biochemical simulator with a parameter estimator

S Kimura, T Kawasaki, M Hatakeyama, T Naka, F Konishi, A Konagaya

BIOINFORMATICS 20(10) 1646-1648 2004年7月査読有り
Parameter estimation for the simulation of biochemical pathways

S Kimura, M Hatakeyama, T Kawasaki, T Naka, A Konagaya

Proceedings of the Fifteenth IASTED International Conference on Modelling and Simulation 266-271 2004年査読有り
OBIYagns: A Biochemical Simulator in Grid Environment

Shuhei Kimura, Takuji Kawasaki, Mariko Hatakeyama, Takashi Naka, Fumikazu Konishi, Akihiko Konagaya

Genome Informatics 14 (Proceedings of GIW2003 -The 14th International Conference on Genome Informatics) 14 621-622 2003年12月査読有り
A computational model on the modulation of mitogen-activated protein kinase (MAPK) and Akt pathways in heregulin-induced ErbB signalling

M Hatakeyama, S Kimura, T Naka, T Kawasaki, N Yumoto, M Ichikawa, JH Kim, K Saito, M Saeki, M Shirouzu …

BIOCHEMICAL JOURNAL 373 451-463 2003年7月査読有り
Development of Biochemical System Simulator with Parameter Estimator

Takuji Kawasaki, Shuhei Kimura, Mariko Hatakeyama, Takashi Naka, Akihiko Konagaya

Genome Informatics 13 (Proceedings of GIW2002 -The 13th International Conference on Genome Informatics) 13 463-464 2002年12月査読有り
A Mathematical Modeling of Signal Transduction Cascade on Raf-Akt Cross-Talk

Mariko Hatakeyama, Shuhei Kimura, Noriko Yumoto, Mio Ichikawa, Takuji Kawasaki, Takashi Naka, Akihiko Konagaya

Genome Informatics 13 (Proceedings of GIW2002 -The 13th International Conference on Genome Informatics) 13 359-360 2002年12月査読有り
Simulation analysis of the effects of the simultaneous release of quanta of acetylcholine on the endplate current at the neuromuscular junction

T Naka, N Sakamoto

MATHEMATICS AND COMPUTERS IN SIMULATION 59(1-3) 87-94 2002年5月査読有り
Two-domensional compartment model for generation of miniature endplate current at the neuromascular junction

Takashi Naka, Naoto Sakamoto

Comments on Theoretical Biology 6 1-28 2001年3月査読有り招待有り
Simulation analysis of the effects of quantum size of acetylcholine on generation of endplate current at the neuromuscular junction.

Takashi Naka, Naoto Sakamoto

Proc. of the 16th IMACS World Congress on Scientific Computation, Applied Mathematics and Simulation 6 pages on CD-ROM 2000年査読有り
Localization effects of acetylcholine release from a synaptic vesicle at the neuromuscular junction

T Naka, N Sakamoto

BIOSYSTEMS 51(2) 73-78 1999年8月査読有り

もっとみる

講演・口頭発表等

Validity of quasi-steady-state approximation for a Michaelis-Menten-type reaction in regulatory reaction networks

仲隆

The 20th International Conference on Systems Biology (ICSB2019) 2019年11月招待有り
細胞内シグナル伝達系の制御ネットワークによる定式化とそれを用いた制御特性の解析

仲隆

SICE分子ロボティクス研究会・JST第4回分子ロボット倫理研究会合同研究会 2018年1月招待有り
Systematic model construction and simulation analysis for regulatory networks in cellular signal transduction systems.

Takashi Naka

The 25nd international conference on genome informatics (GIW2014) 2014年12月
The effect of enzyme saturation level and Damkoehler number on cellular signaling speed in kinase cascades.

Takashi Naka

The 23nd international conference on genome informatics (GIW2012) 2012年12月
Stochastic aspects of cellular signaling dynamics in kinase cascades.

Takashi Naka

The 22nd international conference on genome informatics (GIW2011) 2011年12月
Dynamics of MAPK cascade in a double spherical configuration of cell space

Takashi Naka, Naoto Sakamoto, Mariko Hatakeyama

4th European Conference on Computational Biology 2005 (ECCB05) 2005年9月
Dynamic analysis of ErbB signal transduction pathways.

Mariko Hatakeyama, Yoshiki Yamaguchi, Shuhei Kimura, Takashi Naka, Atsushi Suenaga, Makoto Taiji, Akihiko Konagaya

Nature Biotechnology Winter Symposia; Signal Transduction in Cancer 2005年2月
Compensation effect of MAPK cascade on formation of phospho-protein gradient.

Takashi Naka, Mariko Hatakeyama, Naoto Sakamoto, Akihiko Konagaya

5th International Conference on Systems Biology (ICSB2004) (Heidelberg, 2004, October) 2004年10月
Development of a Model System for the Essential Mechanisms in Cellular Signaling.

Takashi Naka, Mariko Hatakeyama, Naoto Sakamoto, Akihiko Konagaya

SIAM Symposium on Computational Models and Simulation for Intra-Cellular Processes 2002年10月
Parameter Estimation of Signal Transduction Pathways using Real-Coded Genetic Algorithms.

Shuhei Kimura, Takashi Naka, Mariko Hatakeyama, Akihiko Konagaya

ISMB2001 (The 9th International Conference on Intelligent Systems for Molecular Biology) 2001年7月
Formulation of the estimation methods for the kinetic parameters in cellular dynamics using object-oriented database.

Takashi Naka, Mariko Hatakeyama, Mio Ichikawa, Naoto Sakamoto, Akihiko Konagaya

ISMB2001 (The 9th International Conference on Intelligent Systems for Molecular Biology) 2001年7月
Simulation analysis of the effects of the junctional folds on spontaneous generation of the miniature endplate current at neuromuscular junction.

Takashi Naka

IMACS Symposium on Mathematical Modelling 1997年2月
Characterization of transverse and radial diffusion system of acetylcholine in the synaptic cleft at neuromuscular junction.

Naoto Sakamoto, Takashi Naka

First East Asian Symposium on Biophysics 1994年5月

仲隆

基本情報

研究キーワード

研究分野

学歴

論文

講演・口頭発表等

所属学協会

共同研究・競争的資金等の研究課題

メニュー

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