Neval Yilmaz - My portal

Profile Information

Affiliation: WPI-NanoLSI, Kanazawa University

Degree: Ph.D.(Mar, 2007, Tohoku University)

J-GLOBAL ID: 201801014232871007
researchmap Member ID: B000322645

Research Interests

Research Areas

Research History

Jan, 2021 - Present

Assistant Professor, WPI-NanoLSI, Kanazawa University
Jul, 2017 - Dec, 2020

Research Scientist, Biomacromolecules Research Team, RIKEN
Oct, 2010 - Mar, 2016

Postdoctoral Researcher, Surface Chemistry Laboratory & Lipid Biology Laboratory, RIKEN
Apr, 2007 - Sep, 2010

Postdoctoral Researcher, Department of Nano Science and Technology, Kumamoto University

Education

Oct, 2003 - Mar, 2007

Ph.D., Department of Applied Chemistry, Tohoku University
2001 - 2003

M.Sc., Department of Chemical Engineering, Ege University
1997 - 2001

B.Sc., Department of Chemical Engineering, Ege University

Awards

Mar, 2016

7th Research Incentive Award (RIKEN)

Papers

Assembly Dynamics and Structure of An Aegerolysin, Ostreolysin A6

Neval Yilmaz, Anastasija Panevska, Nario Tomishige, Ludovic Richert, Yves Mély, Kristina Sepčić, Peter Greimel, Toshihide Kobayashi

JOURNAL OF BIOLOGICAL CHEMISTRY, 299(8) 104940-104940, Jun 19, 2023 Peer-reviewedLead authorCorresponding author
An Oomycete NLP Cytolysin Forms Transient Small Pores in Lipid Membranes

Katja Pirc, Luke A. Clifton, Neval Yilmaz, Andrea Saltalamacchia, Mojca Mally, Tina Snoj, Nada Žnidaršič, Marija Srnko, Jure Borišek, Petteri Parkkila …

SCIENCE ADVANCES, 8(10), Mar 11, 2022 Peer-reviewed
Lipid Membrane Interaction of Peptide/DNA Complexes Designed for Gene Delivery

Neval Yilmaz, Yutaka Kodama, Keiji Numata

LANGMUIR, 37(5) 1882-1893, Feb 9, 2021 Peer-reviewedLead author
Zwitterionic Polypeptides: Chemoenzymatic Synthesis and Loosening Function for Cellulose Crystals

Kousuke Tsuchiya, Neval Yilmaz, Takaaki Miyamoto, Hiroyasu Masunaga, Keiji Numata

BIOMACROMOLECULES, 21(5) 1785-1794, May 11, 2020 Peer-reviewed
Revealing the Architecture of the Cell Wall in Living Plant Cells by Bioimaging and Enzymatic Degradation

Neval Yilmaz, Yutaka Kodama, Keiji Numata

BIOMACROMOLECULES, 21(1) 95-103, Jan 13, 2020 Peer-reviewedLead author
Molecular Mechanisms of Action of Sphingomyelin-Specific Pore-Forming Toxin, Lysenin

Neval Yilmaz, Akiko Yamaji-Hasegawa, Françoise Hullin-Matsuda, Toshihide Kobayashi

SEMINARS IN CELL AND DEVELOPMENTAL BIOLOGY, 73 188-198, Jan 1, 2018 Peer-reviewedInvitedLead authorCorresponding author
Crystal Structure of An Invertebrate Cytolysin Pore Reveals Unique Properties and Mechanism of Assembly

Marjetka Podobnik, Peter Savory, Nejc Rojko, Matic Kisovec, Neil Wood, Richard Hambley, Jonathan Pugh, E. Jayne Wallace, Luke McNeill, Mark Bruce …

NATURE COMMUNICATIONS, 7 11598, May, 2016 Peer-reviewed
Assemblies of Pore-Forming Toxins Visualized by Atomic Force Microscopy

Neval Yilmaz, Toshihide Kobayashi

BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES, 1858(3) 500-511, Mar, 2016 Peer-reviewedInvitedLead author
Visualization of Lipid Membrane Reorganization Induced by A Pore-Forming Toxin Using High-Speed Atomic Force Microscopy

Neval Yilmaz, Toshihide Kobayashi

ACS NANO, 9(8) 7960-7967, Aug, 2015 Peer-reviewedLead author
Visualization of the Heterogeneous Membrane Distribution of Sphingomyelin Associated with Cytokinesis, Cell Polarity, and Sphingolipidosis

Asami Makino, Mitsuhiro Abe, Motohide Murate, Takehiko Inaba, Neval Yilmaz, Francoise Hullin-Matsuda, Takuma Kishimoto, Nicole L. Schieber, Tomohiko Taguchi, Hiroyuki Arai …

FASEB JOURNAL, 29(2) 477-493, Feb, 2015 Peer-reviewed
Real-Time Visualization of Assembling of A Sphingomyelin-Specific Toxin on Planar Lipid Membranes

Neval Yilmaz, Taro Yamada, Peter Greimel, Takayuki Uchihashi, Toshio Ando, Toshihide Kobayashi

BIOPHYSICAL JOURNAL, 105(6) 1397-1405, Sep 17, 2013 Peer-reviewedLead author
Construction and Characterization of Molecular Nonwoven Fabrics Consisting of Cross-Linked Poly(γ-methyl-L-glutamate)

Rintaro Higuchi, Megumi Hirano, Md. Ashaduzzaman, Neval Yilmaz, Tatsunori Sumino, Daisuke Kodama, Sayuri Chiba, Shinobu Uemura, Katsuhiko Nishiyama, Akihiro Ohira …

LANGMUIR, 29(24) 7478-7487, Jan 7, 2013 Peer-reviewed
Molecular Dynamics in Two-Dimensional Supramolecular Systems Observed by STM

Shinobu Uemura, Ryota Tanoue, Neval Yilmaz, Akihiro Ohira, Masashi Kunitake

MATERIALS, 3(8) 4252-4276, Aug, 2010 Peer-reviewed
Electrical Conductivities of Nanosheets Studied by Conductive Atomic Force Microscopy

Neval Yilmaz, Shintaro Ida, Yasumichi Matsumoto

MATERIALS CHEMISTRY AND PHYSICS, 116(1) 62-66, Jul, 2009 Peer-reviewedLead authorCorresponding author
Molecular Macrocluster Formation on Silica Surfaces in Phenol-Cyclohexane Mixtures

Neval Yilmaz, Masashi Mizukami, Kazue Kurihara

LANGMUIR, 23(11) 6070-6075, May 22, 2007 Peer-reviewedLead author
Removal of Phenol Using TDTAB- and HDTAB-Bentonites

N. Yilmaz, H. Yilmaz, S. Yapar

ENERGY SOURCES PART A-RECOVERY UTILIZATION AND ENVIRONMENTAL EFFECTS, 29(1) 67-77, Jan, 2007 Peer-reviewedLead author
Adsorption Properties of Tetradecyl- and Hexadecyl Trimethylammonium Bentonites

N. Yilmaz, S. Yapar

APPLIED CLAY SCIENCE, 27(3-4) 223-228, Dec, 2004 Peer-reviewedLead author

Misc.

生体膜ダイナミクスと脂質細胞質分裂、極性形成、スフィンゴ脂質蓄積症におけるスフィンゴミエリンの不均一な膜分布の可視化

牧野麻美, 阿部充宏, 村手源英, 稲葉岳彦, Neval Yilmaz, Hullin-Matsuda Francoise, 岸本拓磨, 田口友彦, 新井洋由, 小林俊秀

日本生化学会大会・日本分子生物学会年会合同大会講演要旨集, 88回・38回 [2W11-p, Dec, 2015
異なったスフィンゴミエリンの分布状態の可視化

牧野麻美, 阿部充宏, 村手源英, 稲葉岳彦, NEVAL Yilmaz, 小林俊秀

日本細胞生物学会大会要旨集, 67th 166-166, Jun 5, 2015
Assembling of A Pore-Forming Toxin on A Model Membrane

Neval Yilmaz, Taro Yamada, Peter Greimel, Takayuki Uchihashi, Toshio Ando, Toshihide Kobayashi

BIOPHYSICAL JOURNAL, 106(2) 97A-97A, Jan, 2014
Real-Time Visualization of A Pore-Forming Toxin Assembling on A Model Membrane

Neval Yilmaz, Taro Yamada, Takayuki Uchihashi, Toshio Ando, Toshihide Kobayashi

BIOPHYSICAL JOURNAL, 104(2) 360A-360A, Jan, 2013
Macroclusters of Phenol Adsorbed on Silica in Cyclohexane Induced by Surface Silanol Groups

Neval Yilmaz, Masashi Mizukami, Kazue Kurihara

POLYMER PREPRINTS, JAPAN, 55(2) 3443, 2006
Formation of Stable Nano-Films on Mica Surface Using Methacrylate Surfactants

Neval Yilmaz, Paul Fitzgerald, Masashi Mizukami, Greg Warr, Kazue Kurihara

POLYMER PREPRINTS, JAPAN, 55(2) 3474, 2006

Presentations

Assembly of Proteins into Oligomeric Structures on Lipid Membranes, Leading to Cell Death or Survival

MBSJ2022, WPI Joint Symposium for Interdisciplinary Life Sciences, Japan, Dec 2, 2022 Invited
Interaction of Peptide/DNA Complexes with Model Lipid Membranes

69th Symposium on Macromolecules, Japan, Sep, 2020
Visualization of Living Plant Cell Wall at High Spatiotemporal Resolution

61st JSPP Annual Meeting, Japan, Mar, 2020
AFM Visualization of Cellulose Fibrils in Live Plant Cell Wall

67th SPSJ Annual Meeting, Japan, May, 2018
Pore Forming Toxin Assemblies Visualized by High Speed AFM

60th Annual Meeting of Biophysical Society, USA, Feb, 2016
Dynamics of Pore-Forming Toxins During Their Assembling on Lipid Membranes

The 53rd Annual Meeting of the Biophysical Society of Japan, Sep, 2015 Invited
Phase Merging Induced by Sphingomyelin-Binding Toxin

RIKEN Symposium: Imaging Cellular Structure and Dynamics, Japan, Jul, 2015 Invited
Visualization of Lipid Membrane Reorganization Induced by A Pore-Forming Toxin Using High-Speed Atomic Force Microscopy

JCBL, Japan, May, 2015
Assembling of Lysenin on Sphingomyelin-Containing Membranes

Pore-Forming Toxins (PFT2014): A Meeting in Memory of Gianfranco Menestrina, Italy, Aug, 2014
Visualization of Assembling of PFTs on Planar Lipid Membranes

Department of Biology, University of Ljubljana, Slovenia, Aug, 2014 Invited
Assembling of A Pore-Forming Toxin on A Model Membrane

58th Annual Meeting of Biophysical Society, USA, Feb, 2014
Real Time Observation of Assembling of A Sphingomyelin-Specific Toxin by High-Speed Atomic Force Microscopy

The 14th International Membrane Research Forum, Japan, Mar, 2013
Honeycomb Formation of A Pore Forming Toxin on Model Membrane

3rd Kanazawa Bio-AFM Workshop, Japan, Nov, 2012
Visualization of Lysenin Oligomerization on Lipid Bilayer by High-Speed AFM

IACIS 2012, Japan, May, 2012
Revealing the Sphingomyelin-Lysenin Interaction Using Sum Frequency Generation

ISSS-6, Japan, Dec, 2011
An SFG Study of A Sphingomyelin Monolayer in the Presence of A Toxic Protein

ECOSS28, Poland, Aug, 2011
Visualization of CTAB-Dependent Interfacial Assembly of Ferritin

NCSS 2010, Japan, Sep, 2010
Characterization of Ferritin-CTAB Complex Using In-Situ AFM

ACEC 2010, Japan, May, 2010
Nano-Sized Aggregates of Ferritin-CTAB Complex

11th Pacific Polymer Conference, Australia, Dec, 2009
In-Situ AFM Observation of Ferritin-CTAB Aggregates at the Solid/Liquid Interface

Joint Symposium on High Polymers (14th) and Fibers (12th), Japan, Oct, 2009

Research Projects

Elucidation of Cholesterol Effect on Membrane Biophysical Properties and MET Dimerization Using AFM Techniques

WPI-NanoLSI Grant for Transdisciplinary Research Promotion, Jun, 2023 - Mar, 2024
Elucidation of Cholesterol Effect on MET Dimerization at Single Protein Level by Atomic Force Microscopy and Scanning Electric Potential Microscopy

WPI-NanoLSI Grant for Transdisciplinary Research Promotion, Jun, 2022 - Mar, 2023