Masahito Ohue

J-GLOBAL         Last updated: Nov 21, 2018 at 12:05
 
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Name
Masahito Ohue
E-mail
ohuec.titech.ac.jp
URL
http://goo.gl/Y4LG1
Affiliation
Tokyo Institute of Technology
Section
Graduate School of Information Science and Engineering
Research funding number
50743209
ORCID ID
0000-0002-0120-1643

Research Areas

 
 

Academic & Professional Experience

 
Apr 2016
 - 
Today
Assistant Professor, School of Computing, Tokyo Institute of Technology
 
Apr 2016
 - 
Today
Advanced Computational Drug Discovery Unit, Institute of Innovative Research, Tokyo Institute of Technology
 
Apr 2015
 - 
Mar 2016
Assistant Professor, Graduate School of Information Science and Engineering, Tokyo Institute of Technology
 
Apr 2014
 - 
Mar 2015
JSPS Research Fellow PD
 
Apr 2014
 - 
Mar 2015
Tokyo Institute of Technology Research Fellow
 

Education

 
Apr 2011
 - 
Mar 2014
Dept. of Computer Sci., Doctor's course, Grad. School of Info. Sci. and Eng., Tokyo Institute of Technology
 
Apr 2009
 - 
Mar 2011
Dept. of Computer Sci., Master's course, Grad. School of Info. Sci. and Eng., Tokyo Institute of Technology
 
Apr 2007
 - 
Mar 2009
Dept. of Computer Sci., Fac. of Engineering, Tokyo Institute of Technology
 
Apr 2002
 - 
Mar 2007
Dept. of Electronics and Information Eng., Ishikawa National College of Technology
 

Awards & Honors

 
Sep 2018
Early Career Presentation Award, Biophysical Society of Japan
 
Aug 2018
Tokyo Tech Challenging Research Award, Tokyo Institute of Technology
 
Mar 2018
Funai Research Award for Young Scientist, The Funai Foundation for Information Technology (FFIT)
 
Feb 2015
Tejima Memorial Research Award
 
Feb 2014
Fourth (FY2013) JSPS Ikushi Prize, Japan Society for the Promotion of Science
 

Published Papers

 
Masahiro Mochizuki, Shogo D. Suzuki, Keisuke Yanagisawa, Masahito Ohue, Yutaka Akiyama
Molecular Diversity      Jan 2019   [Refereed]
Daisuke Kami, Tomoya Kitani, Akihiro Nakamura, Naoki Wakui, Rena Mizutani, Masahito Ohue, Fuyuki Kametani, Nobuyoshi Akimitsu, Satoshi Gojo
PLoS ONE   13(10) e0203708   Oct 2018   [Refereed]
Shogo D. Suzuki, Masahito Ohue, Yutaka Akiyama
Artificial Life and Robotics   23(2) 205-212   Jun 2018   [Refereed]
Keisuke Yanagisawa, Shunta Komine, Rikuto Kubota, Masahito Ohue, Yutaka Akiyama
Computational Biology and Chemistry   74 399-406   Jun 2018   [Refereed]
Tomohiro Ban, Masahito Ohue, Yutaka Akiyama
Computational Biology and Chemistry   73 139-146   Apr 2018   [Refereed]
Takanori Hayashi, Yuri Matsuzaki, Keisuke Yanagisawa, Masahito Ohue, Yutaka Akiyama
BMC Bioinformatics   19(Suppl 4) 62   Mar 2018   [Refereed]
Naoki Wakui, Ryunosuke Yoshino, Nobuaki Yasuo, Masahito Ohue, Masakazu Sekijima
Journal of Molecular Graphics and Modelling   79 166-174   Jan 2018   [Refereed]
Masahito Keisuke Yanagisawa, Shunta Komine, Shogo D. Suzuki, Masahito Ohue, Takashi Ishida, Yutaka AkiyamaOhue
Bioinformatics   33(23) 3836-3843   Dec 2017   [Refereed]
Learning-to-rank based compound virtual screening by using pairwise kernel with multiple heterogeneous experimental data
Shogo D. Suzuki, Masahito Ohue, Yutaka Akiyama
Proceedings of 22nd International Symposium on Artificial Life and Robotics (AROB 22nd 2017)   114-119   2017   [Refereed]
Masahito Ohue, Takuro Yamazaki, Tomohiro Ban, Yutaka Akiyama
Proceedings of the Thirteenth International Conference On Intelligent Computing (ICIC2017)   10362 549-558   2017   [Refereed]

Research Grants & Projects

 
Technology of a medium-scale peptide-protein interaction analysis
JSPS: Grant-in-Aid for Young Scientists (B)
Project Year: Apr 2015 - Mar 2018    Investigator(s): Masahito Ohue
Technology of a medium-scale peptide-protein interaction analysis
JSPS: Grant-in-Aid for Scientific Research (C)
Project Year: Apr 2015 - Mar 2018    Investigator(s): Nobuyuki Uchikoga
Parallel Computing System for Drug Target Discovery based on Protein-Protein Interaction Predictions
JSPS: Grant-in-Aid for JSPS Fellows
Project Year: Apr 2014 - Mar 2015    Investigator(s): Masahito Ohue
An all-to-all protein-protein interaction prediction system with tertiary structure information
JSPS: Grant-in-Aid for JSPS Fellows
Project Year: Apr 2011 - Mar 2014    Investigator(s): Masahito Ohue

Conference Activities & Talks

 
Highly precise protein-protein interaction prediction by integrating template-based and template-free protein docking
Masahito Ohue, Yuri Matsuzaki, Takehiro Shimoda, Takashi Ishida, Yutaka Akiyama
The 2013 Annual Conference of the Japanese Society for Bioinformatics (JSBi2013)   Nov 2013   
The MEGADOCK project: Ultra-high-performance protein-protein interaction prediction tools on supercomputing environments
Takehiro Shimoda, Masahito Ohue, Yuri Matsuzaki, Takayuki Fujiwara, Nobuyuki Uchikoga, Takashi Ishida, Yutaka Akiyama
ACM Conference on Bioinformatics, Computatioal Biology and Biomedical Informatics (ACM-BCB2013)   Sep 2013   
MEGADOCK-GPU: Acceleration of Protein-Protein Docking Calculation on GPUs
Takehiro Shimoda, Takashi Ishida, Shuji Suzuki, Masahito Ohue, Yutaka Akiyama
ACM Conference on Bioinformatics, Computational Biology and Biomedicine 2013 (ACM-BCB 2013), 2nd International Workshop on Parallel and Cloud-based Bioinformatics and Biomedicine (ParBio2013)   Sep 2013   
Highly Precise Protein-Protein Interaction Prediction Based on Consensus Between Template-Based and de Novo Docking Methods
Masahito Ohue, Yuri Matsuzaki, Takehiro Shimoda, Takashi Ishida, Yutaka Akiyama
Great Lakes Bioinformatics Conference 2013   May 2013   
Protein-protein interaction prediction based on rigid-body docking with ultra-high-performance computing technique: applications to affinity prediction on CAPRI round 21 and interactome analyses
Masahito Ohue, Yuri Matsuzaki, Nobuyuki Uchikoga, Kohei Yamamoto, Takayuki Fujiwara, Takehiro Shimoda, Toshiyuki Sato, Takashi Ishida, Yutaka Akiyama
CAPRI 2013 5th Evaluation Meeting   Apr 2013