Shinya Oki

J-GLOBAL         Last updated: Apr 5, 2019 at 20:44
 
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Name
Shinya Oki
E-mail
sokidev.med.kyushu-u.ac.jp
Affiliation
Kyushu University
Section
Department of developmental Biology, Graduate School of Medical Sciences
Job title
Associate Professor
Degree
Ph.D in Medicine(Osaka university)
Research funding number
90452713
ORCID ID
0000-0002-4767-3259

Research Interests

 
 

Research Areas

 
 

Published Papers

 
Marina Lizio, Imad Abugessaisa, Shuhei Noguchi, Atsushi Kondo, Akira Hasegawa, Chung Chau Hon, Michiel de~Hoon, Jessica Severin, Shinya Oki, Yoshihide Hayashizaki, Piero Carninci, Takeya Kasukawa, Hideya Kawaji
Nucleic Acids Research   47(D1) D752-D758   Jan 2019   [Refereed]
Mochizuki K, Hayashi Y, Sekinaka T, Otsuka K, Ito-Matsuoka Y, Kobayashi H, Oki S, Takehara A, Kono T, Osumi N, Matsui Y.
Cell Reports   24(10) 2682-2693.e6   Sep 2018   [Refereed]
Anan K, Hino S, Shimizu N, Sakamoto A, Nagaoka K, Takase R, Kohrogi K, Araki H, Hino Y, Usuki S, Oki S, Tanaka H, Nakamura K, Endo F, Nakao M
Nucleic acids research   46(11) 5441-5454   Jun 2018   [Refereed]
Shinya Oki*, Tazro Ohta, Go Shioi, Hideki Hatanaka, Osamu Ogasawara, Yoshihiro Okuda, Hideya Kawaji, Ryo Nakaki, Jun Sese & Chikara Meno*
bioRxiv      Feb 2018

Conference Activities & Talks

 
Towards Understanding “INDIVIDUALITY”
Shinya Oki
Towards Understanding “INDIVIDUALITY”   24 Jul 2018   
The transcription factor landscape decodes the enhancers and risk variants in non-coding regions
Shinya Oki, Tazro Ohta, Go Shioi, Hideki Hatanaka, Osamu Ogasawara, Yoshihiro Okuda, Hideya Kawaji, Ryo Nakaki, Jun Sese, Chikara Meno
Keystone Symposium; Epigenetics and Human Disease: Progress from Mechanisms to Therapeutics   30 Jan 2017   
Comprehensive and integrative database and analysis of published ChIP-seq data [Invited]
沖 真弥
横浜理研セミナー   11 Apr 2016   
ChIP-Atlas: Comprehensive and integrative database for visualizing and mining all published ChIP-seq data.
Shinya Oki, Tazro Ohta, Go Shioi, Ryo Nakaki, Osamu Ogasawara, Yoshihiro Okuda, Hideki Hatanaka, Chikara Meno
SYSTEMS BIOLOGY: GLOBAL REGULATION OF GENE EXPRESSION   17 Mar 2016   
Comprehensive database for visualizing all published ChIP-seq data
沖 真弥, 大田 達郎, 塩井 剛, 仲木 竜, 目野 主税
48th Annual Meeting of JSDB   2 Jun 2015   
How to visualize published ChIP-seq raw data. [Invited]
沖 真弥
CDB seminar   23 Jul 2014   
SraTailor: GUI software for visualizing high-throughput sequence read archives
沖 真弥
47th Annual Meeting for the Japanese Society of Developmental Biologists   27 May 2014   
Development of a Mac GUI Application to Visualize Published Raw ChIP-seq data
沖 真弥, 目野 主税
The 61st NIBB Conference Cellular Community in Mammalian Embryogenesis   10 Jul 2013   
Sulfated glycosaminoglycans are required for gastrulation, cell fate decision, and left-right axis formation in mouse embryo
Shinya Oki, Keiko Kitajima, Hiroshi Hamada, and Chikara Meno
5th Global COE International Symposium   24 Feb 2010   

Works

 
Shinya Oki   Web Service   Dec 2015
An integrative and comprehensive database for visualizing and making use of public ChIP-seq data.