Rice plants are relatively insensitive to low boron environment. We examined the role of boron stored in seeds in growth of rice seedlings in regard to its insensitivity to low boron condition. In experiments using seeds without the removal of the endosperm, the effect of low boron treatments (0.18 and 0.03 μM B) was not evident on growth of seedlings until 5 weeks from germination. Analysis of boron distribution among different organs in rice grain demonstrated that the endosperm contained 92% of total boron in brown rice and husks contained twice as much boron as the brown rice. To examine the role of boron stored in the endosperm, endosperm were removed 5 days after de-husking and imbibition and the plants were subjected to boron treatments. The growth of the plants without endosperm was much reduced after 10 days under the 0.03 μM boron compared with the plants grown with the normal level (18 μM B). With the normal level of boron supply, the growth did not differ between the plants with and without endosperm, suggesting that growth difference between seedlings with and without endosperm under low B condition is not due to lack of starch or proteins, but due to lack of boron stored in seeds. Tracer experiments confirmed that a substantial amount of B was supplied from the seed to the seedling and that B limitation increased the B supply from seeds to seedlings, especially to roots. Our results established that boron stored in seeds, principally in the endosperm, contributes significantly to the growth of rice seedlings when external boron supply is limited. © 2010 Springer Science+Business Media B.V.