論文

査読有り 国際誌
2021年12月7日

Raman Molecular Fingerprints of SARS-CoV-2 British Variant and the Concept of Raman Barcode.

Advanced science (Weinheim, Baden-Wurttemberg, Germany)
  • Giuseppe Pezzotti
  • Francesco Boschetto
  • Eriko Ohgitani
  • Yuki Fujita
  • Masaharu Shin-Ya
  • Tetsuya Adachi
  • Toshiro Yamamoto
  • Narisato Kanamura
  • Elia Marin
  • Wenliang Zhu
  • Ichiro Nishimura
  • Osam Mazda
  • 全て表示

9
3
開始ページ
e2103287
終了ページ
記述言語
英語
掲載種別
研究論文(学術雑誌)
DOI
10.1002/advs.202103287
出版者・発行元
WILEY

The multiple mutations of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus have created variants with structural differences in both their spike and nucleocapsid proteins. While the functional relevance of these mutations is under continuous scrutiny, current findings have documented their detrimental impact in terms of affinity with host receptors, antibody resistance, and diagnostic sensitivity. Raman spectra collected on two British variant sub-types found in Japan (QK002 and QHN001) are compared with that of the original Japanese isolate (JPN/TY/WK-521), and found bold vibrational differences. These included: i) fractions of sulfur-containing amino acid rotamers, ii) hydrophobic interactions of tyrosine phenol ring, iii) apparent fractions of RNA purines and pyrimidines, and iv) protein secondary structures. Building upon molecular scale results and their statistical validations, the authors propose to represent virus variants with a barcode specially tailored on Raman spectrum. Raman spectroscopy enables fast identification of virus variants, while the Raman barcode facilitates electronic recordkeeping and translates molecular characteristics into information rapidly accessible by users.

リンク情報
DOI
https://doi.org/10.1002/advs.202103287
PubMed
https://www.ncbi.nlm.nih.gov/pubmed/34877818
PubMed Central
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8787433
Web of Science
https://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=JSTA_CEL&SrcApp=J_Gate_JST&DestLinkType=FullRecord&KeyUT=WOS:000727801900001&DestApp=WOS_CPL
ID情報
  • DOI : 10.1002/advs.202103287
  • eISSN : 2198-3844
  • PubMed ID : 34877818
  • PubMed Central 記事ID : PMC8787433
  • Web of Science ID : WOS:000727801900001

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