J-GLOBAL         Last updated: Nov 9, 2017 at 09:01
Kyushu University
Faculty of Mathematics, Department of Mathematical Science, Computational Mathematical Science
Job title
Associate Professor
Dr. Sci(Kyushu University)

Research Areas


Academic & Professional Experience

Apr 2007
Kyushu University
University of Tokyo, Research Associate


Graduate School, Division of Integrated Science and Engineering, Kyushu University
Physics, Faculty of Science, Kyushu University

Published Papers

Kobiki S, Maruyama O
Journal of bioinformatics and computational biology   12(6) 1442004   Dec 2014   [Refereed]
Yong CH, Maruyama O, Wong L
BMC systems biology   8 Suppl 5 S3   2014   [Refereed]
Ruan P, Hayashida M, Maruyama O, Akutsu T
BMC bioinformatics   15 Suppl 2 S6   2014   [Refereed]
Maruyama O
BMC bioinformatics   14 347   Dec 2013   [Refereed]
Taniguchi Y, Yamada Y, Maruyama O, Kuhara S, Ikeda D
Journal of bioinformatics and computational biology   11 1343002   Dec 2013   [Refereed]
Tatsuke D, Maruyama O
Gene   518 152-158   Apr 2013   [Refereed]
Widita CK, Maruyama O
BMC systems biology   7 Suppl 6 S14   2013   [Refereed]
Maruyama O, Chihara A
Proteome science   9 Suppl 1 S14   Oct 2011   [Refereed]
Yasukochi Y, Maruyama O, Mahajan MC, Padden C, Euskirchen GM, Schulz V, Hirakawa H, Kuhara S, Pan XH, Newburger PE, Snyder M, Weissman SM
Proceedings of the National Academy of Sciences of the United States of America   107 3704-3709   Feb 2010   [Refereed]
Reconstructing phylogenetic trees of prokaryote genomes by randomly sampling oligopeptides.
Maruyama O, Matsuda A, Kuhara S
International journal of bioinformatics research and applications   1 429-446   2005   [Refereed]
Shinozaki D, Akutsu T, Maruyama O
Bioinformatics (Oxford, England)   19 Suppl 2 ii206-14   Oct 2003   [Refereed]
Extensive feature detection of N-terminal protein sorting signals.
Bannai H, Tamada Y, Maruyama O, Nakai K, Miyano S
Bioinformatics (Oxford, England)   18 298-305   Feb 2002   [Refereed]


Graph inference from a walk for trees of bounded degree 3 is NP-complete
Proceedings of the 20th International Conference on mathematical Foundations of Computer Science (Lecture Notes in Computer Science969), Springer-Verlag   969, 257-266    1995
Thero-retical Computer Science   161, 289-300    1996
Taking a walk on a graph
Mathe-matica Japonica   43, 595-606    1996
Extracting best con-sensus motifs from positive and negative examples
Proceedings of the 13th Symposium on Theoretical Aspects of Computer Science (Lecture Notes in Computer Science 1046), Springer-Verlag   1046, 219-230    1996
Identification of gene regulatory networks by strategic gene disruptions and gene overexpressions
Proceedings of the 9th Annual ACM-SIAM Symposium of Discrete Algorithms, ACM Press   , 695-702    1998

Books etc

Bioinformatics - sequence data analysis and structural prediction (in Japanese)
Asakura   2007   ISBN:978-4-254-12784-3

Research Grants & Projects

Development of knowledge discovery system from databases
Grant-in-Aid for Scientific Research
Knowledge discovery from genomic databases.
Grant-in-Aid for Scientific Research