OKAMURA, Kohji

J-GLOBAL         Last updated: Oct 8, 2019 at 16:25
 
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Name
OKAMURA, Kohji
URL
http://epigenetics.nrichd.ncchd.go.jp/
Affiliation
National Research Institute for Child Health and Development
Section
Division of Tissue Regeneration, Department of Systems Biomedicine
Job title
Division chief
Degree
Master of Science(Tohoku University), Ph.D.(The University of Tokyo)
Research funding number
80456194
Twitter ID
DrOkamuraLab
ORCID ID
0000-0001-9747-5069

Research Areas

 
 

Academic & Professional Experience

 
2012
 - 
Today
Division chief, Department of Systems BioMedicine, National Center for Child Health and Development
 
2015
 - 
2018
Visiting researcher, Graduate School of Medicine, Kyoto University
 
2012
 - 
2013
Part-time lecturer, School of Social Sciences, Waseda University
 
2011
 - 
2013
Part-time lectuler, Graduate School of Comprehensive Human Sciences, Tsukuba University
 
2010
 - 
2012
Lecturer, Center for Informational Biology, Ochanomizu University
 
2007
 - 
2009
Laboratory of Functional Analysis in Silico, Human Genome Centre, Institute of Medical Science, University of Tokyo (Supervisor: Dr. Kenta Nakai)
 
2007
 - 
2009
Institute of Medical Science, University of Tokyo
 
2004
 - 
2007
Program in Genetics and Genome Biology, The Hospital for Sick Children, Toronto (Supervisor: Dr. Stephen W. Scherer)
 
2004
 - 
2007
Research fellow, SickKids, UofT
 
1998
 - 
2004
Laboratory of Functional Genomics, Human Genome Centre, Institute of Medical Science, University of Tokyo (Supervisors: Dr. Takashi Ito and Dr. Yoshiyuki Sakaki)
 

Education

 
Apr 1999
 - 
Mar 2003
Department of Molecular Cell Biology, Graduate School of Medicine, University of Tokyo
 
Apr 1994
 - 
Mar 1996
Department of Chemistry, Graduate School of Science, Tohoku University
 
Apr 1990
 - 
Mar 1994
Department of Chemistry, Faculty of Science, Tohoku University
 

Awards & Honors

 
Dec 2011
Profiling ascidian promoters as the primordial type of vertebrate promoter, Best Paper Award (InCob 2011), Asia Pacific Bioinformatics Network
Winner: Kohji Okamura
 

Published Papers

 
Osumi T, Watanabe A, Okamura K, Nakabayashi K, Yoshida M, Tsujimoto SI, Uchiyama M, Takahashi H, Tomizawa D, Hata K, Kiyokawa N, Kato M
Genes Chromosomes Cancer   58(11) 820-823   Nov 2019   [Refereed]
Aoto S, Katagiri S, Wang Y, Pagnamenta AT, Sakamoto-Abutani R, Toyoda M, Umezawa A, Okamura K
Stem Cell Res. Ther.   10(273)    Aug 2019   [Refereed]
Narumi-Kishimoto Y, Araki N, Migita O, Kawai T, Okamura K, Nakabayashi K, Kaname T, Ozawa Y, Ozawa H, Takada F, Hata K
Eur. J. Med. Genet.   62(9) 103547   Sep 2019   [Refereed]
Ohki K, Kiyokawa N, Saito Y, Hirabayashi S, Nakabayashi K, Ichikawa H, Momozawa Y, Okamura K, Yoshimi A, Ogata-Kawata H, Sakamoto H, Kato M, Fukushima K, Hasegawa D, Fukushima H, Imai M, Kajiwara R, Koike T, Komori I, Matsui A, Mori M, Moriwaki K, Noguchi Y, Park MJ, Ueda T, Yamamoto S, Matsuda K, Yoshida T, Matsumoto K, Hata K, Kubo M, Matsubara Y, Takahashi H, Fukushima T, Hayashi Y, Koh K, Manabe A, Ohara A
Haematologica      Aug 2018   [Refereed]
Osumi T, Tsujimoto SI, Tamura M, Uchiyama M, Nakabayashi K, Okamura K, Yoshida M, Tomizawa D, Watanabe A, Takahashi H, Hori T, Yamamoto S, Hamamoto K, Migita M, Ogata-Kawata H, Uchiyama T, Kizawa H, Ueno-Yokohata H, Shirai R, Seki M, Ohki K, Takita J, Inukai T, Ogawa S, Kitamura T, Matsumoto K, Hata K, Kiyokawa N, Goyama S, Kato M
Cancer Res.   78(16) 4452-4458   Aug 2018   [Refereed]
Okuno M, Ayabe T, Yokota I, Musha I, Shiga K, Kikuchi T, Kikuchi N, Ohtake A, Nakamura A, Nakabayashi K, Okamura K, Momozawa Y, Kubo M, Suzuki J, Urakami T, Kawamura T, Amemiya S, Ogata T, Sugihara S, Fukami M, Japanese Study Group of Insulin Therapy for Childhood and Adolescent Diabetes.
Diabet. Med.   35(3) 376-380   Mar 2018   [Refereed]
Katoh-Fukui Y, Yatsuga S, Shima H, Hattori A, Nakamura A, Okamura K, Yanagi K, Iso M, Kaname T, Matsubara Y, Fukami M
Hum. Genome Var.   5(18006)    Mar 2018   [Refereed]
Murakami M, Yoshimoto T, Nakabayashi K, Nakano Y, Fukaishi T, Tsuchiya K, Minami I, Bouchi R, Okamura K, Fujii Y, Hashimoto K, Hata KI, Kihara K, Ogawa Y
Endocr. Relat. Cancer   24(10) 531-541   Oct 2017   [Refereed]
Kajiwara K, Tanemoto T, Wada S, Karibe J, Ihara N, Ikemoto Y, Kawasaki T, Oishi Y, Samura O, Okamura K, Takada S, Akutsu H, Sago H, Okamoto A, Umezawa A
Stem Cell Reports   8(6) 1701-1713   Jun 2017   [Refereed]
Kagami M, Matsubara K, Nakabayashi K, Nakamura A, Sano S, Okamura K, Hata K, Fukami M, Ogata T
Genet. Med.   19(4) 476-482   Apr 2017   [Refereed]
Hirabayashi S, Ohki K, Nakabayashi K, Ichikawa H, Momozawa Y, Okamura K, Yaguchi A, Terada K, Saito Y, Yoshimi A, Ogata-Kawata H, Sakamoto H, Kato M, Fujimura J, Hino M, Kinoshita A, Kakuda H, Kurosawa H, Kato K, Kajiwara R, Moriwaki K, Morimoto T, Nakamura K, Noguchi Y, Osumi T, Sakashita K, Takita J, Yuza Y, Matsuda K, Yoshida T, Matsumoto K, Hata K, Kubo M, Matsubara Y, Fukushima T, Koh K, Manabe A, Ohara A, Kiyokawa N, Tokyo Children’s Cancer Study Group (TCCSG).
Haematologica   102(1) 118-129   Jan 2017   [Refereed]
Steward O, Matsudaira Yee K, Farris S, Pirbhoy PS, Worley P, Okamura K, Okuno H, Bito H
Front. Mol. Neurosci.   10 435   Jan 2018   [Refereed]
Sakaki M, Ebihara Y, Okamura K, Nakabayashi K, Igarashi A, Matsumoto K, Hata K, Kobayashi Y, Maehara K
PLOS ONE   12(2) e0171431   2017   [Refereed]
Akutsu H, Nasu M, Morinaga S, Motoyama T, Homma N, Machida M, Yamazaki-Inoue M, Okamura K, Nakabayashi K, Takada S, Nakamura N, Kanzaki S, Hata K, Umezawa A
Regen. Ther.   5 31-39   Dec 2016   [Refereed]
Morita S, Noguchi H, Horii T, Nakabayashi K, Kimura M, Okamura K, Sakai A, Nakashima H, Hata K, Nakashima K, Hatada I
Nat. Biotechnol.   34(10) 1060-1065   Oct 2016   [Refereed]
Nakamura A, Hamaguchi E, Horikawa R, Nishimura Y, Matsubara K, Sano S, Nagasaki K, Matsubara Y, Umezawa A, Tajima T, Ogata T, Kagami M, Okamura K, Fukami M
J. Clin. Endocrinol. Metab.   101(7) 2623-2627   Jul 2016   [Refereed]
Higasa K, Miyake N, Yoshimura J, Okamura K, Niihori T, Saitsu H, Doi K, Shimizu M, Nakabayashi K, Aoki Y, Tsurusaki Y, Morishita S, Kawaguchi T, Migita O, Nakayama K, Nakashima M, Mitsui J, Narahara M, Hayashi K, Funayama R, Yamaguchi D, Ishiura H, Ko WY, Hata K, Nagashima T, Yamada R, Matsubara Y, Umezawa A, Tsuji S, Matsumoto N, Matsuda F
J. Hum. Genet.   61(6) 547-553   Jun 2016   [Refereed]
Okamura K, Sakaguchi H, Sakamoto-Abutani R, Nakanishi M, Nishimura K, Yamazaki-Inoue M, Ohtaka M, Periasamy VS, Alshatwi AA, Higuchi A, Hanaoka K, Nakabayashi K, Takada S, Hata K, Toyoda M, Umezawa A
Sci. Rep.   6 26342   May 2016   [Refereed]
Hayashi K, Kawai YL, Yura K, Yoshida MA, Ogura A, Hata K, Nakabayashi K, Okamura K
Mitochondrial DNA   27(3) 1842-1843   May 2016   [Refereed]
Okamura K, Kawai T, Hata K, Nakabayashi K
Genom. Data   7 67-69   Mar 2016   [Refereed]
Shima H, Yatsuga S, Nakamura A, Sano S, Sasaki T, Katsumata N, Suzuki E, Hata K, Nakabayashi K, Momozawa Y, Kubo M, Okamura K, Kure S, Matsubara Y, Ogata T, Narumi S, Fukami M
Sex. Dev.   10(4) 205-209   2016   [Refereed]
Okamura K, Toyoda M, Hata K, Nakabayashi K, Umezawa A
Genom. Data   6 4-6   Dec 2015   [Refereed]
Kawai T, Yamada T, Abe K, Okamura K, Kamura H, Akaishi R, Minakami H, Nakabayashi K, Hata K
Sci. Rep.   5 14224   Sep 2015   [Refereed]
Yokoyama T, Miura F, Araki H, Okamura K, Ito T
BMC Genomics   16 594   Aug 2015   [Refereed]
Miyata K, Miyata T, Nakabayashi K, Okamura K, Naito M, Kawai T, Takada S, Kato K, Miyamoto S, Hata K, Asahara H
Hum. Mol. Genet.   24(2) 410-423   Jan 2015   [Refereed]
Miyata T, Sonoda K, Tomikawa J, Tayama C, Okamura K, Maehara K, Kobayashi H, Wake N, Kato K, Hata K, Nakabayashi K
Sarcoma   2015 412068   2015   [Refereed]
Kawai YL, Yura K, Shindo M, Kusakabe R, Hayashi K, Hata K, Nakabayashi K, Okamura K
Mitochondrial DNA   26(6) 863-864   2015   [Refereed]
Fukawatase Y, Toyoda M, Okamura K, Nakamura K, Nakabayashi K, Takada S, Yamazaki-Inoue M, Masuda A, Nasu M, Hata K, Hanaoka K, Higuchi A, Takubo K, Umezawa A
Sci. Rep.   4 5421   Jun 2014   [Refereed]
Migita O, Maehara K, Kamura H, Miyakoshi K, Tanaka M, Morokuma S, Fukushima K, Shimamoto T, Saito S, Sago H, Nishihama K, Abe K, Nakabayashi K, Umezawa A, Okamura K, Hata K
J. Hum. Genet.   59(6) 326-331   Jun 2014   [Refereed]
Court F, Tayama C, Romanelli V, Martin-Trujillo A, Iglesias-Platas I, Okamura K, Sugahara N, Simón C, Moore H, Harness JV, Keirstead H, Sanchez-Mut JV, Kaneki E, Lapunzina P, Soejima H, Wake N, Esteller M, Ogata T, Hata K, Nakabayashi K, Monk D
Genome Res.   24(4) 554-569   Apr 2014   [Refereed]
Kusakabe R, Tani S, Nishitsuji K, Shindo M, Okamura K, Miyamoto Y, Nakai K, Suzuki Y, Kusakabe TG, Inoue K
Gene Expr. Patterns   13(1-2) 43-50   Jan 2013   [Refereed]
Okamura K, Yamashita R, Takimoto N, Nishitsuji K, Suzuki Y, Kusakabe TG, Nakai K
BMC Genomics   12 Suppl 3 S7   Nov 2011   [Refereed]
Khare P, Mortimer SI, Cleto CL, Okamura K, Suzuki Y, Kusakabe T, Nakai K, Meedel TH, Hastings KE
Nucleic Acids Res.   39(7) 2638-2648   Apr 2011   [Refereed]
Okamura K, Matsumoto KA, Nakai K
BMC Bioinformatics   11 Suppl 7 S2   Oct 2010   [Refereed]
Okamura K, Nakai K
Mol. Biol. Evol.   25(6) 1231-1238   Jun 2008   [Refereed]
Okamura K, Wintle RF, Scherer SW
Genome Biol.   9(11) R160   Nov 2008   [Refereed]
Okamura K, Wei J, Scherer SW
BMC Genomics   8 160   Jun 2007   [Refereed]
Okamura K, Feuk L, Marquès-Bonet T, Navarro A, Scherer SW
Genomics   88(6) 690-697   Dec 2006   [Refereed]
Redon R, Ishikawa S, Fitch KR, Feuk L, Perry GH, Andrews TD, Fiegler H, Shapero MH, Carson AR, Chen W, Cho EK, Dallaire S, Freeman JL, González JR, Gratacòs M, Huang J, Kalaitzopoulos D, Komura D, MacDonald JR, Marshall CR, Mei R, Montgomery L, Nishimura K, Okamura K, Shen F, Somerville MJ, Tchinda J, Valsesia A, Woodwark C, Yang F, Zhang J, Zerjal T, Zhang J, Armengol L, Conrad DF, Estivill X, Tyler-Smith C, Carter NP, Aburatani H, Lee C, Jones KW, Scherer SW, Hurles ME
Nature   444(7118) 444-454   Nov 2006   [Refereed]
Yamada Y, Shirakawa T, Taylor TD, Okamura K, Soejima H, Uchiyama M, Iwasaka T, Mukai T, Muramoto K, Sakaki Y, Ito T
DNA Seq.   17(4) 300-306   Aug 2006   [Refereed]
Okamura K, Ito T
Cytogenet. Genome Res.   113(1-4) 159-164   2006   [Refereed]
Okamura K, Sakaki Y, Ito T
Biochem. Biophys. Res. Commun.   329(3) 824-830   Apr 2005   [Refereed]
Okamura K, Yamada Y, Sakaki Y, Ito T
DNA Res.   11(6) 381-390   Dec 2004   [Refereed]
Okamura K, Hagiwara-Takeuchi Y, Li T, Vu TH, Hirai M, Hattori M, Sakaki Y, Hoffman AR, Ito T
Genome Res.   10(12) 1878-1889   Dec 2000   [Refereed]
Yamakado H, Okamura K, Ohshimo K, Kishimoto N, Ohno K
Chem. Lett.   26(3) 269-270   Mar 1997   [Refereed]
Sato C, Kikuchi K, Okamura K, Takahashi Y, Miyashi T
J. Phys. Chem.   99(46) 16925-16931   Nov 1995   [Refereed]
Ohno K, Okamura K, Yamakado H, Hoshino S, Takami T, Yamauchi M
J. Phys. Chem.   99(39) 14247-14253   Sep 1995   [Refereed]

Books etc

 
Understanding deep learning by a glimpse of a future genome database
OKAMURA K
Medical Do   Jul 2019   ISBN:978-4-909508-02-7
Handbook of Human Molecular Evolution
Okamura K, Scherer SW (Part:Contributor, The contribution of frameshift translation to the generation of novel human proteins)
Wiley   Aug 2008   
What is DNA?
OKAMURA K
Nikka Times   Dec 2004   

Patents

 
特開平11-224220 : Memory management
Hideaki Sanpei and Kohji Okamura