Takuji Tsukiyama

Profile Information

Affiliation: Assistant Professor, Faculty of Agriculture Department of Agricultural Science, Kindai University

Degree: (BLANK)(Kyoto University)

J-GLOBAL ID: 200901019200837194
researchmap Member ID: 1000327221

Research Interests

Research Areas

Research History

Apr, 2019 - Present

講師, タキイ研究農場付属園芸専門学校
Apr, 2018 - Present

Kibi International University
Apr, 2016 - Present

Faculty of Agriculture, Kindai University
Apr, 2007 - Mar, 2016

助教, 農学研究科, 京都大学大学院
Nov, 2005 - Mar, 2007

助手, 農学研究科, 京都大学大学院

Education

Apr, 2001 - Mar, 2005

農学専攻博士課程, 農学研究科, 京都大学大学院
Apr, 1999 - Mar, 2001

農学専攻修士課程, 農学研究科, 京都大学大学院
- 2001

Graduate School, Division of Agriculture, Kyoto University
Apr, 1994 - Mar, 1998

Faculty of Agriculture, Kindai University
- 1998

Faculty of Agriculture, Kinki University

Committee Memberships

Jan, 2017 - Present

組換えDNA実験安全委員会外部学識経験者委員, ナント種苗株式会社
Apr, 2020 - Mar, 2022

代議員, 日本育種学会
Apr, 2016 - Mar, 2020

運営委員（集会）, 日本育種学会
Apr, 2014 - Mar, 2016

幹事, 日本育種学会
Apr, 2010 - Mar, 2012

幹事, 日本育種学会
Apr, 2008 - Mar, 2010

常任幹事, 日本育種学会

Papers

The medaka fish Tol2 transposable element is in an early stage of decay: identification of a nonautonomous copy

Sakura Hayashi, Takuji Tsukiyama, Atsuo Iida, Masato Kinoshita, Akihiko Koga

Genome, 65(3) 183-187, Mar, 2022 Peer-reviewed
Evaluation of diamide sensitivity in rice (Oryza sativa L.)

Syusei Tahara, Yuichiro Yoshinaka, Eiji Tanesaka, Takuji Tsukiyama

J. Crop Res., 66 7-11, Oct, 2021 Peer-reviewedCorresponding author
Allelic Differentiation at the E1/Ghd7 Locus Has Allowed Expansion of Rice Cultivation Area.

Hiroki Saito, Yutaka Okumoto, Takuji Tsukiyama, Chong Xu, Masayoshi Teraishi, Takatoshi Tanisaka

Plants (Basel, Switzerland), 8(12), Nov 28, 2019 Peer-reviewed
Allelic Differentiation at the E1/Ghd7 Locus Has Allowed Expansion of Rice Cultivation Area

Hiroki, Saito, Yutaka Okumoto,, Takuji Tsukiyama,, Chong Xu,, Masayoshi Teraishi and Takatoshi Tanisaka

Plants, 8 550, Nov 28, 2019 Peer-reviewed
明日の育種学を考える

谷坂隆俊, 築山拓司, 西尾剛, 矢野昌裕, 小林麻子, 加屋隆士, 坂本理沙, 齋藤希, 矢部志央理

育種学研究, 21(2) 157-168, Nov 11, 2019 Peer-reviewedInvited
Compatibility of three bacterial strains in Agrobacterium-mediated transformation of monokaryotic mycelia of Flammulina velutipes.

Tanesaka Eiji, Mori Misuzu, Tsuji Kenya, Tsukiyama Takuji

J. Crop Res., 63 31-33, Dec, 2018 Peer-reviewed
QTL analysis of VGI (Vigorously growing plant in IM294) mutants related traits in rice

Chong Xu, Takuji Tsukiyama, Masayoshi Teraishi, Takatoshi Tanisaka, Yutaka Okumoto

Journal of Crop Research, 63(1) 15-19, Nov, 2018 Peer-reviewed
Lineage-specific gene acquisition or loss is involved in interspecific hybrid sterility in rice

Yohei Koide, Atsushi Ogino, Takanori Yoshikawa, Yuki Kitashima, Nozomi Saito, Yoshitaka Kanaoka, Kazumitsu Onishi, Yoshihiro Yoshitake, Takuji Tsukiyama, Hiroki Saito …

Proceedings of the National Academy of Sciences of the United States of America, 115(9) E1995-E1962, Feb 27, 2018 Peer-reviewed
The active MITE mPing produces transcriptional variants post-transcriptionally in the rice genome

Kum Rise, Tsukiyama Takuji, Inagaki Haruka, Saito Hiroki, Teraishi Masayoshi, Okumoto Yutaka, Tanisaka Takatoshi

GENES & GENETIC SYSTEMS, 90(6) 408, Dec, 2015 Peer-reviewed
The effects of ubiquitin-related modifier gene Rurm1 on the oxidative stress response induced by methylviologen in rice

Kawanishi Megumi, Tsukiyama Takuji, Teraishi Masayoshi, Okumoto Yutaka, Tanisaka Takatoshi

Journal of Crop Research, 60(1) 55-57, Nov, 2015 Peer-reviewed
The active miniature inverted-repeat transposable element mPing posttranscriptionally produces new transcriptional variants in the rice genome

Rise Kum, Takuji Tsukiyama, Haruka Inagaki, Hiroki Saito, Masayoshi Teraishi, Yutaka Okumoto, Takatoshi Tanisaka

MOLECULAR BREEDING, 35(8) 159, Aug, 2015 Peer-reviewed
The effects of phytochrome-mediated light signals on the developmental acquisition of photoperiod sensitivity in rice

Yoshihiro Yoshitake, Takayuki Yokoo, Hiroki Saito, Takuji Tsukiyama, Xu Quan, Kazunori Zikihara, Hitomi Katsura, Satoru Tokutomi, Takako Aboshi, Naoki Mori …

SCIENTIFIC REPORTS, 5 7709, Jan, 2015 Peer-reviewed
Wide genetic variation in phenolic compound content of seed coats among black soybean cultivars

Siviengkhek Phommalath, Masayoshi Teraishi, Takanori Yoshikawa, Hiroki Saito, Takuji Tsukiyama, Tetsuya Nakazaki, Takatoshi Tanisaka, Yutaka Okumoto

BREEDING SCIENCE, 64(4) 409-415, Dec, 2014 Peer-reviewed
Early Embryogenesis-Specific Expression of the Rice Transposon Ping Enhances Amplification of the MITE mPing

Shota Teramoto, Takuji Tsukiyama, Yutaka Okumoto, Takatoshi Tanisaka

PLOS GENETICS, 10(6) e1004396, Jun, 2014 Peer-reviewed
The effects of the photoperiod-insensitive alleles, se13, hd1 and ghd7, on yield components in rice

Quan Xu, Hiroki Saito, Ikuo Hirose, Keisuke Katsura, Yoshihiro Yoshitake, Takayuki Yokoo, Takuji Tsukiyama, Masayoshi Teraishi, Takatoshi Tanisaka, Yutaka Okumoto

MOLECULAR BREEDING, 33(4) 813-819, Apr, 2014 Peer-reviewed
Se14, Encoding a JmjC Domain-Containing Protein, Plays Key Roles in Long-Day Suppression of Rice Flowering through the Demethylation of H3K4me3 of RFT1

Takayuki Yokoo, Hiroki Saito, Yoshihiro Yoshitake, Quan Xu, Takehito Asami, Takuji Tsukiyama, Masayoshi Teraishi, Yutaka Okumoto, Takatoshi Tanisaka

PLOS ONE, 9(4) e96064, Apr, 2014 Peer-reviewed
Induced mutations will help mold the future of food

Tsukiyama T, Saito H, Naito K, Teraishi M, Monden Y, Tanisaka T

Gamma Field Symposia, 50 1-19, Mar, 2014
Loss-of-function of a ubiquitin-related modifier promotes the mobilization of the active MITE mPing

Tsukiyama Takuji, Teramoto Shota, Yasuda Kanako, Horibata Akira, Mori Nanako, Okumoto Yutaka, Teraishi Masayoshi, Saito Hiroki, Tanisaka Takatoshi

GENES & GENETIC SYSTEMS, 88(6) 358, Dec, 2013 Peer-reviewed
Utilization of transposable element mPing as a novel genetic tool for modification of the stress response in rice

Kanako Yasuda, Makoto Ito, Tomohiko Sugita, Takuji Tsukiyama, Hiroki Saito, Ken Naito, Masayoshi Teraishi, Takatoshi Tanisaka, Yutaka Okumoto

MOLECULAR BREEDING, 32(3) 505-516, Oct, 2013 Peer-reviewed
Mobilization of the active transposon mPing in interspecific hybrid rice between Oryza sativa and O. glaberrima

Kanako Yasuda, Takuji Tsukiyama, Shanta Karki, Yutaka Okumoto, Masayoshi Teraishi, Hiroki Saito, Takatoshi Tanisaka

Euphytica, 192(1) 17-24, Jul, 2013 Peer-reviewed

Misc.

イネ雑種不稔遺伝子S1の中立対立遺伝子作出と原因遺伝子の特定

小出陽平, 荻野篤史, 吉川貴徳, 吉川貴徳, 北嶋ゆき, 齋藤希, 金岡義高, 大西一光, 吉竹良洋, 築山拓司 …

育種学研究, 20 41, Sep 22, 2018
Development of a high-throughput method for examining the intra-genic recombination frequency in Wx locus in rice using an image analysis

上野山亜楠, 小出陽平, 小出陽平, 小出陽平, 築山拓司, 築山拓司, 寺石政義, 奥本裕

作物研究, (61) 45‐49, Nov 25, 2016
不感光性早生突然変異系統X61における晩生突然変異遺伝子ef7による感光性の復帰

齊藤大樹, SIDDIKA Ayesha, MUSTAFA Kamal, 吉竹良洋, 横尾敬行, 伏見栄利奈, 築山拓司, 寺石政義, 奥本裕

育種学研究, 18 59, Sep 24, 2016
DNAメチル化がイネ自律性転移因子Pingの結合能におよぼす効果

築山拓司, 小野原一暢, 田中幹也, 齊藤大樹, 奥本裕, 寺石政義, 井上國世, 井上國世, 谷坂隆俊, 谷坂隆俊

育種学研究, 18 91, Mar 21, 2016
ダイズサポニン含量を制御する新たなQTL

寺石政義, 東条由花, 山田直弘, 築山拓司, 奥本裕

育種学研究, 18 116, Mar 21, 2016
重イオンビーム照射によるイネ生殖隔離障壁打破への取り組み

小出陽平, 小出陽平, 築山拓司, 寺石政義, 奥本裕, 阿部知子

変異創成によるグリーンイノベーションの未来-花・食・エネルギー理研シンポジウム仁科加速器研究センター応用研究開発室品種改良ユーザー会報告書2015 平成28年, 2, 2016
イネ非自律性転移因子mPingは選択スプライシングを誘発する

琴梨世, 築山拓司, 稲垣晴香, 齊藤大樹, 寺石政義, 奥本裕, 谷坂隆俊, 谷坂隆俊

日本遺伝学会大会プログラム・予稿集, 87th 106, Sep 10, 2015
Transposon-mediated mutagenesis and its application to plant breeding

Kanazawa Akira, Fukai Eigo, Miyao Akio, Saze Hidetoshi, Tsukiyama Takuji

Breeding Research, 17(2) 77-87, 2015
Estimation of the Distribution Pattern of Grains and Branches in Rice Panicle

Kikuzawa Kyoko, Imamura Yumi, Toda Daichi, Saito Hiroki, Yokoo Takayuki, Yoshitake Yoshihiro, Tsukiyama Takuji, Teraishi Masayoshi, Okumoto Yutaka

Journal of Crop Research, 60 27-30, 2015
低酸素緩和および吸水緩和がダイズ発芽時冠水耐性QTLに及ぼす影響

NISHIDA MASAHIRO, SHIRAI RINA, TERAISHI MASAYOSHI, TSUKIYAMA TAKUJI, OKUMOTO YUTAKA

育種学研究, 16 155, Sep 26, 2014
イネトランスポゾンmPingの転移活性を制御する因子の探索

TERAMOTO SHOTA, TSUKIYAMA TAKUJI, TANISAKA TAKATOSHI, OKUMOTO YUTAKA

育種学研究, 16 239, Sep 26, 2014
イネ非自律性転移因子mPingによる転写産物の改変

KUM R, TSUKIYAMA TAKUJI, INAGAKI HARUKA, TANISAKA TAKATOSHI, OKUMOTO YUTAKA

育種学研究, 16 129, Mar 21, 2014
突然変異に食の未来を託す

築山拓司, 齊藤大樹, 内藤健, 寺石政義, 門田有希, 谷坂隆俊

Gamma field symposia, (50) 1-18, Mar, 2014
イネRURM1によるtRNAの硫黄修飾を介したタンパク質翻訳効率の制御

HAMAMOTO YUKI, TSUKIYAMA TAKUJI, SHIMIZU AKIFUMI, TERAISHI MASAYOSHI, TANISAKA TAKATOSHI, OKUMOTO YUTAKA

育種学研究, 15 77, Oct 12, 2013
イネ転移因子mPing挿入(STAmP)データベースの活用

YASUDA KANAKO, TSUKIYAMA TAKUJI, SAITO HIROKI, NAITO KEN, TERAISHI MASAYOSHI, TANISAKA TAKATOSHI, OKUMOTO YUTAKA

育種学研究, 15 108, Oct 12, 2013
イネ品種銀坊主におけるmPing移転は時期・組織特異的なPingの発現上昇を伴う

TERAMOTO SHOTA, TSUKIYAMA TAKUJI, TERAISHI MASAYOSHI, TANISAKA TAKATOSHI, OKUMOTO YUTAKA

育種学研究, 15 76, Oct 12, 2013
ダイズ高イソフラボン変異体に関するQTL解析

ISHII RYUSUKE, TERAISHI MASAYOSHI, TERAI MASAKAZU, KOSAKA HIDEKI, TODA TOSHIYA, YOSHIKAWA TAKANORI, TSUKIYAMA TAKUJI, SAITO HIROKI, TANISAKA TAKATOSHI, OKUMOTO YUTAKA

育種学研究, 15 115, Oct 12, 2013
ダイズの新規開花期QTLと冠水抵抗性QTLとの密接連鎖

SHIRAI RINA, SAKURAI HIROKI, TERAISHI MASAYOSHI, SEKI KOSUKE, YAMADA NAOHIRO, TSUKIYAMA TAKUJI, OKUMOTO YUTAKA

育種学研究, 15 98, Oct 12, 2013
イネユビキチン様タンパク質の機能喪失は活性型MITE・mPingの転移を促進する

TSUKIYAMA TAKUJI, TERAMOTO SHOTA, YASUDA KANAKO, HORIBATA AKIRA, MORI NANAKO, OKUMOTO YUTAKA, TERAISHI MASAYOSHI, SAITO HIROKI, TANISAKA TAKATOSHI

日本遺伝学会大会プログラム・予稿集, 85th 92, Aug 31, 2013
イネの成長・生育におけるABA応答性キチナーゼCHT11の役割

URAMARU KIMITAKE, TSUKIYAMA TAKUJI, INOUE KUNIYO, TERAISHI MASAYOSHI, NAKAZAKI TETSUYA, TANISAKA TAKATOSHI, OKUMOTO YUTAKA

育種学研究, 15 91, Mar 27, 2013

Books and Other Publications

初めての酵素化学

築山拓司 (Role: Contributor, 第7章酵素の遺伝子工学／第9章酵素の作用ーキチナーゼー)

シーエムシー出版, Dec, 2016

Presentations

Transposon-mediated alternative splicing in the rice genome

Tsukiyama T, Kum R, Inagaki H, Saito H, Teraishi M, Okumoto Y, Tanisaka T

International Symposium"Establishing Next-Generation Genetics", 2015
Utilization of active MITE mPing as a novel genetic tool for modification of stress response in rice

Yasuda K, Tsukiyama T, Saito H, Naito K, Teraishi M, Tanisaka T, Okumoto Y

7th International Rice Genetic Symposium, Nov 6, 2013 Invited
Loss-of-function of an ubiquitin-related modifier RURM1 promotes the mobilization of the active MITE mPing

Tsukiyama T, Teramoto S, Yasuda K, Horibata A, Mori N, Okumoto Y, Teraishi M, Saito H, Onishi A, Tamura K, Tanisaka T

7th International Rice Genetic Symposium, Nov 6, 2013
Gene expression analysis and characterization of rice (Oryza sativa L.) class II chitinase CHT11

Tsukiyama T, Inouye K, Kosonh X, Okumoto Y, Nakazaki T, Tanisaka T

International Symposium on Frontier in Plant Proteome Research -Contribution of proteomics technology in creation of useful plants-, 2008
Differential expression of 11 PR-3 chitinase genes in rice (Oryza sativa L.) plants during rice blast infection and signal molecule treatments

Tsukiyama T

The 6th Kyoto University International Symposium “Plant sciences in Japan and China -from genetics to breeding”, 2005
Different roles of PR-3 chitinase isozymes in rice

Tsukiyama T, Okumoto Y, Inouye K, Terachi T, Tanaka C, Nakazaki T, Tanisaka T

5th International Rice Genetics Symposium and 3rd International Rice Functional Genomics Symposium, 2005
Biological functions of PR-3 chitinase isozymes in rice (Oryza sativa L.)

TSUKIYAMA TakujiTsukiyama T, Inouye K, Nakazaki T, Terachi T, Tanaka C, Mikami B, Okumoto Y, Tanisaka T

World Rice Research Conference 2004, 2004

Teaching Experience

Professional Memberships

Research Projects

比較ゲノミクスから探る育種モデル食用菌の生殖成長相転換機構の全容解明

科学研究費助成事業, 基盤研究(C), 日本学術振興会, Apr, 2021 - Mar, 2024

種坂英次, 築山拓司, 白澤健太
転移因子の活性を制御するエピゲノムリプログラミング機構の解明

科学研究費補助金(基盤研究(C)), 日本学術振興会, Apr, 2021 - Mar, 2024

築山拓司, 吉川貴徳, 谷坂隆俊
転移因子による選択的スプライシングを制御るスプライシング暗号の解明（継続）

研究開発助成, 公益財団法人 G-7奨学財団, Apr, 2022 - Mar, 2023
転移因子による選択的スプライシングを制御るスプライシング暗号の解明（継続）

研究開発助成, 公益財団法人 G-7奨学財団, Apr, 2021 - Mar, 2022

築山拓司
コーヒー抽出残渣での栽培に適したヒラタケ属きのこの品種開発とその廃菌床の農業利用

研究助成（一般）, 一般社団法人ヤンマー資源循環支援機構, Apr, 2021 - Mar, 2022

築山拓司
転移因子による選択的スプライシングを制御するスプライシング暗号の解明

研究開発助成, 公益財団法人 G-7奨学財団, Apr, 2020 - Mar, 2021

築山拓司
Elucidation of a host defense mechanism acquired by the evolutionary arms race between genome and transposable elements

Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (C), Grant-in-Aid for Scientific Research (C), Japan Society for the Promotion of Science, Apr, 2018 - Mar, 2021

Tsukiyama Takuji
Construction of haploid mutant-panel of Flammulina velutipes as a mondel fungus for edible mushroom breeding

Grants-in-Aid for Scientific Research, Grant-in-Aid for Scientific Research (C), Japan Society for the Promotion of Science, Apr, 2017 - Mar, 2020

Tanesaka Eiji
活性型転移因子を利用したゲノムショック育種法の開発

科学研究費補助金(基盤研究(A)), 文部科学省, 2014 - 2018

奥本裕, 寺石政義, 築山拓司, 齊藤大樹, 小出陽平
イネ活性型転移因子mPingの活性を制御する遺伝子の単離

科学研究費補助金(基盤研究(C)), 文部科学省, 2014 - 2017

谷坂隆俊
未利用酵素資源の食品工業、医薬品工業および農業科学への利用

共同研究, ワキ製薬株式会社, Apr, 2015 - Mar, 2016

築山拓司
Effects of an active transposable element mPing on the rice epigenome and its application to plant breeding

Grants-in-Aid for Scientific Research, Grant-in-Aid for Scientific Research (B), Japan Society for the Promotion of Science, 2013 - 2016

TSUKIYAMA Takuji
Molecular reconstruction of a fossilized Stowaway-family transposon Pyong

Grants-in-Aid for Scientific Research, Grant-in-Aid for Challenging Exploratory Research, Japan Society for the Promotion of Science, 2014 - 2015

Tsukiyama Takuji
Alteration of gene expression networks with a rice transposon mPing

Grants-in-Aid for Scientific Research(基盤研究(B)), 基盤研究(B), Ministry of Education, Culture, Sports, Science and Technology, 2010 - 2013

Okumoto YUTAKA, Masayoshi TERAISHI, Takuji TSUKIYAMA, Hiroki SAITO
Analysis of heterosis caused by transposition burst of a transposon mPing in rice

Grants-in-Aid for Scientific Research(挑戦的萌芽研究), 挑戦的萌芽研究, Ministry of Education, Culture, Sports, Science and Technology, 2011 - 2012

Takuji TSUKIYAMA
Elucidation of transposition mechanism a rice MITE Elucidation of a rice MITE mPing for development of high-efficiency transposon tagging system

Grants-in-Aid for Scientific Research(基盤研究(B)), 基盤研究(B), Ministry of Education, Culture, Sports, Science and Technology, 2009 - 2012

谷坂隆俊, Takuji TSUKIYAMA, 築山拓司, Yutaka OKUMOTO, Masayoshi TERAISHI, 谷坂隆俊, Takuji TSUKIYAMA
Origin and activation mechanism of an active transposition of mPingin rice

Grants-in-Aid for Scientific Research(基盤研究(B)), 基盤研究(B), Ministry of Education, Culture, Sports, Science and Technology, 2006 - 2007

Yutaka OKUMOTO, Takatoshi TANISAKA, Tetsuya NAKAZAI, Takuji TSUKIYAMA
Sth/dual and trarisuiptionalchange ofrice genome inducedby transposon, mPing

Grants-in-Aid for Scientific Research(基盤研究(B)), 基盤研究(B), Ministry of Education, Culture, Sports, Science and Technology, 2005 - 2007

Takatoshi TANISAKA, Yutaka OKAMOTO, Tetsuya NAKAZAKI, Masayoshi TERAISHI, Takuji TSUKIYAMA
アブシジン酸によって誘導されるイネクラスⅡキチナーゼCHT11が植物体の老化および成長・発育に及ぼす効果の解析

若手研究者スタートアップ研究費, 京都大学, Apr, 2005 - Mar, 2006

築山拓司
イネにおけるPR-3キチナーゼを介したストレス防御および生育・分化機構の解明

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