AKASHI Satoko

J-GLOBAL         Last updated: Sep 27, 2019 at 14:45
 
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Name
AKASHI Satoko
E-mail
akashiyokohama-cu.ac.jp
Affiliation
Yokohama City University
Section
School of Science, Graduate School of Medical Life Science Department of Medical Life Science
Degree
Doctor (Pharmaceutical Science)(Chiba University)
Research funding number
10280728

Research Areas

 
 

Academic & Professional Experience

 
 
   
 
Associate Professor, Yokohama City University International College of Arts and Sciences Medical Life Science Graduate School of Medical Life Science Department of Medical Life Science
 

Education

 
May 1991
   
 
Ph.D., Chiba University
 
 
   
 
Department of Pharmaceutical Science, Chiba University
 

Committee Memberships

 
2001
   
 
American Society for Mass Spectrometry  editor
 

Awards & Honors

 
2006
The Pharmaceutical Society of Japan Award for Divisional Scientific Promotions '06
 
2002
Mass Spectrometry Society of Japan Award for Excellent Paper
 
1995
Mass Spectrometry Society of Japan Research Award
 

Published Papers

 
Ushijima, H., Maekawa, R., Igarashi, E., Akashi, S.
J. Am. Soc. Mass Spectrom.      Aug 2019   [Refereed]
Structural visualization of key steps in nucleosome reorganization by human FACT.
Mayanagi, K., Saikusa, K., Miyazaki, N., Akashi, S., Iwasaki, K., Nishimura, Y., Morikawa, K, Tsunaka, Y.
Sci. Rep.   9(1) 10183   Jul 2019   [Refereed]
Application of the NZ-1 Fab as a crystallization chaperone for PA tag-inserted target proteins.
Tamura R, Oi R, Akashi S, Kaneko MK, Kato Y, Nogi T.
Protein Sci.   28(4) 823-836   Apr 2019   [Refereed]
Photoinduced in Vivo Magnetic Resonance Imaging (MRI) with Rapid CO Release from an MnCO-Protein Needle Composite.
Hyodo, F., Sho, T., Basudev, M., Fujita, K., Tachibana, Y., Akashi, S., Mano, M., Hishikawa, Y., Matsuo, M., Nakaji, T., Ueno, T.
Chemistry. Eur. J.   24(45) 11578-11583   Aug 2018   [Refereed]
Methyl-selective isotope labeling using α-ketoisovalerate for the yeast Pichia pastoris recombinant protein expression system
Suzuki, R., Sakakura, M., Mori, M., Fujii, M., Akashi, S., Takahashi, H.
J. Biomol. NMR   71(4) 213-228   Aug 2018   [Refereed]

Books etc

 
"Biological Mass Spectrometry : Present Future" , [Proc. Kyoto '92 Int. Conf.](共著)
John Wiley & Sons Ltd.   1994   

Conference Activities & Talks

 
Native mass spectrometry of biomolecular complexes [Invited]
AKASHI Satoko
The 57th Annual Meeting of the Biophysical Society of Japan   24 Sep 2019   
Accurate Mass Determination of Long DNA Fragments Prepared for Structural Biology Study of Epigenetic DNA methylation
Hiroshi Ushijima, Rena Maekawa, Eri Igarashi, Satoko Akashi
The 67th ASMS Conference   6 Jun 2019   
Native mass spectrometry under crude biological conditions
Takano, K., Saikusa, K., Konuma, T., Akashi, S.
The 71st Workshop on Fundamentals, Ionization and Ion Chemistry in Mass Spectrometry   1 Dec 2018   
Reconstitution of nucleosome core particle containing (CCG)n sequence
Hashimoto, K., Nagadoi, A., Konuma, T., Akashi, S.
The 41st Annual Meeting of the Molecular Biology Society of Japan   29 Nov 2018   
Native mass spectrometry of large protein complexes prepared in non-volatile buffers [Invited]
AKASHI Satoko
1 Nov 2018   
Characterization of histone acetylation in nucleosome core particle using mass spectrometry
Haruna Hidaka, Shunsuke Izumi, Satoko Akashi, Kazumi Saikusa
The 56th Annual Meeting of the BSJ   17 Sep 2018   
Structural Diversity of Nucleosomes Characterized by NanoESI-MS and Structural Calculation
AKASHI Satoko
27 Aug 2018   
Structural Diversity of Nucleosome characterized by ion mobility mass spectrometry
SAIKUSA Kazumi, FUCHIGAMI Sotaro, AKASHI Satoko
Mass Spectrometry and Proteomics 2018   16 May 2018   
Behavior of Intrinsically Disordered Regions in Protein Complexes [Invited]
Kazumi Saikusa, Akihisa Osakabe, Yasushi Kawata, Hitoshi Kurumizaka, Satoko Akashi
AS00135121st International Mass Spectrometry Conference   25 Aug 2016   
Effect of intrinsically disordered regions on structures of protein complexes [Invited]
AKASHI Satoko
The 16th annual conference of the protein society of Japan   9 Jun 2016   
Charge Effects on the Conformation of Highly Basic Peptides Characterized by Ion Mobility Mass Spectrometry
AKASHI Satoko, DOWNARD, Kevin, M.
The 64th annual conference on mass spectrometry   18 May 2016   
Native Mass Spectrometry of Protein Complexes with Intrinsically Disordered Regions [Invited]
AKASHI Satoko
2015 Korean Society for Mass Spectrometry Annual Meeting   20 Aug 2015   
Behavior of histone H2A/H2B dimers in the gas phase [Invited]
AKASHI Satoko
The 3rd Global Mass Spectrometry Trends and Ion Chemistry   18 Aug 2015   
Native Mass Spectrometry of Reconstituted Human Nucleosome Core Particle
Satoko Akashi, Nanako Azegami, Kazumi Saikusa, Yasuto Todokoro, Aritaka Nagadoi, Hitoshi Kurumizaka, Yoshifumi Nishimura
20th International Conference on Mass Spectrometry   27 Aug 2014   
Stability of the B2B3-beta crystallin heterodimer to increased oxidation by radical probe and ion mobility mass spectrometry
Kevin Downard, Satoko Akashi, Simin Maleknia, Kazumi Saikusa
20th International Conference on Mass Spectrometry   27 Aug 2014   
Behavior of the disordered tail regions of the histone H2A/H2B dimer
Kazumi Saikusa, Aritaka Nagadoi, Kana Hara, Sotaro Fuchigami, Hitoshi Kurumizaka, Yoshifumi Nishimura and Satoko Akashi
20th International Conference on Mass Spectrometry   27 Aug 2014   
Structure of histone H2A/H2B dimer analyzed by ion mobility mass spectrometry and molecular dynamics simulation
Kazumi Saikusa, Sotaro Fuchigami, Yuuki Asano, Aritaka Nagadoi, Hiroaki Tachiwana, Hitoshi Kurumizaka, Mitsunori Ikeguchi, Yoshifumi Nishimura, Satoko Akashi
The 61st ASMS Conference on Mass Spectrometry and Allied Topics   11 Jun 2013   
Characterization of IDPs by Mass Spectrometry and MD simulation
AKASHI Satoko
2nd International Symposium on Intrinsically Disordered Proteins   23 Jan 2013   
Structure of a Beta-Crystallin Heterodimer by Ion Mobility and Radical Probe Mass Spectrometry
Kevin Downard, Yuichi Kokabu, Mitsunori Ikeguchi, Satoko Akashi
19th International Conference on Mass Spectrometry   20 Sep 2012   
Behavior of intrinsically disordered regions within a protein complex of Swi5-Sfr1 characterized by IM-MS and SAXS
Kazumi Saikusa, Naoyuki Kuwabara, Yuichi Kokabu, Mamoru Sato, Hiroshi Iwasaki, Mitsunori Ikeguchi, Toshiyuki Shimizu, *Satoko Akashi
19th International Conference on Mass Spectrometry   20 Sep 2012   
What happens on the histone multimers in the gas phase?
Kazumi Saikusa, Sotaro Fuchigami, Kyohei Takahashi, Yuuki Asano, Aritaka Nagadoi, Hiroaki Tachiwana, Hitoshi Kurumizaka, Mitsunori Ikeguchi, Yoshifumi Nishimura, Satoko Akashi
19th International Conference on Mass Spectrometry   17 Sep 2012   
Application of Homology Modelling, Ion Mobility and Protein Footprinting in Unison to Characterize Protein Bimolecular Complexes
Yuichi Kokabu, Mitsunori Ikeguchi, Satoko Akashi, Kevin Downard
The 60th ASMS Conference on Mass Spectrometry and Allied Topics   24 May 2012   
Impact of Protein Oxidation on their Ion Mobility for Protein Footprinting Applications
138. Simin Maleknia, Satoko Akashi, Kevin Downard
The 60th ASMS Conference on Mass Spectrometry and Allied Topics   23 May 2012   
Behavior of Intrinsically Disordered Regions within a Protein Complex of Swi5-Sfr1 Characterized by Ion Mobility Mass Spectrometry
Kazumi Saikusa, Naoyuki Kuwabara, Yuichi Kokabu, Mamoru Sato, Hiroshi Iwasaki, Mitsunori Ikeguchi, Toshiyuki Shimizu, and Satoko Akashi
The 60th ASMS Conference on Mass Spectrometry and Allied Topics   23 May 2012   
Mass Spectrometry of Histone Multimers
AKASHI Satoko
The 2nd Asian Oceanic Mass Spectrometry Conference   18 Aug 2011   
Characterization of histone multimers by ESI- MS
Shingo Shimoyama, Yuuki Asano, Kyohei Takahashi, Kazumi Saikusa, Aritaka Nagadoi, Hiroaki Tachiwana, Hitoshi Kurumizaka, Yoshifumi Nishimura, *Satoko Akashi
The 59th ASMS Conference on Mass Spectrometry and Allied Topics   2 Jun 2011   
質量分析によるタンパク質複合体の相互作用解析
AKASHI Satoko
10 Mar 2011   
Mass Spectrometry for Characterization of IDPs
AKASHI Satoko
The 1st International Symposium on Intrinsically Disordered Proteins   27 Jan 2011   
Comprehensive analysis of the TRAP-Anti-TRAP complex by ESI-MS and X-ray crystallography
The 57th ASMS Conference on Mass Spectrometry and Allied Topics   2009   
Studies of protein-protein and protein-RNA complexes by mass spectrometry
2008   
Structure Analysis of TRAP, TRAP-RNA, and TRAP-anti-TRAP Complexes
2008   
構造生物学での質量分析
2008   
Mass Spectrometry of Macromolecular Complexes: Elucidation of Architecture of General Transcription Factors, TFIIE and TFIIF
2008   
Dynamic allostery in the tryptophan-binding protein TRAP
IGBMC Workshop biobinding 2007   2007   
The binding of human telomeric protein TRF2 to DNA as explored by high resolution PLIMSTEX and novel kinetic modeling
The 55th ASMS Conference on Mass Spectrometry and Allied Topics   2007   
Quantitative investigation of the stabilities and conformational changes of proteins by laser spray mass spectrometry
The 54th ASMS Conference on Mass Spectrometry and Allied Topics   2006   
Laser spray mass spectrometry; a promising tool for the analysis of stability of biological macromolecules in solution
The 54th ASMS Conference on Mass Spectrometry and Allied Topics   2006   
Interaction of human TRF2 with double-stranded DNA or G-quadruplex structures
MBSJ Forum 2006 Molecular Biology ?the Next Decade- Conference & Scientific Exhibition   2006   

Research Grants & Projects

 
Development of native mass spectrometry for protein complexes under crude biological conditions
Nakatani Foundation: Grant Program for Research Study
Project Year: Apr 2019 - Mar 2020    Investigator(s): AKASHI Satoko
Structural Biology of modified nucleosomes using mass spectrometry
JSPS: Grant-in-Aid for Scientific Research (C)
Project Year: Apr 2017 - Mar 2020    Investigator(s): AKASHI Satoko
Development of ionization methods in mass spectrometry for biological molecules. -Characterization of biological reactions using mass spectrometry with newly dveloped ionization methods-
Special Coordination Funds for Promoting Science and Technology
Project Year: 2003 - 2005
Mass spectrometry of protein complexes
Grant-in-Aid for Scientific Research
Project Year: 2001   
Structural biology of protein complexes by mass spectrometry
Structural Characterization of DNA binding Proteins by Mass Spectrometry
Project Year: 2001