IGARASHI Noriyuki

Last updated: Sep 28, 2018 at 13:01

Name	IGARASHI Noriyuki
Affiliation	Institute of Materials Structure Science
Section	Photon Factory
Job title	Associate Professor
Degree	Ph. D.(Tokyo Institute of Technology)

Research Interests

biological macromolecule(2) , three dimensional structure(5) , X-ray crystallography(67) , synchrotron research(1) , structural biology(153)

Research Areas

Biological Science / Structural biochemistry / synchrotron structural biology

Published Papers

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Structural analyses of sphere- and cylinder-forming triblock copolymer thin films near the free surface by atomic force microscopy, X-ray photoelectron spectroscopy, and grazing-incidence small-angle X-ray scattering

Bayomi Rasha Ahmed Hanafy, Aoki Takashi, Shimojima Takuma, Takagi Hideaki, Shimizu Nobutaka, Igarashi Noriyuki, Sasaki Sono, Sakurai Shinichi

POLYMER 147 202-212 Jul 2018 [Refereed]

Direct Evidence for the Effect of Glycerol on Protein Hydration and Thermal Structural Transition.

Hirai M, Ajito S, Sugiyama M, Iwase H, Takata SI, Shimizu N, Igarashi N, Martel A, Porcar L

Biophysical journal 115(2) 313-327 Jul 2018 [Refereed]

Time-resolved 2d-SAXS measurements to reveal mechanism of cylinder orientation upon sphere-to-cylinder transition under a planar flow in an SEBS triblock copolymer sheet

Tomita Shogo, Shimizu Nobutaka, Igarashi Noriyuki, Takagi Hideaki, Sasaki Sono, Sakurai Shinichi

EUROPEAN POLYMER JOURNAL 93 382-389 Aug 2017 [Refereed]

Coalescence of non-equilibrium spheres through thermal annealing in a polystyrene-block-poly(ethylene-co-butylene)-block-polystyrene triblock copolymer film under a uniaxially stretched state

Tomita Shogo, Shimizu Nobutaka, Igarashi Noriyuki, Takagi Hideaki, Sasaki Sono, Sakurai Shinichi

POLYMER JOURNAL 49(6) 519-526 Jun 2017 [Refereed]

Frank-Kasper σ phase in polybutadiene-poly(ε-caprolactone) diblock copolymer/polybutadiene blends.

Takagi H, Hashimoto R, Igarashi N, Kishimoto S, Yamamoto K

Journal of physics. Condensed matter : an Institute of Physics journal 29(20) 204002 May 2017 [Refereed]

Strain-Induced Deformation of Glassy Spherical Microdomains in Elastomeric Triblock Copolymer Films: Time-Resolved 2d-SAXS Measurements under Stretched State

Tomita Shogo, Wataoka Isao, Igarashi Noriyuki, Shimizu Nobutaka, Takagi Hideaki, Sasaki Sono, Sakurai Shinichi

MACROMOLECULES 50(8) 3404-3410 Apr 2017 [Refereed]

Orienting cylindrical microdomains in polystyrene-b-poly(ethylene-co-butylene)-b-polystyrene triblock copolymer/diluent sheet by application of temperature gradient*)

Yamanaka Ryo, Shimizu Nobutaka, Igarashi Noriyuki, Takagi Hideaki, Sakurai Shinichi

POLIMERY 62(11-12) 812-820 2017 [Refereed]

Effect of protein-encapsulation on thermal structural stability of liposome composed of glycosphingolipid/cholesterol/phospholipid.

Hirai M, Sato S, Kimura R, Hagiwara Y, Kawai-Hirai R, Ohta N, Igarashi N, Shimizu N

The journal of physical chemistry. B 119(8) 3398-3406 Feb 2015 [Refereed]

Small-angle X-ray scattering studies on melting and recrystallization behaviors of poly(oxyethylene) crystallites in poly(D,L-lactide)/poly(oxyethylene) blends

Nguyen-Dung Tien, Sasaki Sono, Masunaga Hiroyasu, Shimizu Nobutaka, Igarashi Noriyuki, Sakurai Shinichi

POLYMER 55(10) 2562-2569 May 2014 [Refereed]

Structure of liposome encapsulating proteins characterized by X-ray scattering and shell-modeling.

Hirai M, Kimura R, Takeuchi K, Hagiwara Y, Kawai-Hirai R, Ohta N, Igarashi N, Shimuzu N

Journal of synchrotron radiation 20(Pt 6) 869-874 Nov 2013 [Refereed]

Improvements toward highly accurate diffraction experiments at the macromolecular micro-crystallography beamline BL-17A.

Yamada Y, Chavas LM, Igarashi N, Hiraki M, Wakatsuki S, Matsugaki N

Journal of synchrotron radiation 20(Pt 6) 938-942 Nov 2013 [Refereed]

UV LED lighting for automated crystal centring.

Chavas LM, Yamada Y, Hiraki M, Igarashi N, Matsugaki N, Wakatsuki S

Journal of synchrotron radiation 18(1) 11-15 Jan 2011 [Refereed]

Crystallization of small proteins assisted by green fluorescent protein.

Suzuki N, Hiraki M, Yamada Y, Matsugaki N, Igarashi N, Kato R, Dikic I, Drew D, Iwata S, Wakatsuki S, Kawasaki M

Acta crystallographica. Section D, Biological crystallography 66 1059-1066 Oct 2010 [Refereed]

[Advancement of synchrotron radiation protein crystallography in the targeted protein research program: beamline developments at the photon factory].

Wakatsuki S, Yamada Y, Chavas LM, Igarashi N, Kawasaki M, Kato R, Hiraki M, Matsugaki N

Yakugaku zasshi : Journal of the Pharmaceutical Society of Japan 130(5) 631-640 May 2010 [Refereed]

[Structure determination of proteins without preparing derivative crystals].

Matsugaki N, Yamada Y, Hiraki M, Igarashi N, Wakatsuki S

Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 54 1484-1489 Sep 2009 [Refereed]

Development of an X-ray HARP-FEA detector system for high-throughput protein crystallography.

Miyoshi T, Igarashi N, Matsugaki N, Yamada Y, Hirano K, Hyodo K, Tanioka K, Egami N, Namba M, Kubota M, Kawai T, Wakatsuki S

Journal of synchrotron radiation 15(3) 281-284 May 2008 [Refereed]

X-ray beam stabilization at BL-17A, the protein microcrystallography beamline of the Photon Factory.

Igarashi N, Ikuta K, Miyoshi T, Matsugaki N, Yamada Y, Yousef MS, Wakatsuki S

Journal of synchrotron radiation 15(3) 292-295 May 2008 [Refereed]

Implementation of remote monitoring and diffraction evaluation systems at the Photon Factory macromolecular crystallography beamlines.

Yamada Y, Phonda N, Matsugaki N, Igarashi N, Hiraki M, Wakatsuki S

Journal of synchrotron radiation 15(3) 296-299 May 2008 [Refereed]

High-throughput operation of sample-exchange robots with double tongs at the Photon Factory beamlines.

Hiraki M, Watanabe S, Phonda N, Yamada Y, Matsugaki N, Igarashi N, Gaponov Y, Wakatsuki S

Journal of synchrotron radiation 15(3) 300-303 May 2008 [Refereed]

Structural basis for tropomyosin overlap in thin (actin) filaments and the generation of a molecular swivel by troponin-T.

Murakami K, Stewart M, Nozawa K, Tomii K, Kudou N, Igarashi N, Shirakihara Y, Wakatsuki S, Yasunaga T, Wakabayashi T

Proceedings of the National Academy of Sciences of the United States of America 105(20) 7200-7205 May 2008 [Refereed]

[Structural and functional biology for post translational modification and transport in eukaryotes].

Wakatsuki S, Kato R, Kawasaki M, Igarashi N, Masahiko H

Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 53 628-631 Apr 2008 [Refereed]

Development of an automated large-scale protein-crystallization and monitoring system for high-throughput protein-structure analyses.

Hiraki M, Kato R, Nagai M, Satoh T, Hirano S, Ihara K, Kudo N, Nagae M, Kobayashi M, Inoue M, Uejima T, Oda S, Chavas LM, Akutsu M, Yamada Y, Kawasaki M, Matsugaki N, Igarashi N, Suzuki M, Wakatsuki S

Acta crystallographica. Section D, Biological crystallography 62 1058-1065 Sep 2006 [Refereed]

Structures of the carbohydrate recognition domain of Ca2+-independent cargo receptors Emp46p and Emp47p.

Satoh T, Sato K, Kanoh A, Yamashita K, Yamada Y, Igarashi N, Kato R, Nakano A, Wakatsuki S

The Journal of biological chemistry 281(15) 10410-10419 Apr 2006 [Refereed]

Structural basis for transcription inhibition by tagetitoxin.

Vassylyev DG, Svetlov V, Vassylyeva MN, Perederina A, Igarashi N, Matsugaki N, Wakatsuki S, Artsimovitch I

Nature structural & molecular biology 12(12) 1086-1093 Dec 2005 [Refereed]

Structural basis of transcription inhibition by antibiotic streptolydigin.

Temiakov D, Zenkin N, Vassylyeva MN, Perederina A, Tahirov TH, Kashkina E, Savkina M, Zorov S, Nikiforov V, Igarashi N, Matsugaki N, Wakatsuki S, Severinov K, Vassylyev DG

Molecular cell 19(5) 655-666 Sep 2005 [Refereed]

Allosteric modulation of the RNA polymerase catalytic reaction is an essential component of transcription control by rifamycins.

Artsimovitch I, Vassylyeva MN, Svetlov D, Svetlov V, Perederina A, Igarashi N, Matsugaki N, Wakatsuki S, Tahirov TH, Vassylyev DG

Cell 122(3) 351-363 Aug 2005 [Refereed]

Molecular mechanism of ubiquitin recognition by GGA3 GAT domain.

Kawasaki M, Shiba T, Shiba Y, Yamaguchi Y, Matsugaki N, Igarashi N, Suzuki M, Kato R, Kato K, Nakayama K, Wakatsuki S

Genes to cells : devoted to molecular & cellular mechanisms 10(7) 639-654 Jul 2005 [Refereed]

[Progress and maturation of protein crystallographic experiments].

Wakatsuki S, Kato R, Igarashi N, Kawasaki M, Matsugaki N, Hiraki M, Yamada Y

Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 50 846-852 Jun 2005 [Refereed]

[The Photon Factory, a synchrotron radiation facility].

Wakatsuki S, Hiraki M, Gaponov Y, Suzuki M, Igarashi N, Matsugaki N

Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 49 1816-1820 Aug 2004 [Refereed]

Impurity effects on lysozyme crystal growth.

Yoshizaki I, Kadowaki A, Iimura Y, Igarashi N, Yoda S, Komatsu H

Journal of synchrotron radiation 11 30-33 Jan 2004 [Refereed]

Secure UNIX socket-based controlling system for high-throughput protein crystallography experiments.

Gaponov Y, Igarashi N, Hiraki M, Sasajima K, Matsugaki N, Suzuki M, Kosuge T, Wakatsuki S

Journal of synchrotron radiation 11 17-20 Jan 2004 [Refereed]

Molecular mechanism of membrane recruitment of GGA by ARF in lysosomal protein transport.

Shiba T, Kawasaki M, Takatsu H, Nogi T, Matsugaki N, Igarashi N, Suzuki M, Kato R, Nakayama K, Wakatsuki S

Nature structural biology 10(5) 386-393 May 2003 [Refereed]

The 2.0 A crystal structure of catalase-peroxidase from Haloarcula marismortui.

Yamada Y, Fujiwara T, Sato T, Igarashi N, Tanaka N

Nature structural biology 9 691-695 Sep 2002 [Refereed]

Structural basis for the accessory protein recruitment by the gamma-adaptin ear domain.

Nogi T, Shiba Y, Kawasaki M, Shiba T, Matsugaki N, Igarashi N, Suzuki M, Kato R, Takatsu H, Nakayama K, Wakatsuki S

Nature structural biology 9 527-531 Jul 2002 [Refereed]

Structural basis for recognition of acidic-cluster dileucine sequence by GGA1.

Shiba T, Takatsu H, Nogi T, Matsugaki N, Kawasaki M, Igarashi N, Suzuki M, Kato R, Earnest T, Nakayama K, Wakatsuki S

Nature 415 937-941 Feb 2002 [Refereed]

Misc

Plain Text

High-throughput Structural Biology at the Beam Line PF-AR NW12

MATSUGAKI Naohiro, IGARASHI Noriyuki, SUZUKI Mamoru, HIRAKI Masahiko, WAKATSUKI Soichi

17(3) 144-152 May 2004

Enhancements of resolution maximum of diffaction in protein crystal grown under high magnetic field

Sato Takao, Yamada Yusuke, Saijo Shinya, Tanaka Nobuo, Sazaki Gen, Nakajima Kazuo, Igarashi Noriyuki, Tanaka Masahiko, Matsuura Yoshiki

Journal of the Japanese Association of Crystal Growth 27(1) Jul 2000

Orthorhombic lysozyme crystals grown under high magnetic field showed improvements both in maximum resolution of diffraction ( 1.33Å to 1.13Å) and lower mosaicity (30 % decrease) for X-ray analysis.

X-ray Crystallographic Structure of the Novel Multipleheme Enzyme, Hydroxylamine Oxidoreductase from Nitrosomonas Europaea

IGARASHI Noriyuki

Nihon Kessho Gakkaishi 41(5) 283-292 Oct 1999

The 2.8Å crystal structure of the novel multiple-heme enzyme, hydroxylamine oxidoreductase from a nitrifying chemoautotrophic bacterium, Nitrosonnonas europaea, is described. Twenty-four hemes lie in the center bottom of the trimeric molecu...

The crystal structure of hydroxylamine oxidoreductase from Nitrosomonas europaea

TANAKA Nobuo, MORIYAMA Hideaki, IGARASHI Noriyuki

Biophysics 38(4) 162-166 Jul 1998

Crystallization and Preliminary X-Ray Analysis of Cytochrome c-554 from Nitrosomonas europaea

NAGATA Chikahiro, IGARASHI Noriyuki, MORIYAMA Hideaki, FUJIWARA Taketomo, FUKUMORI Yoshihiro, TANAKA Nobuo

117(5) 931-932 May 1995