論文

査読有り 本文へのリンクあり
2015年4月

Nano-mole scale side-chain signal assignment by1H-detected protein solid-state NMR by ultra-fast magic-angle spinning and stereo-array isotope labeling

PLoS ONE
  • Songlin Wang
  • Sudhakar Parthasarathy
  • Yusuke Nishiyama
  • Yuki Endo
  • Takahiro Nemoto
  • Kazuo Yamauchi
  • Tetsuo Asakura
  • Mitsuhiro Takeda
  • Tsutomu Terauchi
  • Masatsune Kainosho
  • Yoshitaka Ishii
  • 全て表示

10
4
開始ページ
e0122714
終了ページ
記述言語
英語
掲載種別
研究論文(学術雑誌)
DOI
10.1371/journal.pone.0122714
出版者・発行元
PUBLIC LIBRARY SCIENCE

© 2015 Wang et al. We present a general approach in 1H-detected 13C solid-state NMR (SSNMR) for side-chain signal assignments of 10-50 nmol quantities of proteins using a combination of a high magnetic field, ultra-fast magic-angle spinning (MAS) at ∼80 kHz, and stereo-array-isotope-labeled (SAIL) proteins [Kainosho M. et al., Nature 440, 52-57, 2006]. First, we demonstrate that 1H indirect detection improves the sensitivity and resolution of 13C SSNMR of SAIL proteins for side-chain assignments in the ultra-fast MAS condition. 1H-detected SSNMR was performed for micro-crystalline ubiquitin (∼55 nmol or ∼0.5mg) that was SAIL-labeled at seven isoleucine (Ile) residues. Sensitivity was dramatically improved by 1H-detected 2D 1H/13C SSNMR by factors of 5.4-9.7 and 2.1-5.0, respectively, over 13C-detected 2D 1H/13C SSNMR and 1D 13C CPMAS, demonstrating that 2D 1H-detected SSNMR offers not only additional resolution but also sensitivity advantage over 1D 13C detection for the first time. High 1H resolution for the SAIL-labeled side-chain residues offered reasonable resolution even in the 2D data. A 1H-detected 3D 13C/13C/1H experiment on SAIL-ubiquitin provided nearly complete 1H and 13C assignments for seven Ile residues only within ∼2.5 h. The results demonstrate the feasibility of side-chain signal assignment in this approach for as little as 10 nmol of a protein sample within ∼3 days. The approach is likely applicable to a variety of proteins of biological interest without any requirements of highly efficient protein expression systems.

リンク情報
DOI
https://doi.org/10.1371/journal.pone.0122714
PubMed
https://www.ncbi.nlm.nih.gov/pubmed/25856081
Web of Science
https://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=JSTA_CEL&SrcApp=J_Gate_JST&DestLinkType=FullRecord&KeyUT=WOS:000352588500049&DestApp=WOS_CPL
Scopus
https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=84929492993&origin=inward 本文へのリンクあり
Scopus Citedby
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ID情報
  • DOI : 10.1371/journal.pone.0122714
  • ISSN : 1932-6203
  • eISSN : 1932-6203
  • PubMed ID : 25856081
  • SCOPUS ID : 84929492993
  • Web of Science ID : WOS:000352588500049

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