Gromiha Maria Siluvay Michael - My portal

Profile Information

Affiliation: Adjunct Professor, Institute of Innovative Research, Tokyo Institute of Technology

J-GLOBAL ID: 200901004254038672
researchmap Member ID: 5000087319

Research History

National Institute of Advanced Industrial Science and Technology

Misc.

Classification of protein-DNA complexes based on structural descriptors

Ponraj Prabakaran, Jorg G. Siebers, Shandar Ahmad, M. Michael Gromiha, Maria G. Singarayan, Akinori Sarai

STRUCTURE, 14(9) 1355-1367, Sep, 2006
CUPSAT: prediction of protein stability upon point mutations

Vijaya Parthiban, M. Michael Gromiha, Dietmar Schomburg

NUCLEIC ACIDS RESEARCH, 34 W239-W242, Jul, 2006
Discrimination of outer membrane proteins using machine learning algorithms

M. Michael Gromiha, Makiko Suwa

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 63(4) 1031-1037, Jun, 2006
A statistical method for predicting protein unfolding rates from amino acid sequence

M. Michael Gromiha, S. Selvaraj, A. Mary Thangakani

JOURNAL OF CHEMICAL INFORMATION AND MODELING, 46(3) 1503-1508, May, 2006
Average assignment method for predicting the stability of protein mutants

K Saraboji, MM Gromiha, MN Ponnuswamy

BIOPOLYMERS, 82(1) 80-92, May, 2006
Analysis of cation-pi interactions to the structural stability of RNA binding proteins

S Chakkaravarthi, MM Gromiha

POLYMER, 47(2) 709-721, Jan, 2006
PINT: Protein-protein Interactions Thermodynamic Database

NUCLEIC ACIDS RESEARCH, 2006
ProTherm and ProNIT: thermodynamic databases for proteins and protein-nucleic acid interactions.

NUCLEIC ACIDS RESEARCH, 2006
Role of inter and intramolecular interactions in protein-DNA recognition

MM Gromiha, JG Slebcrs, S Selvaraj, H Kono, A Sarai

GENE, 364 108-113, Dec, 2005
Discrimination of outer membrane proteins using support vector machines

KJ Park, MM Gromiha, P Horton, M Suwa

BIOINFORMATICS, 21(23) 4223-4229, Dec, 2005
Motifs in outer membrane protein sequences: Applications for discrimination

MM Gromiha

BIOPHYSICAL CHEMISTRY, 117(1) 65-71, Aug, 2005
SRide: a server for identifying stabilizing residues in proteins

C Magyar, MM Gromiha, G Pujadas, GE Tusnady, Simon, I

NUCLEIC ACIDS RESEARCH, 33(W1) W303-W305, Jul, 2005
TMBETA-NET: discrimination and prediction of membrane spanning beta-strands in outer membrane proteins

MM Gromiha, S Ahmad, M Suwa

NUCLEIC ACIDS RESEARCH, 33(W1) W164-W167, Jul, 2005
Influence of DNA stiffness in protein-DNA recognition

MM Gromiha

JOURNAL OF BIOTECHNOLOGY, 117(2) 137-145, May, 2005
Application of residue distribution along the sequence for discriminating outer membrane proteins

MM Gromiha, S Ahmad, M Suwa

COMPUTATIONAL BIOLOGY AND CHEMISTRY, 29(2) 135-142, Apr, 2005
Importance of main-chain hydrophobic free energy to the stability of thermophilic proteins

K Saraboji, MM Gromiha, MN Ponnuswamy

INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 35(3-4) 211-220, Apr, 2005
A simple statistical method for discriminating outer membrane proteins with better accuracy

MM Gromiha, M Suwa

BIOINFORMATICS, 21(7) 961-968, Apr, 2005
A statistical model for predicting protein folding rates from amino acid sequence with structural class information

MM Gromiha

JOURNAL OF CHEMICAL INFORMATION AND MODELING, 45(2) 494-501, Mar, 2005
Structural analysis of residues involving cation-pi interactions in different folding types of membrane proteins

MM Gromiha, M Suwa

INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 35(1-2) 55-62, Mar, 2005
Integration of bioinformatics and computational biology to understand protein-DNA recognition mechanism

Akinori Sarai, Jorg Siebers, Samuel Selvaraj, M. Michael Gromiha, Hidetoshi Kono

Journal of Bioinformatics and Computational Biology, 3(1) 169-183, Feb, 2005