論文

査読有り
2022年

Identification of 146 Metagenome-assembled Genomes from the Rumen Microbiome of Cattle in Japan

Microbes and Environments
  • Yoshiaki Sato
  • ,
  • Hiroaki Takebe
  • ,
  • Kazato Oishi
  • ,
  • Jumpei Yasuda
  • ,
  • Hajime Kumagai
  • ,
  • Hiroyuki Hirooka
  • ,
  • Takashi Yoshida

37
4
開始ページ
n/a
終了ページ
n/a
記述言語
英語
掲載種別
研究論文(学術雑誌)
DOI
10.1264/jsme2.me22039
出版者・発行元
Japanese Society of Microbial Ecology

The rumen contains a complex microbial ecosystem that degrades plant materials, such as cellulose and hemicellulose. We herein reconstructed 146 nonredundant, rumen-specific metagenome-assembled genomes (MAGs), with ≥50% completeness and <10% contamination, from cattle in Japan. The majority of MAGs were potentially novel strains, encoding various enzymes related to plant biomass degradation and volatile fatty acid production. The MAGs identified in the present study may be valuable resources to enhance the resolution of future taxonomical and functional studies based on metagenomes and metatranscriptomes.

リンク情報
DOI
https://doi.org/10.1264/jsme2.me22039
PubMed
https://www.ncbi.nlm.nih.gov/pubmed/36273894
PubMed Central
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9763041
URL
https://www.jstage.jst.go.jp/article/jsme2/37/4/37_ME22039/_pdf
ID情報
  • DOI : 10.1264/jsme2.me22039
  • ISSN : 1342-6311
  • eISSN : 1347-4405
  • PubMed ID : 36273894
  • PubMed Central 記事ID : PMC9763041

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