NARIKAWA Rei

J-GLOBAL         Last updated: Nov 22, 2019 at 02:58
 
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Name
NARIKAWA Rei
URL
http://narikawa-lab.wixsite.com/narikawa-laboratory
Affiliation
Shizuoka University
Section
Faculty of Science - Department of Biological Science
Job title
Lecturer
Degree
Doctor of Phylosophy(University of Tokyo)
Other affiliation
Shizuoka UniversityShizuoka University

Research Areas

 
 

Academic & Professional Experience

 
 
   
 
The University of Tokyo Graduate School of Arts and Sciences, Multi-Disciplinary Sciences Life Sciences
 

Published Papers

 
Protein engineering of dual-Cys cyanobacteriochrome AM1_1186g2 for biliverdin incorporation and far-red/blue reversible photoconversion
Yuto Kuwasaki, Keita Miyake, Keiji Fushimi, Yuka Takeda, Yoshibumi Ueda, Takahiro Nakajima, Masahiko Ikeuchi, Moritoshi Sato and Rei Narikawa
Int. J. Mol. Sci.   20(12) 2935   Jun 2019   [Refereed]
Rational conversion of chromophore selectivity of cyanobacteriochromes to accept mammalian intrinsic biliverdin
Keiji Fushimi, Takatsugu Miyazaki, Yuto Kuwasaki, Takahiro Nakajima, Tatsuro Yamamoto, Kazushi Suzuki, Yoshibumi Ueda, Keita Miyake, Yuka Takeda, Jae-Hoon Choi, Hirokazu Kawagishi, Enoch Y. Park, Masahiko Ikeuchi, Moritoshi Sato, Rei Narikawa
Proc. Natl. Acad. Sci. U. S. A.   116(17) 8301-8309   Apr 2019   [Refereed]
Keiji Fushimi, Rei Narikawa
Curr. Opin. Struct. Biol.   57 39-46   Mar 2019   [Refereed]
Genetic identification of factors for extracellular cellulose accumulation in the thermophilic cyanobacterium Thermosynechococcus vulcanus: proposal of a novel tripartite secretion system.
[責任著者]Masahiko Ikeuchi [共著者]Kaisei Maeda,Jun Tamura, Yukiko Okuda,Rei Narikawa,Takafumi Midorikawa,Masahiko Ikeuchi
Mol. Microbiol.   109(1) 121-134   May 2018   [Refereed]
Molecular characterization of DXCF cyanobacteriochromes from the cyanobacterium Acaryochloris marina identifies a blue-light power sensor
[責任著者]Rei Narikawa [共著者]Masumi Hasegawa,Keiji Fushimi, Keita Miyake,Takahiro Nakajima, Yuki Oikawa,Gen Enomoto, Moritoshi Sato,Masahiko Ikeuchi
J. Biol. Chem.   293(5) 1713-1727   Feb 2018   [Refereed]
The expanded red/green cyanobacteriochrome lineage: An evolutionary hotspot
[責任著者]Rei Narikawa [共著者]Keiji Fushimi,Masahiko Ikeuchi
Photochem. Photobiol.   93(3) 903-906   May 2017   [Refereed]
Structural heterogeneity in parent ground-state structure in AnPixJg2 revealed by spectroscopy and theory
[責任著者]Daniel Sebastiani [共著者]Laura Katharina Scarbath-Evers,Sascha Jähnigen, Hossam Elgabarty,Chen Song,Rei Narikawa,Jörg Matysik
Phys. Chem. Chem. Phys.   19(21) 13882-13894   May 2017   [Refereed]
Distinctive properties of dark reversion kinetics between two red/green-type cyanobacteriochromes and their application in the photoregulation of cAMP synthesis
[責任著者]Rei Narikawa [共著者]Keiji Fushimi,Gen Enomoto,Masahiko Ikeuchi
Photochem. Photobiol.   93(3) 681-691   May 2017   [Refereed]
Photoresponsive strategy of cyanobacteria
[責任著者]成川 礼 [共著者]樫本 友則
Bull. Plankton Soc. Japan   64(1) 67-71   Feb 2017   [Refereed]
CyanoBase: a large-scale update on its 20th anniversary.
[責任著者]Yasukazu Nakamura [共著者]Takatomo Fujisawa,Rei Narikawa,Shin-ichi Maeda, Satoru Watanabe, Yu Kanesaki, Koichi Kobayashi,Jiro Nomata, Mitsumasa Hanaoka, Mai Watanabe, Shigeki Ehira, Eiji Suzuki ,Koichiro Awai
Nucleic Acids Res.   45(D1) D551-D554   Jan 2017   [Refereed]
Cyanobacteriochrome Photoreceptors Lacking the Canonical Cys Residue
[責任著者]Rei Narikawa [共著者]Keiji Fushimi,Nathan C Rockwell,Gen Enomoto G, Ni-Ni-Win, Shelly S Martin, ,Fei Gan, Donald A Bryant, J Clark Lagarias,Masahiko Ikeuchi
Biochemistry   55(50) 6981-6995   Dec 2016   [Refereed]
Conversion of photosystem II dimer to monomers during photoinhibition is tightly coupled with decrease in oxygen-evolving activity in the diatom Chaetoceros gracilis
[責任著者]Ryo Nagao [共著者]Tatsuya Tomo,Rei Narikawa,Isao Enami,Masahiko Ikeuchi
Photosynthesis Research   130(1-3) 83-91   Dec 2016   [Refereed]
Photoconversion and fluorescence properties of a red/green-type cyanobacteriochrome AM1_C0023g2 that binds not only phycocyanobilin but also biliverdin
[責任著者]Rei Narikawa [共著者]Keiji Fushimi,Takahiro Nakajima, Yuki Aono,Tatsuro Yamamoto, Ni-Ni-Win,Masahiko Ikeuchi,Moritoshi Sato
Frontiers in Microbiology   7 588-588   Apr 2016   [Refereed]
A red/green cyanobacteriochrome sustains its color despite a change of the bilin chomophore's protonation state
[責任著者]Peter Hildebrandt [共著者]Chen Song, Francisco Velazquez Escobar,Xiu-Ling Xu, Rei Narikawa,Masahiko Ikeuchi, Friedrich Siebert,Wolfgang Gaertner, Joerg Matysik
Biochemistry   54(38) 5839-5848   Sep 2015   [Refereed]
Color tuning in red/green cyanobacteriochrome AnPixJ: Photoisomerization at C15 causes an excited-state destabilization.
[責任著者]Joerg Matysik [共著者]Cheng Song,Rei Narikawa,Masahiko Ikeuchi,Wolfgang Gaertner
J. Phys. Chem. B   119(30) 9688-9695   Jul 2015   [Refereed]
Three cyanobacteriochromes work together to form a light color-sensitive input system for c-di-GMP signaling of cell aggregation.
[責任著者]Masahiko Ikeuchi [共著者]Gen Enomoto,Ni-Ni-Win,Rei Narikawa
Proc. Natl. Acad. Sci. U. S. A.   112(26) 8082-8087   Jun 2015   [Refereed]
Red-shifted red/green-type cyanobacteriochrome AM1_1870g3 from the chlorophyll d-bearing cyanobacterium Acaryochloris marina.
[責任著者]Rei Narikawa [共著者]Keiji Fushimi,Ni-Ni-Win,Masahiko Ikeuchi
Biochem. Biophys. Res. Commun.   461(2) 390-395   Apr 2015   [Refereed]
Measurement of nucleotide triphosphate sugar transferase activity via generation of pyrophosphate
[責任著者]Masahiko Ikeuchi [共著者]Kaisei Maeda,Rei Narikawa
Bio-protocol   5(8) e1450   Apr 2015   [Refereed]
A biliverdin-binding cyanobacteriochrome from the chlorophyll d-bearing cyanobacterium Acaryochloris marina
[責任著者]Rei Narikawa [共著者]Takahiro Nakajima, Yuki Aono,Keiji Fushimi, Gen Enomoto,Ni-Ni-Win, Shigeru Itoh,Moritoshi Sato,Masahiko Ikeuchi
Sci. Rep.   5 7950-7950   Jan 2015   [Refereed]
Cyanobacteriochrome SesA is a diguanylate cyclase that induces cell aggregation in Thermosynechococcus.
[責任著者]Masahiko Ikeuchi [共著者]Gen Enomoto,Ryouhei Nomura,Takashi Shimada,Ni-Ni-Win, Rei Narikawa,Masahiko Ikeuchi
J. Biol. Chem.   289(36) 24801-24809   Sep 2014   [Refereed]
A new dual-Cys cyanobacteriochrome GAF domain found in cyanobacterium Acaryochloris marina, which has an unusual red/blue reversible photoconversion cycle.
[責任著者]Rei Narikawa [共著者]Gen Enomoto,Ni-Ni-Win,Keiji Fushimi,Masahiko Ikeuchi
Biochemistry   53(31) 5051-5059   Aug 2014   [Refereed]
CugP is a novel ubiquitous non-GalU-type bacterial UDP-glucose pyrophosphorylases found in cyanobacteria.
[責任著者]Masahiko Ikeuchi [共著者]Kaisei Maeda,Rei Narikawa
J. Bacteriol.   196(13) 2348-2354   Jul 2014   [Refereed]
Attachment of phycobilisomes in an antenna-photosystem I supercomplex of cyanobacteria.
[責任著者]Masahiko Ikeuchi [共著者]Mai Watanabe, Dmitry A. Semchonok,Mariam T. Webber-Birungi, Shigeki Ehira,Kumiko Kondo, Rei Narikawa,Masayuki Ohmori,Egbert J. Boekema
Proc. Natl. Acad. Sci. U. S. A.   111(7) 2512-2517   Feb 2014   [Refereed]
Photoconversion Mechanism of the Second GAF Domain of Cyanobacteriochrome AnPixJ and the Cofactor Structure of Its Green-Absorbing State
[責任著者]Peter Hildebrandt [共著者]Francisco Velazquez Escobar,Tillmann Utesch,Rei Narikawa,Masahiko Ikeuchi,Maria Andrea Mroginski, Wolfgang Gärtner
Biochemistry   52(29) 4871-4880   Jun 2013   [Refereed]
DNA replication depends on photosynthetic electron transport in cyanobacteria
[責任著者]Hirofumi Yoshikawa [共著者]Ryudo Ohbayashi,Satoru Watanabe, Yu Kanesaki,Rei Narikawa,Taku Chibazakura,Masahiko Ikeuchi
FEMS Micorbiol. Lett.   344(2) 138-144   Jun 2013   [Refereed]
Light-independent biosynthesis and assembly of the photosystem II complex in the diatom Chaetoceros gracilis
[責任著者]Ryo Nagao [共著者]Tatsuya Tomo,Rei Narikawa,Isao Enami,Masahiko Ikeuchi
FEBS Lett.   587(9) 1340-1345   May 2013   [Refereed]
Green/red cyanobacteriochromes regulate complementary chromatic acclimation via a protochromic photocycle.
[責任著者]Masahiko Ikeuchi [共著者]Yuu Hirose,Nathan C. Rockwell,Kaori Nishiyama, Rei Narikawa,Yutaka Ukaji, Katsuhiko Inomata,J. Clark Lagarias
Proc. Natl. Acad. Sci. U. S. A.   110(13) 4974-4979   Mar 2013   [Refereed]
Structures of cyanobacteriochromes from phototaxis regulators AnPixJ and TePixJ reveal general and specific photoconversion mechanism.
[責任著者]Masahiko Ikeuchi [共著者]Rei Narikawa,Takami Ishizuka,Norifumi Muraki,Tomoo Shiba,Genji Kurisu
Proc. Natl. Acad. Sci. U. S. A.   110(3) 918-923   Jan 2013   [Refereed]
Proteases are associated with a minor fucoxanthin chlorophyll a/c-binding protein from the diatom, Chaetoceros gracilis.
[責任著者]Ryo Nagao [共著者]Tatsuya Tomo, Eri Noguchi,Takehiro Suzuki, Akinori Okumura,Rei Narikawa,Isao Enami,Masahiko Ikeuchi
Biochim. Biophys. Acta   1817(12) 2110-2117   Dec 2012   [Refereed]
Phycobilisome model with novel skeleton-like structures in a glaucocystophyte Cyanophora paradoxa.
[責任著者]Masahiko Ikeuchi [共著者]Mai Watanabe,Momoko Sato,Kumiko Kondo,Rei Narikawa
Biochim. Biophys. Acta   1817(8) 1428-1435   Aug 2012   [Refereed]
Thiol-based photocycle of the blue and teal light-sensing cyanobacteriochrome Tlr1999.
[責任著者]Masahiko Ikeuchi [共著者]Gen Enomoto,Yuu Hirose,Rei Narikawa
Biochemistry   51(14) 3050-3058   Apr 2012   [Refereed]
A deletion mutation in the spacing within the psaA core promoter enhances transcription in a cyanobacterium Synechocystis sp. PCC 6803.
[責任著者]Masahiko Ikeuchi [共著者]Takafumi Midorikawa,Rei Narikawa
Plant Cell Physiol.   53(1) 164-172   Jan 2012   [Refereed]
Novel photosensory two-component system (PixA-NixB-NixC) involved in the regulation of positive and negative phototaxis of cyanobacterium Synechocystis sp. PCC 6803.
[責任著者]Rei Narikawa [共著者]Fumiko Suzuki,Shizue Yoshihara,Sho-ichi Higashi,Masakatsu Watanabe,Masahiko Ikeuchi
Plant Cell Physiol.   52(12) 2214-2224   Dec 2011   [Refereed]
Photoconversion mechanism of a green/red photosensory cyanobacteriochrome AnPixJ: time-resolved optical spectroscopy and FTIR analysis of the AnPixJ-GAF2 domain.
[責任著者]Shigeru Itoh [共著者]Yoshimasa Fukushima,Masayo Iwaki,Rei Narikawa,Masahiko Ikeuchi,Yusuke Tomita
Biochemistry   50(29) 6328-6339   Jul 2011   [Refereed]
Cellulose accumulation and a cellulose synthase gene are responsible for cell aggregation in the cyanobacterium Thermosynechococcus vulcanus RKN.
[責任著者]Masahiko Ikeuchi [共著者]Yusuke Kawano,Toshiyuki Saotome,Yuriko Ochiai,Mitsunori Katayama,Rei Narikawa
Plant Cell Physiol.   52(6) 957-966   Jun 2011   [Refereed]
The cyanobacteriochrome, TePixJ, isomerizes its own chromophore by converting phycocyanobilin to phycoviolobilin.
[責任著者]Masahiko Ikeuchi [共著者]Takami Ishizuka,Ayumi Kamiya, Hiroyuki Suzuki,Hiroyuki Suzuki,Rei Narikawa, Takumi Noguchi,Takayuki Kohchi, Katsuhiko Inomata
Biochemistry   50(6) 953-961   Feb 2011   [Refereed]
Novel supercomplex organization of photosystem I in Anabaena and Cyanophora paradoxa.
[責任著者]Masahiko Ikeuchi [共著者]Mai Watanabe,Hisako Kubota,Hajime Wada,Rei Narikawa
Plant Cell Physiol.   52(1) 162-168   Jan 2011   [Refereed]
Cyanobacteriochrome CcaS regulates phycoerythrin accumulation in Nostoc punctiforme, a group II chromatic adapter.
[責任著者]Masahiko Ikeuchi [共著者]Yuu Hirose,Rei Narikawa,Mitsunori Katayama
Proc. Natl. Acad. Sci. U. S. A.   107(19) 8854-8859   May 2010   [Refereed]
Genomic structure of an economically important cyanobacterium, Arthrospira (Spirulina) platensis NIES-39.
[責任著者]Masayuki Ohmori [共著者]Takatomo Fujisawa,Rei Narikawa,Shibobu Okamoto,Shigeki Ehira,Masahiko Ikeuchi
DNA Res.   17(2) 85-103   Apr 2010   [Refereed]
An Rrf2-type transcriptional regulator is required for expression of psaAB genes in the cyanobacterium Synechocystis sp. PCC 6803.
[責任著者]Masahiko Ikeuchi [共著者]Takafumi Midorikawa,Kouji Matsumoto,Rei Narikawa
Plant Physiol.   151(2) 882-892   Oct 2009   [Refereed]
Is the photosystem II complex a monomer or a dimer?
[責任著者]Masahiko Ikeuchi [共著者]Mai Watanabe,Masako Iwai,Rei Narikawa
Plant Cell Physiol.   50(9) 1674-1680   Sep 2009   [Refereed]
Crystallization and preliminary X-ray studies of the chromophore-binding domain of cyanobacteriochrome AnPixJ from Anabaena sp. PCC 7120.
[責任著者]Genji Kurisu [共著者]Rei Narikawa,Norifumi Muraki,Tomoo Shiba,Masahiko Ikeuchi
Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun.   65(2) 159-162   Jan 2009   [Refereed]
Characterization of the photoactive GAF domain of the CikA homolog (SyCikA, Slr1969) of the cyanobacterium Synechocystis sp. PCC 6803.
[責任著者]Rei Narikawa [共著者]Takayuki Kohchi,Masahiko Ikeuchi
Photochem. Photobiol. Sci.   7(10) 1253-1259   Oct 2008   [Refereed]
A novel photoactive GAF domain of cyanobacteriochrome AnPixJ that shows reversible green/red photoconversion.
[責任著者]Rei Narikawa [共著者]Yoshimasa Fukushima,Takami Ishizuka,Shigeru Itoh,Masahiko Ikeuchi
J. Mol. Biol.   380(5) 844-855   Aug 2008   [Refereed]
Cyanobacteriochrome CcaS is the green light receptor that induces the expression of phycobilisome linker protein.
[責任著者]Masahiko Ikeuchi [共著者]Yuu Hirose,Takashi Shimada,Rei Narikawa,Mitsunori Katayama
Proc. Natl. Acad. Sci. U. S. A.   105(28) 9528-9533   Jul 2008   [Refereed]
Cyanobacteriochrome TePixJ of Thermosynechococcus elongatus harbors phycoviolobilin as a chromophore.
[責任著者]Masahiko Ikeuchi [共著者]Takami Ishizuka,Rei Narikawa,Takayuki Kohchi,Mitsunori Katayama
Plant Cell Physiol.   48(9) 1385-1390   Sep 2007   [Refereed]
Three putative photosensory light, oxygen or voltage (LOV) domains with distinct biochemical properties from the filamentous cyanobacterium Anabaena sp. PCC 7120.
[責任著者]Masahiko Ikeuchi [共著者]Rei Narikawa,Kazunori Zikihara, Koji Okajima,Yuriko Ochiai, Mitsunori Katayama,Yoshinori Shichida,Satoru Tokutomi
Photochem. Photobiol.   82(6) 1627-1633   Dec 2006   [Refereed]
Molecular evolution of PAS domain-containing proteins of filamentous cyanobacteria through domain shuffling and domain duplication.
[責任著者]Masahiko Ikeuchi [共著者]Rei Narikawa,Shinobu Okamoto,Masayuki Ohmori
DNA Res.   11(2) 69-81   Apr 2004   [Refereed]
Use of segment-based microarray in the analysis of global gene expression in response to various environmental stresses in the cyanobacterium Anabaena sp. PCC 7120.
[責任著者]Naoki Sato [共著者]Masayuki Ohmori,Masahiko Ikeuchi,Kousuke Tashiro,Rei Narikawa,Satoshi Kuhara
J. Gen. Appl. Microbiol.   50(1) 1-8   Feb 2004   [Refereed]
Characterization of genes encoding multi-domain proteins in the genome of the filamentous nitrogen-fixing Cyanobacterium anabaena sp. strain PCC 7120.
[責任著者]Masayuki Ohmori [共著者]Masahiko Ikeuchi,Naoki Sato,Peter Wolk,Shinobu Okamoto,Rei Narikawa
DNA Res.   8(6) 271-284   Dec 2001   [Refereed]