山下明史 (Akifumi Yamashita) - マイポータル

基本情報

学位: 博士 (理学) 大阪大学(大阪大学)

J-GLOBAL ID: 201001007522665103
researchmap会員ID: 6000022575

外部リンク: http://db.tohoku.ac.jp/whois/detail/0e4cac50c55829de9a432c475f36f6d1.html

研究キーワード

経歴

東北大学大学院生命科学研究科助教

MISC

Highly conserved sequences for human neutralization epitope on hemagglutinin of influenza A viruses H3N2, H1N1 and H5N1: Implication for human monoclonal antibody recognition

Akifumi Yamashita, Norihito Kawashita, Ritsuko Kubota-Koketsu, Yuji Inoue, Yohei Watanabe, Madiha S. Ibrahim, Shoji Ideno, Mikihiro Yunoki, Yoshinobu Okuno, Tatsuya Takagi, Teruo Yasunaga, Kazuyoshi Ikuta

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 393(4) 614-618 2010年3月
Highly conserved sequences for human neutralization epitope on hemagglutinin of influenza A viruses H3N2, H1N1 and H5N1: Implication for human monoclonal antibody recognition

Akifumi Yamashita, Norihito Kawashita, Ritsuko Kubota-Koketsu, Yuji Inoue, Yohei Watanabe, Madiha S. Ibrahim, Shoji Ideno, Mikihiro Yunoki, Yoshinobu Okuno, Tatsuya Takagi, Teruo Yasunaga, Kazuyoshi Ikuta

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 393(4) 614-618 2010年3月
Full-Length Sequences of One Genotype 4 and Three Genotype 3 Hepatitis E Viruses in Fecal Samples from Domestic Swine in Japan.

Takeru Urayama, Sompong Sapsutthipas, Muneo Tsujikawa, Akifumi Yamashita, Hiromi Nishigaki, Madiha S. Ibrahim, Katsuro Hagiwara, Mikihiro Yunoki, Teruo Yasunaga, Teruhide Yamaguchi, Kazuyoshi Ikuta

The Open Veterinary Science Journal 4 11-19 2010年
Full-Length Sequences of One Genotype 4 and Three Genotype 3 Hepatitis E Viruses in Fecal Samples from Domestic Swine in Japan.

Takeru Urayama, Sompong Sapsutthipas, Muneo Tsujikawa, Akifumi Yamashita, Hiromi Nishigaki, Madiha S. Ibrahim, Katsuro Hagiwara, Mikihiro Yunoki, Teruo Yasunaga, Teruhide Yamaguchi, Kazuyoshi Ikuta

The Open Veterinary Science Journal 4 11-19 2010年
Direct Metagenomic Detection of Viral Pathogens in Nasal and Fecal Specimens Using an Unbiased High-Throughput Sequencing Approach

Shota Nakamura, Cheng-Song Yang, Naomi Sakon, Mayo Ueda, Takahiro Tougan, Akifumi Yamashita, Naohisa Goto, Kazuo Takahashi, Teruo Yasunaga, Kazuyoshi Ikuta, Tetsuya Mizutani, Yoshiko Okamoto, Michihira Tagami, Ryoji Morita, Norihiro Maeda, Jun Kawai, Yoshihide Hayashizaki, Yoshiyuki Nagai, Toshihiro Horii, Tetsuya Iida, Takaaki Nakaya

PLOS ONE 4(1) e4219- 2009年1月
Direct Metagenomic Detection of Viral Pathogens in Nasal and Fecal Specimens Using an Unbiased High-Throughput Sequencing Approach

Shota Nakamura, Cheng-Song Yang, Naomi Sakon, Mayo Ueda, Takahiro Tougan, Akifumi Yamashita, Naohisa Goto, Kazuo Takahashi, Teruo Yasunaga, Kazuyoshi Ikuta, Tetsuya Mizutani, Yoshiko Okamoto, Michihira Tagami, Ryoji Morita, Norihiro Maeda, Jun Kawai, Yoshihide Hayashizaki, Yoshiyuki Nagai, Toshihiro Horii, Tetsuya Iida, Takaaki Nakaya

PLOS ONE 4(1) e4219- 2009年1月
Computational search for over-represented 8-mers within the 5′-regulatory regions of 634 mouse testis-specific genes.

Yamashita A, Goto N, Nishiguchi S, Shimada K, Yamanishi H, Yasunaga T

Gene 427(1-2) 93-98 2008年12月
Computational search for over-represented 8-mers within the 5 '-regulatory regions of 634 mouse testis-specific genes

Akifumi Yamashita, Naohisa Goto, Seiji Nishiguchi, Kazunori Shimada, Hiromichi Yamanishi, Teruo Yasunaga

GENE 427(1-2) 93-98 2008年12月
In silico study of a novel gene evolved from an ancestral SVIP gene and highly expressed in the adult mouse testes

Momoko Yoshida, Akifumi Yamashita, Yoshiko Idoji, Seiji Nishiguchi, Kazunori Shimada, Teruo Yasunaga, Hiromichi Yamanishi

INTERNATIONAL JOURNAL OF MOLECULAR MEDICINE 22(2) 143-148 2008年8月
In silico study of a novel gene evolved from an ancestral SVIP gene and highly expressed in the adult mouse testes

Momoko Yoshida, Akifumi Yamashita, Yoshiko Idoji, Seiji Nishiguchi, Kazunori Shimada, Teruo Yasunaga, Hiromichi Yamanishi

INTERNATIONAL JOURNAL OF MOLECULAR MEDICINE 22(2) 143-148 2008年8月
In silico study of whey-acidic-protein domain containing oral protease inhibitors.

Idoji Y, Watanabe Y, Yamashita A, Yamanishi K, Nishiguchi S, Shimada K, Yasunaga T, Yamanishi H

Int. J. Mol. Med. 21 461-468 2008年
In silico study of whey-acidic-protein domain containing oral protease inhibitors.

Idoji Y, Watanabe Y, Yamashita A, Yamanishi K, Nishiguchi S, Shimada K, Yasunaga T, Yamanishi H

Int. J. Mol. Med. 21 461-468 2008年
Conservation of Nested genes in Eukaryote.

Shibasaki T, Yamashita A, Goto N, Shota N, Yasunaga T

The proceedings of the 2007 annual conference of the Japanese society for bioinformatics 2007年
Analysis of HERV-K replication mechanism in the human genome.

Kashiwada R, Yamashita A, Goto N, Shota N, Yasunaga T

The proceedings of the 2007 annual conference of the Japanese society for bioinformatics 2007年
Conservation of Nested genes in Eukaryote.

Shibasaki T, Yamashita A, Goto N, Shota N, Yasunaga T

The proceedings of the 2007 annual conference of the Japanese society for bioinformatics 2007年
Analysis of HERV-K replication mechanism in the human genome.

Kashiwada R, Yamashita A, Goto N, Shota N, Yasunaga T

The proceedings of the 2007 annual conference of the Japanese society for bioinformatics 2007年
Mapping Database of cDNA and Genome Designed to Use for Various Applications.

Ken Kurokawa, Teruo Yasunaga

Genome Informatics 14 418-419 2003年
Mapping Database of cDNA and Genome Designed to Use for Various Applications.

Ken Kurokawa, Teruo Yasunaga

Genome Informatics 14 418-419 2003年

講演・口頭発表等

Human neutralization epitope on hemagglutinin of influenza A viruses H3N2, H1N1 and H5N1: A possible target for alternative vaccine development

International Joint Forum on Infectious Diseases 2009年
抗H3N2ヒト型単クローン中和抗体が認識するエピトープ領域の保存性

第57回日本ウイルス学会学術集会 2009年
Detection of Tissue-Specific Genes and Computational Analysis of Testis-Specific Gene Expression Regulatory Regions.

The 20th International Conference on Genome Informatics 2009年
Human neutralization epitope on hemagglutinin of influenza A viruses H3N2, H1N1 and H5N1: A possible target for alternative vaccine development

International Joint Forum on Infectious Diseases 2009年
抗H3N2ヒト型単クローン中和抗体が認識するエピトープ領域の保存性

第57回日本ウイルス学会学術集会 2009年
Detection of Tissue-Specific Genes and Computational Analysis of Testis-Specific Gene Expression Regulatory Regions.

The 20th International Conference on Genome Informatics 2009年
Mapping Database of cDNA and Genome Designed to Use for Various Applications

The 14th International Conference on Genome Informatics 2003年
Mapping Database of cDNA and Genome Designed to Use for Various Applications

The 14th International Conference on Genome Informatics 2003年

所属学協会

共同研究・競争的資金等の研究課題

メタゲノム情報解析

共同研究 2009年 - 2011年
Analysis of metagenome data

Cooperative Research 2009年 - 2011年
遺伝子情報解析

2006年 - 2008年
DNAまたはペプチドのコンピュータを使った配列解析
In silico analysis of DNA and/or protein sequence.