論文

査読有り
2016年8月

Intrinsic disorder accelerates dissociation rather than association

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
  • Koji Umezawa
  • ,
  • Jun Ohnuki
  • ,
  • Junichi Higo
  • ,
  • Mitsunori Takano

84
8
開始ページ
1124
終了ページ
1133
記述言語
英語
掲載種別
研究論文(学術雑誌)
DOI
10.1002/prot.25057
出版者・発行元
WILEY

The intrinsically disordered protein (IDP) has distinct properties both physically and biologically: it often becomes folded when binding to the target and is frequently involved in signal transduction. The physical property seems to be compatible with the biological property where fast association and dissociation between IDP and the target are required. While fast association has been well studied, fueled by the fly-casting mechanism, the dissociation kinetics has received less attention. We here study how the intrinsic disorder affects the dissociation kinetics, as well as the association kinetics, paying attention to the interaction strength at the binding site (i.e., the quality of the "fly lure"). Coarse-grained molecular dynamics simulation of the pKID-KIX system, a well-studied IDP system, shows that the association rate becomes larger as the disorder-inducing flexibility that was imparted to the model is increased, but the acceleration is marginal and turns into deceleration as the quality of the fly lure is worsened. In contrast, the dissociation rate is greatly enhanced as the disorder is increased, indicating that intrinsic disorder serves for rapid signal switching more effectively through dissociation than association. (C) 2016 Wiley Periodicals, Inc.

リンク情報
DOI
https://doi.org/10.1002/prot.25057
Web of Science
https://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=JSTA_CEL&SrcApp=J_Gate_JST&DestLinkType=FullRecord&KeyUT=WOS:000382817000009&DestApp=WOS_CPL
ID情報
  • DOI : 10.1002/prot.25057
  • ISSN : 0887-3585
  • eISSN : 1097-0134
  • Web of Science ID : WOS:000382817000009

エクスポート
BibTeX RIS