論文

査読有り
2001年10月

Molecular motors: thermodynamics and the random walk

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
  • N Thomas
  • ,
  • Y Imafuku
  • ,
  • K Tawada

268
1481
開始ページ
2113
終了ページ
2122
記述言語
英語
掲載種別
研究論文(学術雑誌)
DOI
10.1098/rspb.2001.1764
出版者・発行元
ROYAL SOC

The biochemical cycle of a molecular motor provides the essential link between its thermodynamics and kinetics. The thermodynamics of the cycle determine the motor's ability to perform mechanical work, whilst the kinetics of the cycle govern its stochastic behaviour. We concentrate here on tightly coupled, processive molecular motors, such as kinesin and myosin V, which hydrolyse one molecule of ATP per forward step. Thermodynamics require that, when such a motor pulls against a constant load f, the ratio of the forward and backward products of the rate constants for its cycle is exp[-(DeltaG + u(0)f)/kT], where -DeltaG is the free energy available from ATP hydrolysis and u(0) is the motor's step size. A hypothetical one-state motor can therefore act as a chemically driven ratchet executing a biased random walk. Treating this random walk as a diffusion problem, we calculate the forward velocity upsilon and the diffusion coefficient D and we find that its randomness parameter r is determined solely by thermodynamics. However, real molecular motors pass through several states at each attachment site. They satisfy a modified diffusion equation that follows directly from the rate equations for the biochemical cycle and their effective diffusion coefficient is reduced to D-upsilon2-tau, where tau is the time-constant for the motor to reach the steady state. Hence, the randomness of multistate motors is reduced compared with the one-state case and can be used for determining iota. Our analysis therefore demonstrates the intimate relationship between the biochemical cycle, the force-velocity relation and the random motion of molecular motors.

リンク情報
DOI
https://doi.org/10.1098/rspb.2001.1764
Web of Science
https://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=JSTA_CEL&SrcApp=J_Gate_JST&DestLinkType=FullRecord&KeyUT=WOS:000171850100005&DestApp=WOS_CPL
ID情報
  • DOI : 10.1098/rspb.2001.1764
  • ISSN : 0962-8452
  • Web of Science ID : WOS:000171850100005

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