Sato, Kengo

J-GLOBAL         Last updated: Aug 24, 2019 at 03:02
 
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Name
Sato, Kengo
Affiliation
Keio University
Section
Faculty of Science and Technology Department of Biosciences and Informatics
Job title
Assistant Professor/Senior Assistant Professor
Degree
Ph.D.(Keio University)
Research funding number
20365472

Research Areas

 
 

Academic & Professional Experience

 
Apr 2003
 - 
Mar 2006
Instructor, Department of Biosciences and Informatics, Keio University
 
Apr 2006
 - 
Oct 2009
Researcher, Japan Biological Infomatics Consortium
 
Apr 2006
 - 
Mar 2015
Visiting Researcher, Computational Biology Research Center, National Institute of Advanced Industrial Science and Technology
 
Nov 2009
 - 
Mar 2011
Assistant Professor, Department of Computational Biology, Graduate School of Frontier Sciences, University of Tokyo
 
Apr 2011
 - 
Mar 2014
Assistant Professor, Department of Biosciences and Informatics, Keio University
 

Education

 
Apr 1991
 - 
Mar 1995
Department of Mathematics, Faculty of Science and Technology, Keio University
 
Apr 1995
 - 
Mar 1997
Department of Computer Science, Graduate School of Science and Technology, Keio University
 
Apr 1997
 - 
Mar 2003
School of Science for Open and Environmental Systems, Graduate School of Science and Technology, Keio University
 

Committee Memberships

 
Apr 2018
 - 
Today
IPSJ SIGBIO  Steering Committee Member
 
Apr 2018
 - 
Dec 2018
International Conference on Genome Informatics (GIW) 2018  Program Committee Co-Chair
 
Apr 2017
 - 
Today
IPSJ Transactions on Bioinformatics  Editor
 
Oct 2016
 - 
Jan 2018
Asia Pacific Bioinformatics Conference (APBC) 2018  Local Organizing Committee Co-Chair
 
Jan 2016
 - 
Oct 2016
日本バイオインフォマティクス学会  2016年度生命医薬情報学連合大会実行委員
 

Awards & Honors

 
Sep 2017
RNA secondary structure prediction using deep learning, ポスター賞, 日本バイオインフォマティクス学会
Winner: Akiyama, M., Sakakibara, Y., Sato, K.
 
Oct 2016
Improving RNA secondary structure prediction with weak label learning from NGS data, 研究奨励賞, 日本バイオインフォマティクス学会
Winner: Akiyama, M., Sakakibara, Y., Sato, K.
 
Mar 2013
RNA structural alignments via dual decomposition, IPSJ Yamashita SIG Research Award, 情報処理学会
Winner: Sato Kengo
 
Dec 2008
A non-parametric Bayesian approach for predicting RNA secondary structures, Oxford University Press JSBi Prize, 日本バイオインフォマティクス学会
Winner: Sato Kengo
 

Published Papers

 
医師国家試験自動解答プログラムの治療薬問題への拡張
水口達矢, 伊藤詩乃, 佐藤健吾, 榊原康文
人工知能学会論文誌      2018   [Refereed]
Convolutional neural network based on SMILES representation of compounds for detecting chemical motif
Hirohara, M., Saito, Y., Koda, Y., Sato, K., Sakakibara, Y.
BMC Bioinformatics      2018   [Refereed]
A max-margin training of RNA secondary structure prediction integrated with the thermodynamic model
Akiyama, M., Sato, K., Sakakibara, Y.
Journal of Bioinformatics and Computational Biology      2018   [Refereed]
Aoto, Yoshimasa, Hachiya, Tsuyoshi, Okumura, Kazuhiro, Hase, Sumitaka, Sato, Kengo, Wakabayashi, Yuichi, Sakakibara, Yasubumi
PLOS ONE   12(11)    Nov 2017
Kato, Yuki, Mori, Tomoya, Sato, Kengo, Maegawa, Shingo, Hosokawa, Hiroshi, Akutsu, Tatsuya
BIOINFORMATICS   33(2) 202-209   Jan 2017   [Refereed]

Misc

 
機能性RNAの配列解析と構造解析
榊原康文,佐藤健吾
人工知能学会誌   22(1) 54-62   Jan 2007   [Invited]

Books etc

 
Sato Kengo (Part:Contributor, 第2章)
慶應義塾大学出版会   Aug 2015   ISBN:978-4-7664-2251-1
Readings in Japanese Natural Language Processing
Nobesawa, H.S., Sano, T., Sato, K., Saito, H. (Part:Contributor, Domain-specific statistical data for morphological analysis)
CSLI Publications   2015   
Algorithmic Bioprocesses
Sakakibara, Y., Sato, K. (Part:Contributor, Sequence and Structural Analyses for Functional non-coding RNAs)
Springer   Aug 2009   
実験医学増刊「生命科学の最先端に役立つバイオデータベースとウェブツール総集編」
佐藤健吾, 榊原康文 (Part:Contributor, 二次構造に基づく機能性RNAの配列解析)
羊土社   Aug 2008   
Grammatical Inference: Algorithms and Applications, Lecture Notes in Computer Science
Yasubumi Sakakibara; Satoshi Kobayashi; Kengo Sato; Tetsuro Nishino; Etsuji Tomita (Part:Editor)
Springer   2006   

Conference Activities & Talks

 
深層学習に基づく RNA グアニン4重鎖構造識別法の検討
加藤有己, 佐藤健吾, Jakob Hull Havgaard, 河原行郎
第20回日本RNA学会年会   Jul 2018   
RNA secondary structure prediction using deep learning
Akiyama, M., Sakakibara, Y., Sato, K.
第6回生命医薬情報学連合大会,日本バイオインフォマティクス学会2017年年会   Sep 2017   
がん細胞株における derived RNA のプロファイル解析
青木言太,土谷麻里子,小坂威雄,長谷純崇,佐藤健吾,水野隆一,大家基嗣,榊原康文
第19回日本RNA学会年会   Jul 2017   
深層学習によるRNA二次構造予測
秋山真那斗,榊原康文,佐藤健吾
第19回日本RNA学会年会   Jul 2017   
医師国家試験自動解答プログラムの治療薬問題への拡張
水口達矢,伊藤詩乃,佐藤健吾,榊原康文
第31回人工知能学会全国大会   May 2017   

Research Grants & Projects

 
GenomeGAN: 敵対的生成ネットワークによるインシリコゲノム合成
MEXT,JSPS: Grant-in-Aid for Scientific Research
Project Year: Jun 2019 - Mar 2021    Investigator(s): 佐藤 健吾
RNA secondary structure prediction using nanopore sequencers
MEXT,JSPS: Grant-in-Aid for Scientific Research
Project Year: Apr 2019 - Mar 2022    Investigator(s): 佐藤 健吾
次世代シークエンシングデータを利用した機械学習によるRNA二次構造予測の高精度化
MEXT,JSPS: Grant-in-Aid for Scientific Research
Project Year: Apr 2016 - Mar 2019    Investigator(s): 佐藤 健吾