© 2019, © 2019 Atomic Energy Society of Japan. All rights reserved. In a variety of highly enriched uranium cores of Kyoto University Critical Assembly, many different subcriticality measurements have been strenuously performed. However, any influence of neutron source inherent in the highly enriched uranium fuels on these measurements has hardly been studied. This is because the influence has been expected to be negligible in the fuels. In this study, we revaluated the influence on pulsed neutron, accelerator-beam trip and rod drop measurements to reveal an unexpected impact of the weak inherent source. Especially, the inherent source was injurious to most of the beam trip and the rod drop measurements based on the integral count method. The least-squares inverse kinetics analysis also had a significant influence on the inherent source. In the area ratio analysis for a pulsed neutron measurement, a considerable number of neutrons from the inherent source was mixed into delayed-neutron area. When the influence was considered in these data analyses, the subcritical reactivity of the above measurements was in good agreement with that calculated by the continuous-energy Monte Carlo code MVP.