論文

査読有り 国際誌
2020年10月16日

The genome sequence of Samia ricini, a new model species of lepidopteran insect

Molecular Ecology Resources
  • Jung Lee
  • ,
  • Tomoaki Nishiyama
  • ,
  • Shuji Shigenobu
  • ,
  • Katsushi Yamaguchi
  • ,
  • Yutaka Suzuki
  • ,
  • Toru Shimada
  • ,
  • Susumu Katsuma
  • ,
  • Takashi Kiuchi

21
1
開始ページ
327
終了ページ
339
記述言語
英語
掲載種別
研究論文(学術雑誌)
DOI
10.1111/1755-0998.13259
出版者・発行元
Wiley

Samia ricini, a gigantic saturniid moth, has the potential to be a novel lepidopteran model species. Samia ricini is far more resistant to diseases than the current model species Bombyx mori, and therefore can be more easily reared. In addition, genetic resources available for S. ricini rival those for B. mori: at least 26 ecoraces of S. ricini are reported and S. ricini can hybridize with wild Samia species, which are distributed throughout Asian countries, and produce fertile progenies. Physiological traits such as food preference, integument colour and larval spot pattern differ among S. ricini strains and wild Samia species so that those traits can be targeted in forward genetic analyses. To facilitate genetic research in S. ricini, we determined its whole genome sequence. The assembled genome of S. ricini was 458 Mb with 155 scaffolds, and the scaffold N50 length of the assembly was ~ 21 Mb. In total, 16,702 protein coding genes were predicted. While the S. ricini genome was mostly collinear with that of B. mori with some rearrangements and few S. ricini-specific genes were discovered, chorion genes and fibroin genes seemed to have expanded in the S. ricini lineage. As the first step of genetic analyses, causal genes for "Blue," "Yellow," "Spot," and "Red cocoon" phenotypes were mapped to chromosomes.

リンク情報
DOI
https://doi.org/10.1111/1755-0998.13259
PubMed
https://www.ncbi.nlm.nih.gov/pubmed/32985129
URL
https://onlinelibrary.wiley.com/doi/pdf/10.1111/1755-0998.13259
URL
https://onlinelibrary.wiley.com/doi/full-xml/10.1111/1755-0998.13259
ID情報
  • DOI : 10.1111/1755-0998.13259
  • ISSN : 1755-098X
  • eISSN : 1755-0998
  • PubMed ID : 32985129

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