大久保卓 (Takashi Okubo) - マイポータル

基本情報

J-GLOBAL ID: 201401067381566850
researchmap会員ID: B000242433

論文

Sulfur Fertilization Changes the Community Structure of Rice Root-, and Soil-Associated Bacteria

Sachiko Masuda, Zhihua Bao, Takashi Okubo, Kazuhiro Sasaki, Seishi Ikeda, Ryo Shinoda, Mizue Anda, Ryuji Kondo, Yumi Mori, Kiwamu Minamisawa

MICROBES AND ENVIRONMENTS 31(1) 70-75 2016年3月査読有り
Are Symbiotic Methanotrophs Key Microbes for N Acquisition in Paddy Rice Root?

Kiwamu Minamisawa, Haruko Imaizumi-Anraku, Zhihua Bao, Ryo Shinoda, Takashi Okubo, Seishi Ikeda

MICROBES AND ENVIRONMENTS 31(1) 4-10 2016年3月査読有り
Draft Genome Sequences of Streptomyces scabiei S58, Streptomyces turgidiscabies T45, and Streptomyces acidiscabies a10, the Pathogens of Potato Common Scab, Isolated in Japan.

Tomihama T, Nishi Y, Sakai M, Ikenaga M, Okubo T, Ikeda S

Genome announcements 4(2) 2016年査読有り
The Type III Secretion System (T3SS) is a Determinant for Rice-Endophyte Colonization by Non-Photosynthetic Bradyrhizobium

Pongdet Piromyou, Pongpan Songwattana, Teerana Greetatorn, Takashi Okubo, Kaori Chiba Kakizaki, Janpen Prakamhang, Panlada Tittabutr, Nantakorn Boonkerd, Neung Teaumroong, Kiwamu Minamisawa

MICROBES AND ENVIRONMENTS 30(4) 291-300 2015年12月査読有り
Bacterial clade with the ribosomal RNA operon on a small plasmid rather than the chromosome

Mizue Anda, Yoshiyuki Ohtsubo, Takashi Okubo, Masayuki Sugawara, Yuji Nagata, Masataka Tsuda, Kiwamu Minamisawa, Hisayuki Mitsui

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 112(46) 14343-14347 2015年11月査読有り
Symbiosis Island Shuffling with Abundant Insertion Sequences in the Genomes of Extra-Slow-Growing Strains of Soybean Bradyrhizobia

Takayuki Iida, Manabu Itakura, Mizue Anda, Masayuki Sugawara, Tsuyoshi Isawa, Takashi Okubo, Shusei Sato, Kaori Chiba-Kakizaki, Kiwamu Minamisawa

APPLIED AND ENVIRONMENTAL MICROBIOLOGY 81(12) 4143-4154 2015年6月査読有り
Preferential Association of Endophytic Bradyrhizobia with Different Rice Cultivars and Its Implications for Rice Endophyte Evolution

Pongdet Piromyou, Teerana Greetatorn, Kamonluck Teamtisong, Takashi Okubo, Ryo Shinoda, Achara Nuntakij, Panlada Tittabutr, Nantakorn Boonkerd, Kiwamu Minamisawa, Neung Teaumroong

APPLIED AND ENVIRONMENTAL MICROBIOLOGY 81(9) 3049-3061 2015年5月査読有り
Genome Analysis of a Novel Bradyrhizobium sp DOA9 Carrying a Symbiotic Plasmid

Shin Okazaki, Rujirek Noisangiam, Takashi Okubo, Takakazu Kaneko, Kenshiro Oshima, Masahira Hattori, Kamonluck Teamtisong, Pongpan Songwattana, Panlada Tittabutr, Nantakorn Boonkerd …

PLOS ONE 10(2) e0117392 2015年2月査読有り
Insecticide-Degrading Burkholderia Symbionts of the Stinkbug Naturally Occupy Various Environments of Sugarcane Fields in a Southeast Island of Japan

Kanako Tago, Takashi Okubo, Hideomi Itoh, Yoshitomo Kikuchi, Tomoyuki Hori, Yuya Sato, Atsushi Nagayama, Kentaro Hayashi, Seishi Ikeda, Masahito Hayatsu

MICROBES AND ENVIRONMENTS 30(1) 29-36 2015年査読有り
Environmental Factors Shaping the Community Structure of Ammonia-Oxidizing Bacteria and Archaea in Sugarcane Field Soil

Kanako Tago, Takashi Okubo, Yumi Shimomura, Yoshitomo Kikuchi, Tomoyuki Hori, Atsushi Nagayama, Masahito Hayatsu

MICROBES AND ENVIRONMENTS 30(1) 21-28 2015年査読有り
Characterization of leaf blade- and leaf sheath-associated bacterial communities and assessment of their responses to environmental changes in CO₂, temperature, and nitrogen levels under field conditions.

Ikeda S, Tokida T, Nakamura H, Sakai H, Usui Y, Okubo T, Tago K, Hayashi K, Sekiyama Y, Ono H …

Microbes and environments / JSME 30(1) 51-62 2015年査読有り
Metagenomic Analysis of the Bacterial Community Associated with the Taproot of Sugar Beet

Hirohito Tsurumaru, Takashi Okubo, Kazuyuki Okazaki, Megumi Hashimoto, Kaori Kakizaki, Eiko Hanzawa, Hiroyuki Takahashi, Noriyuki Asanome, Fukuyo Tanaka, Yasuyo Sekiyama …

MICROBES AND ENVIRONMENTS 30(1) 63-69 2015年査読有り
Elevated atmospheric CO2 levels affect community structure of rice root-associated bacteria

Okubo, Takashi, Liu, Dongyan, Tsurumaru, Hirohito, Ikeda, Seishi, Asakawa, Susumu, Tokida, Takeshi, Tago, Kanako, Hayatsu, Masahito, Aoki, Naohiro, Ishimaru, Ken …

Frontiers in Microbiology 6 136 2015年査読有り
A Fine-Scale Phylogenetic Analysis of Free-Living Burkholderia Species in Sugarcane Field Soil

Kanako Tago, Hideomi Itoh, Yoshitomo Kikuchi, Tomoyuki Hori, Yuya Sato, Atsushi Nagayama, Takashi Okubo, Ronald Navarro, Tomo Aoyagi, Kentaro Hayashi …

MICROBES AND ENVIRONMENTS 29(4) 434-437 2014年12月査読有り
The nitrate-sensing NasST system regulates nitrous oxide reductase and periplasmic nitrate reductase in Bradyrhizobium japonicum

Cristina Sanchez, Manabu Itakura, Takashi Okubo, Takashi Matsumoto, Hirofumi Yoshikawa, Aina Gotoh, Masafumi Hidaka, Takafumi Uchida, Kiwamu Minamisawa

ENVIRONMENTAL MICROBIOLOGY 16(10) 3263-3274 2014年10月査読有り
Phylogeny and Functions of Bacterial Communities Associated with Field-Grown Rice Shoots

Takashi Okubo, Seishi Ikeda, Kazuhiro Sasaki, Kenshiro Ohshima, Masahira Hattori, Tadashi Sato, Kiwamu Minamisawa

MICROBES AND ENVIRONMENTS 29(3) 329-332 2014年9月査読有り
Metaproteomic Identification of Diazotrophic Methanotrophs and Their Localization in Root Tissues of Field-Grown Rice Plants

Zhihua Bao, Takashi Okubo, Kengo Kubota, Yasuhiro Kasahara, Hirohito Tsurumaru, Mizue Anda, Seishi Ikeda, Kiwamu Minamisawa

APPLIED AND ENVIRONMENTAL MICROBIOLOGY 80(16) 5043-5052 2014年8月査読有り
Low Nitrogen Fertilization Adapts Rice Root Microbiome to Low Nutrient Environment by Changing Biogeochemical Functions

Seishi Ikeda, Kazuhiro Sasaki, Takashi Okubo, Akifumu Yamashita, Kimihiro Terasawa, Zhihua Bao, Dongyan Liu, Takeshi Watanabe, Jun Murase, Susumu Asakawa …

MICROBES AND ENVIRONMENTS 29(1) 50-59 2014年4月査読有り
A Rice Gene for Microbial Symbiosis, Oryza sativa CCaMK, Reduces CH4 Flux in a Paddy Field with Low Nitrogen Input

Bao, Zhihua, Watanabe, Aya, Sasaki, Kazuhiro, Okubo, Takashi, Tokida, Takeshi, Liu, Dongyan, Ikeda, Seishi, Imaizumi-Anraku, Haruko, Asakawa, Susumu, Sato, Tadashi …

Applied and Environmental Microbiology 80(6) 1995-2003 2014年査読有り
An assessment of the diversity of culturable bacteria from main root of sugar beet.

Kazuyuki Okazaki, Takao Iino, Yosuke Kuroda, Kazunori Taguchi, Hiroyuki Takahashi, Takuji Ohwada, Hiroto Tsurumaru, Takashi Okubo, Kiwamu Minamisawa, Seishi Ikeda

Microbes and environments 29(2) 220-3 2014年査読有り

もっとみる

講演・口頭発表等

メタン酸化が駆動する水田の微生物食物連鎖の構造は根圏と非根圏で異なる

日比野優子, 常田岳志, 大久保卓, 荒井見和, 林健太郎, 酒井英光, 長谷川利拡, 村瀬潤

日本微生物生態学会３１回横須賀大会 2016年10月
リボソームRNAオペロンが染色体に存在しない細菌の発見

按田瑞恵, 大坪嘉行, 大久保卓, 菅原雅之, 永田裕二, 津田雅孝, 南澤究, 三井久幸

第4回 RIBOSOME MEETING 2016年9月
開放系大気CO2増加実験におけるタカナリの栽培が水田土壌アセチレン還元活性におよぼす影響

八島(松島)未和, 中村長流, 田場秀卓, 永野博彦, 林健太郎, 常田岳志, 荒井見和, 大久保卓, 中村浩史, 臼井靖浩, 長谷川利拡

2016年度日本土壌肥料学会佐賀大会 2016年9月
Effects of FACE and N fertilizer treatments on CH4 production and oxidation in a rice paddy determined by an oxidation inhibitor technique

FACEing the future food production and ecosystems 2016年9月
Plant-associated Aureimonas with the sole rRNA operon on a tiny plasmid

Mizue Anda, Yoshiyuki Ohtsubo, Takashi Okubo, Masayuki Sugawara, Yuji Nagata, Masataka Tsuda, Seishi Ikeda, Shima Eda, Hisayuki Mitsui, ○Kiwamu Minamisawa

16th International Symposium on Microbial Ecology 2016年8月