Tatsuya Ota

Profile Information

Affiliation: Associate Professor, School of Advanced Sciences Department of Evolutionary Studies of Biosystems, The Graduate University for Advanced Studies

J-GLOBAL ID: 200901027513093504
researchmap Member ID: 1000293301

External link: https://rcies.soken.ac.jp/labs/ota/

専門：分子進化学。研究概要：免疫や生殖などの生物システムの分子進化。

Research Interests

Research Areas

Research History

Apr, 2023 - Present

The Graduate University for Advanced Studies
Apr, 2022 - Present

The Graduate University for Advanced Studies
Apr, 2007 - Mar, 2023

Associate Professor, Department of Evolutionary Studies of Biosystems, The Graduate University for Advanced Studies
Jul, 2015 - Jun, 2019

The Graduate University for Advanced Studies
Apr, 2013 - Jun, 2015

Director, Information Services and Technology Center, The Graduate University for Advanecd Studies
Oct, 2006 - Mar, 2013

The Graduate University for Advanced Studies
Apr, 2006 - Mar, 2007

The Graduate University for Advanced Studies
Apr, 1999 - Mar, 2006

The Graduate University for Advanced Studies

Professional Memberships

Major Papers

Genome sequencing reveals the genetic architecture of heterostyly and domestication history of common buckwheat

Jeffrey A. Fawcett, Ryoma Takeshima, Shinji Kikuchi, Euki Yazaki, Tomoyuki Katsube-Tanaka, Yumei Dong, Meifang Li, Harriet V. Hunt, Martin K. Jones, Diane L. Lister …

Nature Plants, Aug 10, 2023 Peer-reviewedCorresponding author
The bowfin genome illuminates the developmental evolution of ray-finned fishes

Andrew W. Thompson, M. Brent Hawkins, Elise Parey, Dustin J. Wcisel, Tatsuya Ota, Kazuhiko Kawasaki, Emily Funk, Mauricio Losilla, Olivia E. Fitch, Qiaowei Pan …

Nature Genetics, 53 1373-1384, Aug 30, 2021 Peer-reviewed
The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons

Ingo Braasch, Andrew R. Gehrke, Jeramiah J. Smith, Kazuhiko Kawasaki, Tereza Manousaki, Jeremy Pasquier, Angel Amores, Thomas Desvignes, Peter Batzel, Julian Catchen …

NATURE GENETICS, 48(4) 427-437, Apr, 2016 Peer-reviewed
The African coelacanth genome provides insights into tetrapod evolution.

Chris T Amemiya, Jessica Alföldi, Alison P Lee, Shaohua Fan, Hervé Philippe, Iain Maccallum, Ingo Braasch, Tereza Manousaki, Igor Schneider, Nicolas Rohner …

Nature, 496(7445) 311-316, Apr 18, 2013 Peer-reviewed
Lineage-restricted retention of a primitive immunoglobulin heavy chain isotype within the Dipnoi reveals an evolutionary paradox

T Ota, JP Rast, GW Litman, CT Amemiya

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 100(5) 2501-2506, Mar, 2003 Peer-reviewedLead author

Books and Other Publications

進化学事典 (日本進化学会編)

大田竜也 (Role: Contributor, 19.6 分子進化学、 19.7 塩基配列とアミノ酸配列データの解析)

共立出版, Apr, 2012 (ISBN: 9784320057777)
比較ゲノム学から読み解く生命システム基本概念から最新ゲノム情報まで（藤山秋佐夫監修）

大田竜也 (Role: Contributor, 第１６章進化系統樹－正しい読み方・書き方ガイダンス)

秀潤社, Sep, 2007 (ISBN: 9784879623607)
分子進化と分子系統学 (根井正利、Sudhir Kumar 共著、根井正利監訳・改訂)

大田竜也, 竹崎直子 (Role: Joint translator)

培風館, Jul, 2006
新移植免疫学（藤原大美編）

大田竜也, 笠原正典 (Role: Contributor, 第１章自己・非自己識別システムの進化)

中外医学社, Oct, 2000 (ISBN: 4498006569)
Weir's handbook of experimental immunology (Leonore A. Herzenberg, Donald M. Weir, Leonard A. Herzenberg, Caroline Blackwell (eds))

Tatsuya Ota (Role: Contributor, Chapter 8. Molecular evolution of immunoglobulin VH segments.)

Blackwell Science, 1997 (ISBN: 0865425728)
Nonmammalian genomic analysis: a practical guide (Bruce Birren, Eric Lai (eds))

Chris T. Amemiya, Tatsuya Ota, Gary W. Litman (Role: Contributor, Chapter 8. Construction of P1 artificial chromosome (PAC) libraries from lower vertebrates.)

Academic Press, 1996 (ISBN: 0121012859)
Current Topics on molecular evolution (Masatoshi Nei, Naoyuki Takahata (eds))

(Role: Contributor, Chapter 17. Organization and evolution of immunoglobulin genes, and identification of genes involved in regulation and ontogeny of the immune system.)

1995
Current Topics on molecular evolution (Masatoshi Nei, Naoyuki Takahata(eds))

(Role: Contributor, Chapter 16. Studies on the early evolution of immunoglobulin genes.)

1995
Genetics of cellular, individual, family and population variability (C.F. Sing and C.L. Hanis (eds))

(Role: Contributor, Chapter 16. Genetic variation and evolution of human populations.)

1993 (ISBN: 0195066251)
Evolution of life. Fossils, molecules, amd culture (Shozo Osawa, Tasuku Honjo (eds))

Masatoshi Nei, Tatsuya Ota (Role: Contributor, Chapter 4.4. Evolutionary relationships of human populations at the molecular level.)

Springer-Verlag, 1991 (ISBN: 0387700641)

Misc.

Searching for the genes responsible for heterostylous self-incompatibility in buckwheat - the detection of S-ELF3 gene

Yasuo Yasui, Masashi Mori, Jotaro Aii, Tomoko Abe, Daiki Matsumoto, Shingo Sato, Yoriko Hayashi, Ohmi Ohnishi, Tatsuya Ota

GENES & GENETIC SYSTEMS, 87(6) 399-399, Dec, 2012
Positional cloning of the genes determining heterostylous self-incompatibility in buckwheat

Tatsuya Ota, Masashi Mori, Mari Mori, Daiki Matsumoto, Ohmi Ohnishi, Clayton Campbell, Yasuo Yasui

GENES & GENETIC SYSTEMS, 81(6) 444-444, Dec, 2006

Presentations

Genome research on cultivated plants

Tatsuya Ota

2025 Schull Annual Conference In Mishima, Japan, Mar 15, 2025 Invited
Orphan Crop のゲノム解読と育種利用〜ソバ属を例に〜

竹島亮馬, Fawcett Jeffrey, 平川英樹, 松井勝弘, 大田竜也, 安井康夫

日本植物学会第88回大会, Sep 15, 2024, 日本植物学会 Invited
集団遺伝学解析によるソバの伝播・拡散過程の解明

ジェフリフォーセット, 矢﨑裕規, ヤンリウ, ハリエットハント, 竹島亮馬, 大田竜也, マーティンジョーンズ, 安井康夫

日本遺伝学会第９６回大会, Sep 6, 2024, 日本遺伝学会
Genome analyses of Japanese Azuki beans

Tatsuya Ota, Hiroo Nasu

SESJ2024, Aug 22, 2024 Invited
Population genetic analysis reveals the domestication and dispersal history of common buckwheat

Jeffrey A Fawce, Euki Yazaki, Yang Liu, Harriet V Hun, Ryoma Takeshma, Mariko Ueno, Takanori Ohsako, Yumei Dong, Meifang Li, Hideki, Hirakawa, Tatsuya Ota, Chengyun Li, Martin K Jones, Yasuo Yasui

SMBE2024, Jul 10, 2024
日本産アズキのゲノム解析

大田竜也, 那須浩郎

日本育種学会第145回講演会（2024年春季東京大会）, Mar 17, 2024
Hemizygous Genomic Region Controls Distyly in Buckwheat - It Isn't the Classical Super Gene Model -

Yasuo Yasui, Ryoma Takeshima, Jeffrey Fawce, Katsuhiro Matsui, Nobuyuki Mizuno, Daiki Matsumoto, Hideki Hirakawa, Kenta Shirasawa, Tatsuya Ota

Dec 8, 2023
Genetic architecture of heteromorphic self-incompatibility in common buckwheat

Ryoma Takeshima, Jeffrey A. Fawcett, Katsuhiro Matsui, Nobuyuki Mizuno, Daiki Matsumoto, Hideki Hirakawa, Tatsuya Ota, Yasuo Yasui

The 144th annual meeting of the Japanese society of breeding, Sep 17, 2023
Flavonoid biosynthesis and regulatory system revealed by genome sequencing in buckwheat

Katsuhiro Matsui, Yoshimi Oshima, Nobutaka Mitsuda, Shingo Sakamoto, Jeffrey A. Fawcett, Hideki Hirakawa, Tatsuya Ota, Yasuo Yasui

The 144th annual meeting of the Japanese society of breeding, Sep 17, 2023
Development of waxy common buckwheat using NGS-TILLING

Yasuo Yasui, Jeffrey A. Fawcett, Tomoyuki Tanaka, Kazusa Nishimura, Tetsuya Nakazaki, Yu Iwahashi, Hiroki Saito, Naoko Takeuchi, Mariko Ueno, Kenta Shirasawa, Hideki Hirakawa, Tatsuya Ota

The 144th annual meeting of the Japanese society of breeding, Sep 17, 2023
Buckwheat genome project -outline and perspectives -

Tatsuya Ota, Jeffrey A. Fawcett, Ryoma Takeshima, Shinji Kikuchi, Takanori Ohsako, Kenta Shirasawa, Miyu Norizuki, Katsuhiro Matsui, Euki Yazaki, Eri Ogiso, Kenichiro Fujii, Takashi Hara, Martin K. Jones, Hideki Hirakawa, Cheng-Yun Li, Yasuo Yasui

The 144th annual meeting of the Japanese society of breeding, Sep 17, 2023
Genome sequencing reveals the genetic architecture of heterosytly in common buckwheat
Genetics and Genomics of Orphan Crops and their perspectives

Tatsuya Ota,Jeffrey A Fawcett,Ryoma Takeshima,Shinji Kikuchi,Takanori Ohsako,Kenta Shirasawa,Miyu Norizuki,Katsuhiro Matsui,Euki Yazaki,Eri Ogiso-Tanaka,Kenichiro Fujii,Takashi Hara,Martin K Jones,Hideki Hirakawa,Cheng-Yun Li,Yasuo Yasui

25-th annual meeting for the society of evolutionary studies, Japan, Sep 1, 2023 Invited
Visual adaptation to deep Antarctic Ocean in Notothenia species

Misa Osada, Tatsuya Ota, Yohey Terai

25-th annual meeting for the society of evolutionary studies, Japan, Sep 1, 2023
Genome sequencing reveals the genetic architecture of heterosytly in common buckwheat

Jeffrey A Fawcett, Ryoma Takeshima, Shinji Kikuchi, Euki Yazaki, Eri Ogiso-Tanaka, Kenichiro Fujii, Katsuhiro Matsui, Nobuyuki Mizuno, Kazusa Nishimura, Tetsuya Nakazaki, Hiroki Saito, Naoko Takeuchi, Mariko Ueno, Daiki Matsumoto, Miyu Norizuki, Kenta Shirasawa, Hideki Hirakawa, Tatsuya Ota, Yasuo Yasui

Society for Molecular Biology and Evolution 2023, Society for Molecular Biology and Evolution
縄文時代にアズキの種子は大型化したのか？

那須浩郎, 大田竜也

第37回日本植生史学会大会, Oct 2, 2022
ナミアゲハにおける嗅覚受容体（OR）遺伝子の多様性およびその進化

大田竜也, 山上初音, 志賀向子, 木下充代

日本進化学会第２４回沼津大会, 日本進化学会
Domestication process of soybean and azuki bean by Jomon sedentary hunter-gathers in Japanese archipelago

Hiroo Nasu, Seiji Nakayama, Takashi Sano, Tatsuya Ota

The19th conference of the International workgroup for paleoethnobotany
Oligo-FISHプローブによるフツウソバの染色体の識別と核型解析

法月美悠, 菊池真司, 安井康夫, 大田竜也, 平川英樹

第７２回染色体学会
Holosteans contextualize the role of the teleost genome duplication in promoting evolutionary novelty of the ray-finned fish innate immune system

Alex Dornburg, Katerina Zapfe, Emma ferraro, Lindsay Roupe-Abrams, Dustin Wcisel, Andrew Thompson, Ingo Braasch, Tatsuya Ota, Jeffrey Yoder

Society for Molecular Biology and Evolution 2021

Teaching Experience

Works

RESTDATA

大田竜也

1994 Software
DISPAN

大田竜也

1993 Software

Research Projects

先史人類による人為的環境形成（植物相）に関する研究

科学研究費助成事業, 学術変革領域研究(A), 日本学術振興会, Apr, 2023 - Mar, 2028

那須浩郎, 内藤健, 菅裕, 石川亮, 大田竜也
Archaeological and genetic studies on the domestication process of soybean and adzuki bean

Grants-in-Aid for Scientific Research, Grant-in-Aid for Scientific Research (B), Japan Society for the Promotion of Science, Apr, 2021 - Mar, 2025
Mechanism of seed enlargement during the Jomon period

Grants-in-Aid for Scientific Research, Grant-in-Aid for Scientific Research (B), Japan Society for the Promotion of Science, Apr, 2017 - Mar, 2020

Nasu Hiroo
The visual adaptation causes the diversity of species

Grants-in-Aid for Scientific Research, Grant-in-Aid for Scientific Research (C), Japan Society for the Promotion of Science, Apr, 2014 - Mar, 2017

Terai Yohey, Kawata Masakado, Ota Tastuya, Imai Hiroo
Transcriptome analysis of buckwheat stamens to identify the genes involved in heteromorphic self-incompatibility

Grants-in-Aid for Scientific Research, Grant-in-Aid for Scientific Research (C), Japan Society for the Promotion of Science, Apr, 2013 - Mar, 2017

AII JOTARO, YASUI YASUO
Clarification of the genetic basis of the buckwheatself-incompatibility

Grants-in-Aid for Scientific Research, Grant-in-Aid for Scientific Research (C), Japan Society for the Promotion of Science, 2010 - 2012

YASUI Yasuo, MORI Masashi, AII Jotaro, OTA Tatsuya

Committee Memberships

Aug, 2022 - Aug, 2024

理事（国内渉外）, 一般社団法人日本進化学会
Sep, 2020 - Aug, 2022

監事, 一般社団法人日本進化学会
Aug, 2018 - Dec, 2021

Associate Editor, Plant Gene
Nov, 2017 - Aug, 2020

専務理事, 一般社団法人日本進化学会
Aug, 2016 - Dec, 2019

Associate Editor, Agri Gene
2016 - 2018

事務幹事長, 日本進化学会
2008 - 2009

庶務, 日本進化学会
2005 - 2006

会計監査, 日本遺伝学会

Profile Information

Research Interests

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Research History

Professional Memberships

Major Papers

Books and Other Publications

Misc.

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