Daisuke Tsugama

Profile Information

Affiliation: Associate Professor, Asian Natural Environmental Science Center, The University of Tokyo

Degree: Ph.D.(Mar, 2013, The University of Tokyo)

Researcher number: 10726061
J-GLOBAL ID: 201501009390491216
researchmap Member ID: B000249238

Research Interests

Research Areas

Research History

Jan, 2019 - Present

Associate Professor, Asian Natural Environmental Science Center (ANESC), The University of Tokyo
Sep, 2015 - Dec, 2018

Assistant Professor, Research Faculty of Agriculture, Hokkaido University
Apr, 2013 - Aug, 2015

Research Fellow of Japan Society for the Promotion of Science (PD)
May, 2013 - Sep, 2014

Visiting Scholar, Department of Biology, Penn State University
Apr, 2010 - Mar, 2013

Research Fellow of Japan Society for the Promotion of Science (DC1)

Education

Apr, 2010 - Mar, 2013

Department of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo
Apr, 2008 - Mar, 2010

Department of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo
Apr, 2004 - Mar, 2008

The University of Tokyo
Apr, 2001 - Mar, 2004

Utsunomiya High School

Committee Memberships

Apr, 2020 - Present

Managing committee member (for press releases and press conferences), Japanese Society of Breeding
Apr, 2017 - Dec, 2018

Managing committee member, Hokkaido Branch, the Japanese Society of Breeding and Hokkaido Branch, the Crop Science Society of Japan

Awards

Dec, 2019

The University of Tokyo Excellent Young Researcher Award, Promotion of Genomics of Plant Resources, The University of Tokyo

Daisuke Tsugama
Mar, 2017

Presentation award at the 131st JSB meeting, Is the male-specific gene AoMYB35 involved in sex determination in Asparagus officinalis?, Japanese Society of Breeding

Daisuke Tsugama, Kohei Matsuyama, Mayui Ide, Kaien Fujino, Kiyoshi Masuda
Mar, 2017

Award for excellent proposal for research grant, Integrative analysis of the plant mechanosensory signaling mediated by VIP1, Kato Memorial Bioscience Foundation

Daisuke Tsugama
Mar, 2016

Presentation award at the 129th JSB meeting, Isolation and characterization of a candidate sex-determining gene in Asparagus officinalis, Japanese Society of Breeding

Daisuke Tsugama, Masato Hayashi, Kohei Matsuyama, Mayui Ide, Kaien Fujino, Kiyoshi Masuda

Papers

NDR/LATS-family protein kinase genes are indispensable for embryogenesis in Arabidopsis.

Hyuk Sung Yoon, Kaien Fujino, Shenkui Liu, Tetsuo Takano, Daisuke Tsugama

FEBS open bio, 11(9) 2600-2606, Jul 28, 2021
TGIF-DB: terse genomics interface for developing botany.

Daisuke Tsugama, Tetsuo Takano

BMC research notes, 14(1) 181-181, May 13, 2021
Comprehensive analysis of NAC transcription factor family uncovers drought and salinity stress response in pearl millet (Pennisetum glaucum).

Ambika Dudhate, Harshraj Shinde, Pei Yu, Daisuke Tsugama, Shashi Kumar Gupta, Shenkui Liu, Tetsuo Takano

BMC genomics, 22(1) 70-70, Jan 21, 2021
The B″-family subunits of protein phosphatase 2A are necessary for in-vitro dephosphorylation of the Arabidopsis mechanosensory transcription factor VIP1.

Hyuk Sung Yoon, Kaien Fujino, Shenkui Liu, Tetsuo Takano, Daisuke Tsugama

Biochemical and biophysical research communications, 534 353-358, Jan 1, 2021
Biotin plays an important role in Arabidopsis thaliana seedlings under carbonate stress.

Yao Wang, Min Wang, Xiaoxue Ye, Hua Liu, Tetsuo Takano, Daisuke Tsugama, Shenkui Liu, Yuanyuan Bu

Plant science : an international journal of experimental plant biology, 300 110639-110639, Nov, 2020
Developing a tool to shoot genes by a man-made air pressure.

Daisuke Tsugama, Tetsuo Takano

Journal, genetic engineering & biotechnology, 18(1) 48-48, Sep 11, 2020
A GDSL-type esterase/lipase gene, GELP77, is necessary for pollen dissociation and fertility in Arabidopsis.

Daisuke Tsugama, Kaien Fujino, Shenkui Liu, Tetsuo Takano

Biochemical and biophysical research communications, 526(4) 1036-1041, Apr 15, 2020 Peer-reviewed
A putative AGAMOUS ortholog is a candidate for the gene determining ease of dehulling in Tartary buckwheat (Fagopyrum tataricum).

Yuka Fukuie, Hana Shimoyama, Toshikazu Morishita, Daisuke Tsugama, Kaien Fujino

Planta, 251(4) 85-85, Mar 20, 2020 Peer-reviewed
Data of whole genome sequencing of five garden asparagus (Asparagus officinalis) individuals with the MinION nanopore sequencer.

Daisuke Tsugama, Kaien Fujino

Data in brief, 28 104838-104838, Feb, 2020 Peer-reviewed
VIP1, a bZIP protein, interacts with the catalytic subunit of protein phosphatase 2A in Arabidopsis thaliana.

Hyuk Sung Yoon, Kaien Fujino, Shenkui Liu, Tetsuo Takano, Daisuke Tsugama

Plant signaling & behavior, 15(2) 1706026-1706026, 2020 Peer-reviewed
Protein phosphatase 2A regulates the nuclear accumulation of the Arabidopsis bZIP protein VIP1 under hypo-osmotic stress.

Daisuke Tsugama, Hyuk Sung Yoon, Kaien Fujino, Shenkui Liu, Tetsuo Takano

Journal of experimental botany, 70(21) 6101-6112, Nov 18, 2019 Peer-reviewed
Death of female flower microsporocytes progresses independently of meiosis-like process and can be accelerated by specific transcripts in Asparagus officinalis

Ide M, Masuda K, Tsugama D, Fujino K

Scientific Reports, 9(1) 2703-2703, Feb, 2019 Peer-reviewed
Pearl millet stress-responsive NAC transcription factor PgNAC21 enhances salinity stress tolerance in Arabidopsis

Shinde H, Dudhate A, Tsugama D, Gupta SK, Liu S, Takano T

Plant Physiology and Biochemistry, 135 546-553, Feb, 2019 Peer-reviewed
Comparative de novo transcriptomic profiling of the salinity stress responsiveness in contrasting pearl millet lines

Shinde H, Tanaka K, Dudhate A, Tsugama D, Mine Y, Kamiya T, Gupta SK, Liu S, Takano T

Environmental and Experimental Botany, 155 619-627, Nov, 2018 Peer-reviewed
B-family subunits of protein phosphatase 2A are necessary for pollen development but not for female gametophyte development in Arabidopsis

Tsugama D, Liu S, Fujino K, Takano T

Biochemical and Biophysical Research Communications, 505(1) 176-180, Oct, 2018 Peer-reviewed
Possible inhibition of Arabidopsis VIP1-mediated mechanosensory signaling by streptomycin

Tsugama D, Liu S, Fujino K, Takano T

Plant Signaling & Behavior, 13(10) e1521236, Sep, 2018 Peer-reviewed
VIP1 and its homologs are not required for Agrobacterium-mediated transformation, but play a role in Botrytis and salt stress responses.

Lapham R, Lee LY, Tsugama D, Lee S, Mengiste T, Gelvin SB

Frontiers in Plant Science, 9 749, Jun, 2018 Peer-reviewed
Transcriptomic analysis reveals the differentially expressed genes and pathways involved in drought tolerance in pearl millet [pennisetum glaucum (l.) r. Br]

Ambika Dudhate, Harshraj Shinde, Daisuke Tsugama, Shenkui Liu, Tetsuo Takano

PLoS ONE, 13(4) e0195908, Apr 1, 2018 Peer-reviewed
Calcium signalling regulates the functions of the bZIP protein VIP1 in touch responses in Arabidopsis thaliana

Tsugama D, Liu S, Fujino K, Takano T

Annals of Botany, in press(7) 1219-1229, 2018 Peer-reviewed
A putative MYB35 ortholog is a candidate for the sex-determining genes in Asparagus officinalis

Daisuke Tsugama, Kohei Matsuyama, Mayui Ide, Masato Hayashi, Kaien Fujino, Kiyoshi Masuda

SCIENTIFIC REPORTS, 7 41497, Feb, 2017 Peer-reviewed

Misc.

Speciation of interceller localization mechanism of transposase from Antirrhinum mujus

Ohigashi T, Zhou H, Yuasa I, Mitsui S, Koide Y, Tsugama D, Fujino K, Kishima Y

Report of the Hokkaido Branch, the Japanese Society of Breeding and Hokkaido Branch, the Crop Science Society of Japan, 59 2-3, 2018

Professional Memberships

Research Projects

高標高産トドマツはなぜ早熟なのか：マツ科針葉樹における繁殖開始の遺伝的制御に迫る

科学研究費助成事業, 基盤研究(B), 日本学術振興会, Apr, 2023 - Mar, 2026

後藤晋, 北村系子, 津釜大侑, 内山憲太郎, 久本洋子, 津山幾太郎, 種子田春彦
Clarification of apomixis phenomenon and its application by using ASG-1 gene

Grants-in-Aid for Scientific Research, Grant-in-Aid for Scientific Research (C), Japan Society for the Promotion of Science, Apr, 2022 - Mar, 2025
Exploiting the genes regulating ectomycorrhizal formation by using natural variation in Cenococcum geophilum

Grants-in-Aid for Scientific Research, Grant-in-Aid for Scientific Research (B), Japan Society for the Promotion of Science, Apr, 2022 - Mar, 2025
Promotion of the pearl millet genomics with fields and genetic resources in India

Grants-in-Aid for Scientific Research Fund for the Promotion of Joint International Research (Fostering Joint International Research (B)), Fund for the Promotion of Joint International Research (Fostering Joint International Research (B)), Japan Society for the Promotion of Science, Oct, 2019 - Mar, 2025
Ecophysiological and genetic study on effects of arbuscular mycorrhiza on rice growth

Grants-in-Aid for Scientific Research, Grant-in-Aid for Scientific Research (C), Japan Society for the Promotion of Science, Apr, 2020 - Mar, 2023
Study on tolerance mechanisms of pearl millet to environmental stresses

Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (B), Grant-in-Aid for Scientific Research (B), Japan Society for the Promotion of Science, Apr, 2019 - Mar, 2022

Takano Tetsuo
Identification and characterization of novel sex-determining gene candidates for sex-determining genes in Asparagus officinalis

Grants-in-Aid for Scientific Research Grant-in-Aid for Early-Career Scientists, Grant-in-Aid for Early-Career Scientists, Japan Society for the Promotion of Science, Apr, 2019 - Mar, 2022

Daisuke Tsugama
収量に関与する果皮の裂開機構の生理的解析

科学研究費助成事業基盤研究(B), 基盤研究(B), 日本学術振興会, Apr, 2017 - Mar, 2020

藤野介延, 森下敏和, 山田哲也, 津釜大侑
Comprehensive analysis of nutritional components and stress tolerance of quinoa and other Chenopodium plant species

Research Grant, The Japan Prize Foundation, Apr, 2019 - Mar, 2020

Daisuke Tsugama
Integrative analysis of the plant mechanosensory signaling mediated by VIP1

Research Grant, Kato Memorial Bioscience Foundation, Apr, 2017 - Mar, 2019

Daisuke Tsugama
Controling the dioecism of Asparagus officinalis

JSPS Kakenhi Grant for challenging exploratory research, Japan Society for the Promotion of Science (JSPS), Apr, 2016 - Mar, 2019

Daisuke Tsugama
Attempts to identify plant mechanical stress sensors interacting with the nuclear-cytoplasmic shuttling protein VIP1

Grants for research and education, Tokyo Institute of Technology, Apr, 2016 - Mar, 2017

Daisuke Tsugama
Identification of novel interacting partners of NMCP1, a major component of the plant nuclear lamina-like structure

Travel grant, Suginome Kinen Foundation, Jul, 2016 - Jul, 2016

Daisuke Tsugama
Complete elucidation of the VIP1-mediated osmosensory signaling in Arabidopsis

JSPS Grants-in-Aid for Young Scientists, Japan Society for the Promotion of Science (JSPS), Apr, 2013 - Mar, 2016

Daisuke Tsugama
Studies on the iron-sulfur biogenesis for elucidating iron-responsive signaling in rice

JSPS Grants-in-Aid for Young Scientists, Japan Society for the Promotion of Science (JSPS), Apr, 2010 - Mar, 2013

Daisuke Tsugama

Profile Information

Research Interests

Research Areas

Research History

Education

Committee Memberships

Awards

Papers

Misc.

Professional Memberships

Research Projects

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Coauthors