論文

2009年5月

In silico analysis of phosphoproteome data suggests a rich-get-richer process of phosphosite accumulation over evolution

Mol Cell Proteomics
  • Yachie, N
  • ,
  • Saito, R
  • ,
  • Sugahara, J
  • ,
  • Tomita, M
  • ,
  • Ishihama, Y

8
5
開始ページ
1061
終了ページ
71
DOI
10.1074/mcp.M800466-MCP200

Recent phosphoproteome analyses using mass spectrometry-based technologies have provided new insights into the extensive presence of protein phosphorylation in various species and have raised the interesting question of how this protein modification was gained evolutionarily on such a large scale. We investigated this issue by using human and mouse phosphoproteome data. We initially found that phosphoproteins followed a power-law distribution with regard to their number of phosphosites: most of the proteins included only a few phosphosites, but some included dozens of phosphosites. The power-law distribution, unlike more commonly observed distributions such as normal and log-normal distributions, is considered by the field of complex systems science to be produced by a specific rich-get-richer process called preferential attachment growth. Therefore, we explored the factors that may have promoted the rich-get-richer process during phosphosite evolution. We conducted a bioinformatics analysis to evaluate the relationship of amino acid sequences of phosphoproteins with the positions of phosphosites and found an overconcentration of phosphosites in specific regions of protein surfaces

リンク情報
DOI
https://doi.org/10.1074/mcp.M800466-MCP200
URL
https://www.ncbi.nlm.nih.gov/pubmed/19136663
ID情報
  • DOI : 10.1074/mcp.M800466-MCP200
  • ISSN : 1535-9484

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