叶秀彩 (Xiucai YE) - マイポータル

基本情報

所属: 筑波大学システム情報系准教授

J-GLOBAL ID: 201701019433059313
researchmap会員ID: B000273999

研究キーワード

研究分野

情報通信 / 数理情報学 /

経歴

2018年4月 - 2023年12月

筑波大学, システム情報系, 助教
2014年7月 - 2018年3月

筑波大学, システム情報系, 研究員
2014年5月 - 2014年6月

筑波大学, システム情報系, 博士特別研究員
2014年4月 - 2014年6月

筑波大学, システム情報系, 博士特別研究員

学歴

2010年4月 - 2014年3月

筑波大学, システム情報研究科, コンピュータサイエンス専攻

委員歴

2022年6月 - 2023年5月

The 7th International Conference on Medical and Health Informatics, Technical Program Committee
2022年8月 - 2023年2月

The 15th International Conference on Machine Learning and Computing, Technical Program Committee
2022年9月 - 2022年11月

The Thirty-Seven AAAI Conference on Artificial Intelligence, Program Committee
2022年3月 - 2022年6月

Technology in Cancer Research & Treatment Special Issue on Medical Informatics in Precision Medicine, Guest Editor
2022年3月 - 2022年6月

Technology in Cancer Research & Treatment Special Issue on Medical Informatics in Precision Medicine, Guest Editor
2022年3月 - 2022年6月

Technology in Cancer Research & Treatment: Medical Informatics in Precision Medicine (SI), Guest Editor
2022年3月 - 2022年6月

Technology in Cancer Research & Treatment: Medical Informatics in Precision Medicine (SI), Guest Editor
2022年1月 - 2022年5月

Frontiers in Plant Science Special Issue on Machine Learning on Understanding the Epigenetic Mechanisms Underlying Plant Adaptation and Domestication, Guest Editor
2022年1月 - 2022年5月

Frontiers in Plant Science:Machine Learning on Understanding the Epigenetic Mechanisms Underlying Plant Adaptation and ... (SI), Guest Editor
2021年11月 - 2022年5月

2022 IEEE International Conference on Communications (ICC): Cognitive Radio and AI-Enabled Networks, Technical Program Committee
2021年11月 - 2022年5月

2022 IEEE International Conference on Communications (ICC): Cognitive Radio and AI-Enabled Networks, Technical Program Committee
2021年6月 - 2022年5月

The 6th International Conference on Medical and Health Informatics, Technical Program Committee
2021年6月 - 2022年5月

The 6th International Conference on Medical and Health Informatics, Technical Program Committee
2021年11月 - 2022年3月

Computational and Mathematical Methods in Medicine Special Issue on Artificial Intelligence for Biological Sequence and Functional Analysis, Guest Editor
2021年11月 - 2022年3月

Computational and Mathematical Methods in Medicine: Artificial Intelligence for Biological Sequence and Functional Analysis (SI), Guest Editor
2021年8月 - 2022年2月

The 14th International Conference on Machine Learning and Computing, Technical Program Committee
2021年9月 - 2021年11月

The Thirty-Sixth AAAI Conference on Artificial Intelligence, Program Committee
2021年9月 - 2021年11月

The Thirty-Sixth AAAI Conference on Artificial Intelligence, Program Committee
2021年5月 - 2021年11月

The 7th International Symposium on Security and Privacy in Social Networks and Big Data, Program Committee
2021年5月 - 2021年11月

The 7th International Symposium on Security and Privacy in Social Networks and Big Data, Program Committee

もっとみる

受賞

2019年5月

優秀口頭発表賞, ICMHI国際学会の賞

叶秀彩, 李鴻敏, 櫻井鉄也, 熊佩韋
2019年5月

ICMHI国際学会優秀口頭発表賞

叶秀彩, 李鴻敏, 櫻井鉄也, 熊佩韋
2018年10月

優秀論文賞, IEEE CBDCom国際学会の賞, IEEE CBDCom国際学会

叶秀彩, 李鴻敏, 櫻井鉄也, 劉志
2018年10月

IEEE CBDCom国際学会優秀論文賞, IEEE CBDCom国際学会

叶秀彩, 李鴻敏, 櫻井鉄也, 劉志
2017年5月

優秀論文賞, ICMHI国際学会の賞, ICMHI国際学会

叶秀彩, 櫻井鉄也
2017年5月

CMHI国際学会優秀論文賞, ICMHI国際学会

叶秀彩, 櫻井鉄也
2017年2月

優秀口頭発表賞, ICMLC国際学会の賞, ICMLC国際学会

叶秀彩, 櫻井鉄也
2017年2月

ICMLC国際学会優秀口頭発表賞, ICMLC国際学会

叶秀彩, 櫻井鉄也
2016年2月

優秀口頭発表賞, ICMLC国際学会の賞, ICMLC国際学会

叶秀彩, 季凱陽, 櫻井鉄也
2016年2月

ICMLC国際学会優秀口頭発表賞, ICMLC国際学会

叶秀彩, 季凱陽, 櫻井鉄也
2014年3月

筑波大学専攻長表彰賞, 筑波大学

論文

130

Deciphering cancer therapy resistance via patient-level single-cell transcriptomics with CellResDB

Liu, Tianyuan, Qiao, Huiyuan, Ren, Liping, YE, Xiucai, Zou, Quan, Zhang, Yang

Communications biology 8(1) 2025年7月査読有り責任著者
Integration of pre-trained protein language models with equivariant graph neural networks for peptide toxicity prediction

Jiao, Shihu, YE, Xiucai, Sakurai, Tetsuya, Zou, Quan, Han, Wu, Zhan, Chao

BMC Biology 23(1) 2025年7月査読有り責任著者
CSI-FL: Communication-Sensing Integrated Federated Learning Framework for Heterogeneous IoV

Zhang, Jing, Hou, Hongming, Zhang, Meirun, Xu, Li, Ye, Xiucai

IEEE Transactions on Computational Social Systems 2025年6月査読有り
PKAN: Leveraging Kolmogorov-Arnold Networks and Multi-modal Learning for Peptide Prediction with Advanced Language Models.

Wang, Li, Xiangzheng Fu, YE, Xiucai, Sakurai, Tetsuya, Zeng, Xiangxiang, Liu, Yiping

IEEE Journal of Biomedical and Health Informatics 1-10 2025年4月査読有り責任著者
HMAMP: Designing Highly Potent Antimicrobial Peptides Using a Hypervolume-Driven Multiobjective Deep Generative Model

Wang, Li, Liu, Yiping, Fu, Xiangzheng, Ye, Xiucai, Shi, Junfeng, Yen, Gary G., Zou, Quan, Zeng, Xiangxiang, Cao, Dongsheng

Journal of Medicinal Chemistry 68(8) 8346-8360 2025年4月査読有り
Multi-Omics clustering by integrating clinical features from large language model

Xiucai Ye, Tianyi Shi, Dong Huang, Tetsuya Sakurai

Methods 2025年4月
DRL-UPPS: User Trajectory Privacy Protection Strategy Based on Deep Reinforcement Learning in Mobile Crowdsensing

He, Ding, Zhang, Jing, Xu, Li, Liu, Yanhua, Ye, Xiucai

IEEE TRANSACTIONS ON COMPUTATIONAL SOCIAL SYSTEMS 2025年3月査読有り
OmniClust: A versatile clustering toolkit for single-cell and spatial transcriptomics data

Cui, Yaxuan, Cui, Yang, Ding, Yi, Nakai, Kenta, Wei, Leyi, Le, Yuyin, Ye, Xiucai, Sakurai, Tetsuya

Methods 238 84-94 2025年3月査読有り責任著者
Spatio-temporal epidemic forecasting using mobility data with LSTM networks and attention mechanism

Jiao, Shihu, Wang, Yu, Ye, Xiucai, Nagahara, Larry, Sakurai., Tetsuya

Scientific Reports 15(9603) 2025年3月査読有り責任著者
Image-based generation for molecule design with SketchMol

Wang, Zixu, Chen, Yangyang, Ma, Pengsen, Yu, Zhou, Wang, Jianmin, Liu, Yuansheng, Ye, Xiucai, Sakurai, Tetsuya, Zeng, Xiangxiang

NATURE MACHINE INTELLIGENCE Epub 2025年2月査読有り
MultiCycPermea: accurate and interpretable prediction of cyclic peptide permeability using a multimodal image-sequence model

Wang, Zixu, Chen, Yangyang, Shang, Yifan, Yang, Xiulong, Pan, Wenqiong, Ye, Xiucai, Sakurai, Tetsuya, Zeng, Xiangxiang

BMC Biology 23(63) 2025年2月査読有り責任著者
Robust feature learning using contractive autoencoders for multi-omics clustering in cancer subtyping

Guo, Mengke, Ye, Xiucai, Huang, Dong, Sakurai, Tetsuya

METHODS 233 52-60 2025年1月査読有り
Selecting interpretable features for cancer subtyping on multi-omics data

Tianyi Shi, Xiucai Ye, Dong Huang, Tetsuya Sakurai

2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) 1155-1160 2024年12月3日
Integrating Biological Language Processing and Memory Attention Model for Protein-DNA Binding Residue Prediction

Guan, Shixuan, Ye, Xiucai, Sakurai, Tetsuya

Proceedings of IEEE International Conference on Bioinformatics and Biomedicine (BIBM) 25-30 2024年12月査読有り責任著者
Lightweight privacy-preserving authenticated key agreements using physically unclonable functions for internet of drones

Lee, Tian-Fu, Ye, Xiucai, Huang, Wei-Jie

JOURNAL OF INFORMATION SECURITY AND APPLICATIONS 87 2024年12月査読有り
PCDP-CRLPPM: a classified regional location privacy-protection model based on personalized clustering with differential privacy in data management

Shi, Wenlong, Zhang, Jing, Chen, Xiaoping, Ye, Xiucai

The Computer Journal 68(4) 372-396 2024年11月査読有り
DTS-AdapSTNet: an adaptive spatiotemporal neural networks for traffic prediction with multi-graph fusion

Shi, Wenlong, Zhang, Jing, Zhong, Xiangxuan, Chen, Xiaoping, Ye, Xiucai

PEERJ COMPUTER SCIENCE 10 2024年11月査読有り
Cancer subtype identification by multi-omics clustering based on interpretable feature and latent subspace learning

Shi, Tianyi, Ye, Xiucai, Huang, Dong, Sakurai, Tetsuya

METHODS 231 144-153 2024年11月査読有り責任著者
An interpretable deep learning model predicts RNA-small molecule binding sites

Xi, Wenyu, Wang, Ruheng, Wang, Li, Ye, Xiucai, Liu, Mingyang, Sakurai, Tetsuya

FUTURE GENERATION COMPUTER SYSTEMS-THE INTERNATIONAL JOURNAL OF ESCIENCE 159 557-566 2024年10月査読有り責任著者
Identification of Spatial Domains, Spatially Variable Genes, and Genetic Association Studies of Alzheimer Disease with an Autoencoder-based Fuzzy Clustering Algorithm

Cui, Yaxuan, Wei, Leyi, Wang, Ruheng, Ye, Xiucai, Sakurai, Tetsuya

CURRENT BIOINFORMATICS 19(8) 765-776 2024年10月査読有り

もっとみる

講演・口頭発表等

STlinear: A linear denoising algorithm for spatial domain identification in spatial transcriptomics

Cui, Yaxuan, Cui, Yang, Wang, Ruheng, YE, Xiucai, Sakurai, Tetsuya

The 20th World Congress on Medical and Health Informatics (MedInfo 2025)
Deep Feature Learning for Multi-Omics Clustering Using Supervised Variational Autoencoders with Clinical Information

Shi, Tianyi, YE, Xiucai, Sakurai, Tetsuya

International Joint Conference on Neural Networks (IJCNN2025)
A Memory Attention-Driven Framework with Biological Language Embedding for Predicting Protein-DNA Binding Residues

Guan, Shixuan, YE, Xiucai, Sakurai, Tetsuya

The 9th International Conference on Medical and Health Informatics (ICMHI 2025)
Improved Efficiency and Interpretability for Peptide Prediction Based on Kolmogorov–Arnold Networks and Multi-scale Features

Wang, Li, YE, Xiucai, Sakurai, Tetsuya

The 9th International Conference on Medical and Health Informatics (ICMHI 2025)
Multi-Omics Clustering with Large Language Model-Based Feature Extraction

Shi, Tianyi, YE, Xiucai, Sakurai, Tetsuya

The 9th International Conference on Medical and Health Informatics (ICMHI 2025)
A Capsule Network-Based Model for Predicting RNA-Small Molecule Binding Sites

Xi, Wenyu, YE, Xiucai, Sakurai, Tetsuya

The 9th International Conference on Medical and Health Informatics (ICMHI 2025)
Multi-omics Data Clustering for Cancer Subtyping via Interpretable Feature Extraction

Shi, Tianyi, Ye, Xiucai, Sakurai, Tetsuya

International Conference on Machine Learning and Computing (ICMLC 2025)
Selecting interpretable features for cancer subtyping on multi-omics data

Shi, Tianyi, Ye, Xiucai, Huang, Dong, Sakurai, Tetsuya

IEEE International Conference on Bioinformatics and Biomedicine (BIBM)
Deciphering the Complex Characterization of Coding LncRNA

Liu, Tianyuan, Ye, Xiucai, Sakurai, Tetsuya

International Joint Conference on Neural Networks (IJCNN2024)
CyclePermea: Membrane Permeability Prediction of Cyclic Peptides with a Multi-Loss Fusion Network

Wang, Zixu, Chen, Yangyang, Ye, Xiucai, Sakurai, Tetsuya

International Joint Conference on Neural Networks (IJCNN2024)
CPPM: Prediction of cyclic peptide membrane permeability based on multi-loss fusion network

Chen, Yangyang, Ye, Xiucai, Sakurai, Tetsuya

The 8th International Conference on Medical and Health Informatics (ICMHI 2024)
Stgan: Imputation algorithm for spatial transcriptomics based on Generative Adversarial Network

Cui, Yaxuan, Ye, Xiucai, Sakurai, Tetsuya

The 8th International Conference on Medical and Health Informatics (ICMHI 2024)
Hierarchical Deep Learning Architecture for Predicting Protein-DNA Binding Sites

Guan, Shixuan, Ye, Xiucai, Sakurai, Tetsuya

The 8th International Conference on Medical and Health Informatics (ICMHI 2024)
Exploring Peptide Toxicity Prediction for Intelligent Drug Discovery Using Deep Learning

Jiao, Shihu, Ye, Xiucai, Sakurai, Tetsuya

The 8th International Conference on Medical and Health Informatics (ICMHI 2024)
Opportunities and Challenges: A New Perspective in Functional Diversity of Coding LncRNA and Their Micropeptides

Liu, Tianyuan, Ye, Xiucai, Sakurai, Tetsuya

The 8th International Conference on Medical and Health Informatics (ICMHI 2024)
Multi-omics Clustering for Cancer Subtyping Based on SHAP Values

Shi, Tianyi, Ye, Xiucai, Sakurai, Tetsuya

The 8th International Conference on Medical and Health Informatics (ICMHI 2024)
Multi-omics clustering based on interpretable and discriminative features for cancer subtyping

Shi, Tianyi, Ye, Xiucai, Sakurai, Tetsuya

IEEE International Conference on Bioinformatics and Biomedicine (BIBM)
Multi-view Network Embedding with Structure and Semantic Contrastive Learning

Shang, Yifan, Ye, Xiucai, Sakurai, Tetsuya

IEEE International Conference on Multimedia and Expo (ICME2023)
Common and Unique Features Learning in Multi-view Network Embedding

Yifan, Shang, Xiucai, Ye, Tetsuya, Sakurai

International Joint Conference on Neural Networks (IJCNN2023)
Improving Prediction of SARS CoV2 Phosphorylation Sites Using Adaptive Learning Embedding Features

Jiao, Shihu, Ye, Xiucai, Sakurai, Tetsuya

The 7th International Conference on Medical and Health Informatics (ICMHI 2023)

もっとみる

所属学協会

2018年12月 - 現在

AAAI
2017年4月 - 現在

CBEES
2014年1月 - 現在

IEEE

共同研究・競争的資金等の研究課題

制約付き固有値問題に基づく局所潜在空間生成とその大規模分散データ解析への応用

日本学術振興会科学研究費助成事業基盤研究(B) 2023年4月 - 2028年3月

櫻井鉄也, 二村保徳, 今倉暁, 叶秀彩, BOGDANOVA ANNA
制約付き固有値問題に基づく局所潜在空間生成とその大規模分散データ解析への応用

日本学術振興会科学研究費助成事業基盤研究(B) 2023年4月 - 2028年3月

櫻井鉄也, 今倉暁, 二村保徳, 叶秀彩, BOGDANOVA ANNA

産業財産権

特願2019-104396 特徴量選択支援装置、特徴量選択支援プログラム及び特徴量選択支援方法

今倉, 暁, 叶, 秀彩, 櫻井, 鉄也

叶秀彩

基本情報

研究キーワード

研究分野

経歴

学歴

委員歴

受賞

論文

講演・口頭発表等

所属学協会

共同研究・競争的資金等の研究課題

産業財産権

メニュー

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