論文

2021年12月8日

Development of a nucleic acid chromatography assay for the detection of commonly isolated rapidly growing mycobacteria

Journal of Medical Microbiology
  • Yuriko Igarashi
  • Kinuyo Chikamatsu
  • Sotaro Sano
  • Shigehiko Miyamoto
  • Akio Aono
  • Asami Osugi
  • Yuta Morishige
  • Yoshiro Murase
  • Hiroyuki Yamada
  • Akiko Takaki
  • Satoshi Mitarai
  • 全て表示

70
12
記述言語
掲載種別
研究論文(学術雑誌)
DOI
10.1099/jmm.0.001464
出版者・発行元
Microbiology Society

<bold>Introduction.</bold> Non-tuberculosis mycobacterium infections are increasing worldwide, including those caused by rapidly growing mycobacteria (RGM).



<bold>Gap Statement.</bold> The identification of the aetiological agent in the context of infections is essential for the adoption of an adequate therapeutic approach. However, the methods for the rapid distinction of different RGM species are less than optimal.



<bold>Aim.</bold> To develop a nucleic acid chromatography kit to identify clinically common RGM.



<bold>Methodology.</bold> We tried to develop a nucleic acid chromatography kit designed to detect four RGM species (including three subspecies) i.e. <italic>
<named-content content-type="subspecies">
<ext-link xmlns:xlink="http://www.w3.org/1999/xlink" ext-link-type="uri" xlink:href="http://doi.org/10.1601/nm.22536" xlink:type="simple">Mycobacterium abscessus</ext-link>
</named-content>
</italic> subsp. <italic>
<named-content content-type="subspecies">
<ext-link xmlns:xlink="http://www.w3.org/1999/xlink" ext-link-type="uri" xlink:href="http://doi.org/10.1601/nm.22536" xlink:type="simple">abscessus</ext-link>
</named-content>
</italic>, <italic>
<named-content content-type="subspecies">
<ext-link xmlns:xlink="http://www.w3.org/1999/xlink" ext-link-type="uri" xlink:href="http://doi.org/10.1601/nm.22535" xlink:type="simple">Mycobacterium abscessus</ext-link>
</named-content>
</italic> subsp. <italic>
<named-content content-type="subspecies">
<ext-link xmlns:xlink="http://www.w3.org/1999/xlink" ext-link-type="uri" xlink:href="http://doi.org/10.1601/nm.22535" xlink:type="simple">bolletii</ext-link>
</named-content>
</italic> (detected as <italic>M. abscessus/bolletii</italic>) <italic>
<named-content content-type="subspecies">
<ext-link xmlns:xlink="http://www.w3.org/1999/xlink" ext-link-type="uri" xlink:href="http://doi.org/10.1601/nm.29179" xlink:type="simple">Mycobacterium abscessus</ext-link>
</named-content>
</italic> subsp. <italic>
<named-content content-type="subspecies">
<ext-link xmlns:xlink="http://www.w3.org/1999/xlink" ext-link-type="uri" xlink:href="http://doi.org/10.1601/nm.29179" xlink:type="simple">massiliense</ext-link>
</named-content>
</italic>, <italic>
<named-content content-type="species">
<ext-link xmlns:xlink="http://www.w3.org/1999/xlink" ext-link-type="uri" xlink:href="http://doi.org/10.1601/nm.10882" xlink:type="simple">Mycobacterium fortuitum</ext-link>
</named-content>
</italic>, <italic>
<named-content content-type="species">
<ext-link xmlns:xlink="http://www.w3.org/1999/xlink" ext-link-type="uri" xlink:href="http://doi.org/10.1601/nm.10881" xlink:type="simple">Mycobacterium chelonae</ext-link>
</named-content>
</italic> and <italic>
<named-content content-type="species">
<ext-link xmlns:xlink="http://www.w3.org/1999/xlink" ext-link-type="uri" xlink:href="http://doi.org/10.1601/nm.6390" xlink:type="simple">Mycobacterium peregrinum</ext-link>
</named-content>
</italic>. The amplified target genes for each species/subspecies using multiplex PCR were analysed using a nucleic acid chromatography assay.



<bold>Results.</bold> Among the 159 mycobacterial type strains and 70 RGM clinical isolates tested, the developed assay correctly identified all relevant RGM without any cross-reactivity or false-negatives. The limits of detection for each species were approximately 0.2 pg µl-1.



<bold>Conclusion.</bold> The rapid and simple nucleic acid chromatography method developed here, which does not involve heat denaturation, may contribute to the rapid identification and treatment of RGM infections.

リンク情報
DOI
https://doi.org/10.1099/jmm.0.001464
URL
https://www.microbiologyresearch.org/content/journal/jmm/10.1099/jmm.0.001464?crawler=true
ID情報
  • DOI : 10.1099/jmm.0.001464
  • ISSN : 0022-2615
  • eISSN : 1473-5644

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