Yasushige Yonezawa

J-GLOBAL         Last updated: Jan 6, 2020 at 11:02
Yasushige Yonezawa

Research Interests


Research Areas


Published Papers

Mutational effects of Cys113 on structural dynamics of Pin1
Teikichi Ikura, Yasushige Yonezawa, and Nobutoshi Ito
Biophysics and Physicobiology   16 452-465   Sep 2019   [Refereed]
Loosening of side-chain packing associated with perturbations in peripheral dynamics induced by the D76N mutation of β2-microglobulin revealed by pressure-NMR and molecular dynamic simulations
Kazumasa Sakurai, Ryosuke Tomiyama, Takuma Shiraki, Yasushige Yonezawa
Biomolecules   9(9) 491   Sep 2019   [Refereed]
Autoencoder-based detection of dynamic allostery triggered by ligand binding based on molecular dynamics
Y Tsuchiya, K Taneishi, Y Yonezawa
Journal of chemical information and modeling      Aug 2019   [Refereed]
Allosteric Activation of Cytochrome P450 3A4 by Efavirenz Facilitates Midazolam Binding
Tomohiko Ichikawa, Hirofumi Tsujino, Takahiro Miki, Masaya Kobayashi,Chiaki Matsubara, Sara Miyata, Taku Yamashita, Kohei Takeshita, Yasushige Yonezawa & Tadayuki Uno
Xenobiotica   1-10   Dec 2018   [Refereed]
Naoyuki Miyashita, Yasushige Yonezawa
Journal of Chemical physics   147 124108   Sep 2017   [Refereed]
Free Energy Reconstruction from Logarithmic Mean-Force Dynamics Using Multiple Nonequilibrium Trajectories
Tooro Morishita, Yasushige Yonezawa
Journal of Chemical Theory and Computation   13(7)    Aug 2017   [Refereed]
Free Energy Reconstruction from Logarithmic Mean-Force Dynamics Using Multiple Nonequilibrium Trajectories
T. Morishita , Y. Yonezawa, and A. M. Ito
13(7) 3106-3119   Jun 2017   [Refereed]
Tsutomu Nakamuraa, Yasushige Yonezawa, Yuko Tsuchiya, Mayumi Niiyama, Kurumi Ida, Maki Oshima, Junji Morita, Koichi Uegaki
Journal of Structural Biology   195(3) 286-293   Sep 2016   [Refereed]
Yasushige Yonezawa
Journal of Computational Chemistry   37(13) 1139-1146   Jun 2016   [Refereed]
Yu Takano, Kazuto Nakata, Yasushige Yonezawa, and Haruki Nakamura
Journal of Computational Chemistry   37(12) 1125-1132   May 2016   [Refereed]
Yasushige Yonezawa
THE JOURNAL OF BIOLOGICAL CHEMISTRY   291(11) 5935-5947   Jan 2016   [Refereed]
Yasushige Yonezawa
Chemical Physic Letter   556 308-314   Aug 2013   [Refereed]
Ikuo Fukuda, Narutoshi Kamiya, Yasushige Yonezawa, and Haruki Nakamura
J. Chem. Phys.   137 054314   Jul 2012   [Refereed]
Yasushige Yonezawa
J. Chem. Phys.   136 244103   May 2012   [Refereed]
Effective computation method of dynamic elecrostatic effects of the explicit solvent and membrane molecules from molecular dynamics simulations
Yasushige Yonezawa
178-182   Nov 2011   [Refereed]
Jurnal of Computational Chemistry,   32 1286-1297   Apr 2011   [Refereed]
Electronic structures of a [4Fe?4S] cluster, [Fe4S4(SCH3)3(CH3COO)], in dark-operative protochlorophyllide oxidoreductase (DPOR)
Chem. Phys. Lett.   501 598-602   Mar 2011
Journal of Chemical Physics   134(024) 109   Jan 2011   [Refereed]
Journal of Chemical Physics   133(135) 101   2011   [Refereed]
A resonating broken symmetry configuration interaction approach for double-exchange magnetic systems
J. Phys. Condens. Matter   21 64227-64423   2011   [Refereed]
Reconstruction of 2D Free-energy Landscape of Protein from Multiscale Simulation
JSBi2010      Dec 2010   [Refereed]
Study on the Free Energy Landscape of Alanine-dimer peptide in Explicit Water using the Force-switching Wolf Method
JSBi2010      Dec 2010   [Refereed]
Biochemistry   48 5864-5873   Nov 2009   [Refereed]
Polyhedron   28(9-10) 1628-1633   Jul 2009   [Refereed]
Verifying trivial parallelization of multicanonical molecular dynamics for conformational sampling of a polypeptide in explicit water
Chem. Phys. Lett.   15(30) 110-118   Apr 2009   [Refereed]
Journal of the Physical Society of Japan   77(11) 14301-14305   May 2008
Opal OP: An Extensible Grid-Enabling Wrapping Approach for Legacy Apprications
3rd Workshop on Grid Computing & Applications (GCA2007)      Jun 2007   [Refereed]
FEBS Letters   580(26) 6199-6205   Sep 2006   [Refereed]
Chemical Physics Letters   428(1-3) 73-77   May 2006   [Refereed]
S. Fujiwara, F. Matsumoto, Y. Yonezawa,
J. Mol. Biol.   331(1) 21-28   Jul 2003   [Refereed]
Y. Yonezawa, S. Tanaka, T. Kubota, K. Wakabayashi, K. Yutani, *S. Fujiwara,
J. Mol. Biol.   323(2) 237-251   May 2002   [Refereed]
Neutron Crystallography of Hen Egg-White Lysozyme at pH4.9.
M. Maeda, S. Fujiwara, Y. Yonezawa, *N. Niimura.
J. Phy. Soc. Jpn Suppl. A.   403-405   Nov 2001   [Refereed]
Denaturation and Aggregation of Hen Egg Lysozyme in Aqueous Ethanol Solution Studied by Dynamic Light Scattering.
S. Tanaka, Y. Oda, M. Ataka, K. Onuma, S. Fujiwara, Y. Yonezawa.
Biopolymers   59(5) 370-379   Oct 2001   [Refereed]
Yasushige Yonezawa
Physics Letters B   501 183-190   May 2001   [Refereed]
S. Fujiwara , Y. Yonezawa
J. of Phy. and Chem. of Solids.   60 1393-1395   Nov 1999   [Refereed]
Precise Measurement of the total hadronic cross section in e+e- annihilation at √s = 57.77 GeV.
Yasushige Yonezawa
Phys.Lett.B   477 167-177   May 1999   [Refereed]
Yasushige Yonezawa
Phys. Rev. D   57 5345-5362   Nov 1998   [Refereed]
Yasushige Yonezawa
Phys. Rev.Lett.   81 2428-2431   Sep 1998   [Refereed]
S. Fujiwara, Y. Karasawa, I. Tanaka, Y. Minezaki, Y. Yonezawa, N. Niimura
Physica B   207 241-243   May 1998   [Refereed]
Yasushige Yonezawa
Phys. Lett. B   403 155-162   Oct 1997   [Refereed]
Measurement of the charged multiplicity of bottom and light quark events in e+e- annihilation at √s=58GeV.
Yasushige Yonezawa
Phys. Lett.B   423 185-192   Jul 1997   [Refereed]
Yasushige Yonezawa
Phys. Lett.B   407 185-192   Jul 1997   [Refereed]
Yasushige Yonezawa
Z. Phys. C   75 209-214   Jun 1997   [Refereed]
Yasushige Yonezawa
Phys. Rev. D   55 19-39   Jun 1997   [Refereed]
Study of Inclusive Baryon-Antibaryon Pair Production of p or Λin Two Photon Processes.
Yasushige Yonezawa
Z. Phys. C   69 597-606   Jul 1996   [Refereed]
Yasushige Yonezawa
J. Phys. Soc. Jpn.   64    Aug 1995   [Refereed]
Kaonic Hydrogen X-ray Experiment at KEK.
M. Iwasaki, K.Barlett, G.A.Beer, D.R.Gill, R.S.Hayano, T.M.Ito, L.Lee, F.E.Maas, G.Mason, S.N.Nakamura, A.Olin, H.Outa, M.salomon, R.Seki, T.Taniguchi, T.P.Terada, G.Trayling, E.Widmann, Y.Yamashita, S.Yen and Y.Yonezawa.
Nuclear Physics A   585 239-246   Aug 1995   [Refereed]
Yasushige Yonezawa
Z. Phys.C   63 213-218   Aug 1994   [Refereed]
Yasushige Yonezawa
Phys. Lev. Lett.   72 3313-3316   Aug 1994   [Refereed]
Yasushige Yonezawa
Phys. Lett. B   331 211-216   Jul 1994   [Refereed]
Yasushige Yonezawa
Phys.Lett. B   302 119-124   Sep 1993   [Refereed]
Yasushige Yonezawa
Phys. Lett. B   313 288-298   Aug 1993   [Refereed]
T.Oshima, H.Sakamoto, J. Shirai and T. Tsukamoto, Y. Sugaya, K. Takahashi, T. Suzuki, C. Rosenfeld and S. Wilson, K. Ueno, Y. Yonezawa, H. Kawakami, S. Kato, S. Shibata and K. Ukai.
Phys.Rev.D   47(11) 4840-4856   Jun 1993   [Refereed]
Yasushige Yonezawa
Phys. Rev. Lett.   71 38-41   May 1993   [Refereed]
Yasushige Yonezawa
Phys.Lett. B   313 245-252   May 1993   [Refereed]
Yasushige Yonezawa
Phys.Lett. B   278 393-398   Sep 1992   [Refereed]
High sensitivity search for a 17keV neutrino. Nagative indication with an upper limit of 0.095%.
H. Kawakami, S. Sato, C. Rosenfeld, H. Sakamoto, T. Sato, S. Shibata, J. Shirai, T. Suzuki, K. Takahashi, T. Tsukamoto, K. Ueno, K. Ukai, S. Wilson and Y. Yonezawa
Phys.Lett.B   287 45-50   Jul 1992   [Refereed]
Measurement of the reactions e+e- → μ+μ- and e+e- → τ+τ- between at √s= 50 and 60.8 GeV.
Yasushige Yonezawa
Z. Phys. C   48 13   Sep 1991   [Refereed]
Yasushige Yonezawa
Phys. Lett. B   267 309-316   Jul 1991   [Refereed]
Study of the e+e- → μ+μ-γ Reaction at Center-of-Mass Energies between 54 and 64 GeV.
Yasushige Yonezawa
Phys. Lett.B   264 212-218   Jul 1991   [Refereed]
Yasushige Yonezawa
Phys. Rev. Lett   66 280   Apr 1991   [Refereed]
Search for χc2 Production in Two-Photon Processes.
Yasushige Yonezawa
Phys. Lett. B   266 188-192   Mar 1991   [Refereed]
Determination of the QCD Scale Parameter ΛMZ with QCD Cascade on the Basis of the Next-to-leading Logarithmic Approximation.
Yasushige Yonezawa
Phys. Lett. B   240 232   Jun 1990   [Refereed]
Search for SUSY-Partners of Charged Leptons in e+e- Collisions with √s up to 60.8 GeV.
Yasushige Yonezawa
Phys. Lett. B   234 202   May 1990   [Refereed]
Experimental limits on extra-Z bosons from e+e- annihilation data with the VENUS detector at √s = 50-64 GeV.
Yasushige Yonezawa
Phys. Lett. B   246 297   Apr 1990   [Refereed]
A Study on Single Photon Production √s = 54.0 - 61.4 GeV.
Yasushige Yonezawa
Phys. Lett. B   232 431   Aug 1989   [Refereed]
Yasushige Yonezawa
J. Phys. Soc. Jpn.   58 3037   Aug 1989   [Refereed]
Yasushige Yonezawa
Phys. Rev. D.   39(3)    Aug 1989   [Refereed]

Conference Activities & Talks

On-the-fly determination of averaged structure of proteins and the analyses using Baysian inference method
Yasushige Yonezawa
27 Jun 2018