論文

査読有り
2012年6月

Ice-binding site of snow mold fungus antifreeze protein deviates from structural regularity and high conservation

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
  • Hidemasa Kondo
  • ,
  • Yuichi Hanada
  • ,
  • Hiroshi Sugimoto
  • ,
  • Tamotsu Hoshino
  • ,
  • Christopher P. Garnham
  • ,
  • Peter L. Davies
  • ,
  • Sakae Tsuda

109
24
開始ページ
9360
終了ページ
9365
記述言語
英語
掲載種別
研究論文(学術雑誌)
DOI
10.1073/pnas.1121607109
出版者・発行元
NATL ACAD SCIENCES

Antifreeze proteins (AFPs) are found in organisms ranging from fish to bacteria, where they serve different functions to facilitate survival of their host. AFPs that protect freeze-intolerant fish and insects from internal ice growth bind to ice using a regular array of well-conserved residues/motifs. Less is known about the role of AFPs in freeze-tolerant species, which might be to beneficially alter the structure of ice in or around the host. Here we report the 0.95-angstrom high-resolution crystal structure of a 223-residue secreted AFP from the snow mold fungus Typhula ishikariensis. Its main structural element is an irregular beta-helix with six loops of 18 or more residues that lies alongside an alpha-helix. beta-Helices have independently evolved as AFPs on several occasions and seem ideally structured to bind to several planes of ice, including the basal plane. A novelty of the beta-helical fold is the nonsequential arrangement of loops that places the N- and C termini inside the solenoid of beta-helical coils. The ice-binding site (IBS), which could not be predicted from sequence or structure, was located by site-directed mutagenesis to the flattest surface of the protein. It is remarkable for its lack of regularity and its poor conservation in homologs from psychrophilic diatoms and bacteria and other fungi.

リンク情報
DOI
https://doi.org/10.1073/pnas.1121607109
PubMed
https://www.ncbi.nlm.nih.gov/pubmed/22645341
Web of Science
https://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=JSTA_CEL&SrcApp=J_Gate_JST&DestLinkType=FullRecord&KeyUT=WOS:000305511300037&DestApp=WOS_CPL
ID情報
  • DOI : 10.1073/pnas.1121607109
  • ISSN : 0027-8424
  • PubMed ID : 22645341
  • Web of Science ID : WOS:000305511300037

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