論文

査読有り
2001年2月

Crystal structures of substrate free and complex forms of reactivated BphC, an extradiol type ring-cleavage dioxygenase

JOURNAL OF INORGANIC BIOCHEMISTRY
  • Y Uragami
  • ,
  • T Senda
  • ,
  • K Sugimoto
  • ,
  • N Sato
  • ,
  • Nagarajan, V
  • ,
  • E Masai
  • ,
  • M Fukuda
  • ,
  • Y Mitsui

83
4
開始ページ
269
終了ページ
279
記述言語
英語
掲載種別
研究論文(学術雑誌)
DOI
10.1016/S0162-0134(00)00172-0
出版者・発行元
ELSEVIER SCIENCE INC

BphC derived from Pseudomonas sp. strain KKS 102, an extradiol type catecholic dioxygenase. is a non-beam iron-containing enzyme. playing an important role in the degradation of biphenyl/PCB (Poly Chlorinated Biphenyls) in the microbe. Although we had earlier solved the crystal structure of KKS102 BphC, it was the inactive form with Fe(III) in the active site. In order to determine the active form structure, BphC was re-activated by anaerobic incubation with Fe(II) and ascorbate. and crystallized anaerobically. The crystal structures of activated BphC and its substrate complex (E.S complex) were determined at 2.0 Angstrom resolution under cryogenic condition. In addition. crystal structures of unactivated BphC in substrate free and complex forms were also re-determined. Comparison of activated and unactivated E.S complexes reveals that the orientation of the bound substrate in the active site is significantly different between the two. The structural comparison of the substrate free and complex forms of activated BphC show certain small conformational shifts around the active site upon substrate binding. As a result of the conformational shifts, His194, which has been suggested as the catalytic base, takes part in a weak hydrogen bond with hydroxyl group of the substrate. (C) 2001 Elsevier Science B.V. All rights reserved.

リンク情報
DOI
https://doi.org/10.1016/S0162-0134(00)00172-0
PubMed
https://www.ncbi.nlm.nih.gov/pubmed/11293547
Web of Science
https://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=JSTA_CEL&SrcApp=J_Gate_JST&DestLinkType=FullRecord&KeyUT=WOS:000167802800006&DestApp=WOS_CPL
ID情報
  • DOI : 10.1016/S0162-0134(00)00172-0
  • ISSN : 0162-0134
  • PubMed ID : 11293547
  • Web of Science ID : WOS:000167802800006

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